RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 NUP155O75694 1391 aa29.2■■■□□ 2.26
PTPN18-207ENST00000462321 YEATS2Q9ULM3 1422 aa29.18■■■□□ 2.26
PTPN18-207ENST00000462321 SLC4A1APQ9BWU0 796 aaKnown RBP29.15■■■□□ 2.26
PTPN18-207ENST00000462321 DEPDC5O75140 1603 aa29.14■■■□□ 2.26
PTPN18-207ENST00000462321 FAM135AQ9P2D6 1515 aa29.12■■■□□ 2.25
PTPN18-207ENST00000462321 IQGAP3Q86VI3 1631 aa29.11■■■□□ 2.25
PTPN18-207ENST00000462321 BCORL1Q5H9F3 1711 aa29.1■■■□□ 2.25
PTPN18-207ENST00000462321 KIF3BO15066 747 aa29.09■■■□□ 2.25
PTPN18-207ENST00000462321 ATP10AO60312 1499 aa29.09■■■□□ 2.25
PTPN18-207ENST00000462321 PRDM15P57071 1507 aaPredicted RBP29.08■■■□□ 2.25
PTPN18-207ENST00000462321 ARHGEF40Q8TER5 1519 aa29.08■■■□□ 2.25
PTPN18-207ENST00000462321 REREQ9P2R6 1566 aa29.08■■■□□ 2.25
PTPN18-207ENST00000462321 RNF17Q9BXT8 1623 aaKnown RBP29.07■■■□□ 2.24
PTPN18-207ENST00000462321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.07■■■□□ 2.24
PTPN18-207ENST00000462321 MROH1Q8NDA8 1641 aa29.05■■■□□ 2.24
PTPN18-207ENST00000462321 VWDEQ8N2E2 1590 aa29.04■■■□□ 2.24
PTPN18-207ENST00000462321 PKD2Q13563 968 aa29.03■■■□□ 2.24
PTPN18-207ENST00000462321 KANK1Q14678 1352 aa29.03■■■□□ 2.24
PTPN18-207ENST00000462321 ANKRD30BQ9BXX2 1392 aa29■■■□□ 2.23
PTPN18-207ENST00000462321 FOXD1Q16676 465 aa29■■■□□ 2.23
PTPN18-207ENST00000462321 AGLP35573 1532 aa28.98■■■□□ 2.23
PTPN18-207ENST00000462321 SIN3AQ96ST3 1273 aa28.97■■■□□ 2.23
PTPN18-207ENST00000462321 LMTK2Q8IWU2 1503 aa28.94■■■□□ 2.22
PTPN18-207ENST00000462321 TET3O43151 1660 aa28.92■■■□□ 2.22
PTPN18-207ENST00000462321 GGT6Q6P531 493 aa28.91■■■□□ 2.22
PTPN18-207ENST00000462321 NEUROD1Q13562 356 aa28.9■■■□□ 2.22
PTPN18-207ENST00000462321 TIMELESSQ9UNS1 1208 aa28.88■■■□□ 2.21
PTPN18-207ENST00000462321 RPRD2Q5VT52 1461 aaKnown RBP28.86■■■□□ 2.21
PTPN18-207ENST00000462321 ABCC3O15438 1527 aa28.86■■■□□ 2.21
PTPN18-207ENST00000462321 EFCAB6Q5THR3 1501 aa28.86■■■□□ 2.21
PTPN18-207ENST00000462321 SIGLEC1Q9BZZ2 1709 aa28.86■■■□□ 2.21
PTPN18-207ENST00000462321 E9PCH4 1651 aa28.85■■■□□ 2.21
PTPN18-207ENST00000462321 CEP152O94986 1710 aa28.83■■■□□ 2.21
PTPN18-207ENST00000462321 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
PTPN18-207ENST00000462321 WASHC2CQ9Y4E1 1318 aa28.82■■■□□ 2.2
PTPN18-207ENST00000462321 TONSLQ96HA7 1378 aa28.81■■■□□ 2.2
PTPN18-207ENST00000462321 PLA2R1Q13018 1463 aa28.8■■■□□ 2.2
PTPN18-207ENST00000462321 PPP6R1Q9UPN7 881 aa28.8■■■□□ 2.2
PTPN18-207ENST00000462321 PTPRTO14522 1441 aa28.77■■■□□ 2.2
PTPN18-207ENST00000462321 CAMSAP1Q5T5Y3 1602 aa28.76■■■□□ 2.19
PTPN18-207ENST00000462321 CCDC144AA2RUR9 1427 aa28.75■■■□□ 2.19
PTPN18-207ENST00000462321 TRPM2O94759 1503 aa28.75■■■□□ 2.19
PTPN18-207ENST00000462321 NPATQ14207 1427 aa28.74■■■□□ 2.19
PTPN18-207ENST00000462321 ARHGAP31Q2M1Z3 1444 aa28.73■■■□□ 2.19
PTPN18-207ENST00000462321 SPHKAPQ2M3C7 1700 aa28.73■■■□□ 2.19
PTPN18-207ENST00000462321 ARID4BQ4LE39 1312 aaPredicted RBP28.7■■■□□ 2.18
PTPN18-207ENST00000462321 MLECQ14165 292 aa28.67■■■□□ 2.18
PTPN18-207ENST00000462321 CNTLNQ9NXG0 1405 aa28.64■■■□□ 2.18
PTPN18-207ENST00000462321 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
PTPN18-207ENST00000462321 L3MBTL2Q969R5 705 aa28.63■■■□□ 2.17
PTPN18-207ENST00000462321 NOS1P29475 1434 aa28.62■■■□□ 2.17
PTPN18-207ENST00000462321 CLTCQ00610 1675 aaKnown RBP28.62■■■□□ 2.17
PTPN18-207ENST00000462321 CLTCL1P53675 1640 aa28.61■■■□□ 2.17
PTPN18-207ENST00000462321 ESF1Q9H501 851 aaKnown RBP28.58■■■□□ 2.17
PTPN18-207ENST00000462321 SPATA31E1Q6ZUB1 1445 aa28.55■■■□□ 2.16
PTPN18-207ENST00000462321 NEURL4Q96JN8 1562 aa28.54■■■□□ 2.16
PTPN18-207ENST00000462321 UGGT1Q9NYU2 1555 aa28.54■■■□□ 2.16
PTPN18-207ENST00000462321 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
PTPN18-207ENST00000462321 SYNMO15061 1565 aa28.53■■■□□ 2.16
PTPN18-207ENST00000462321 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
PTPN18-207ENST00000462321 MROH2AA6NES4 1674 aa28.51■■■□□ 2.15
PTPN18-207ENST00000462321 ZMYM3Q14202 1370 aa28.5■■■□□ 2.15
PTPN18-207ENST00000462321 PIK3C2BO00750 1634 aa28.49■■■□□ 2.15
PTPN18-207ENST00000462321 SPATA31D1Q6ZQQ2 1576 aa28.49■■■□□ 2.15
PTPN18-207ENST00000462321 CFAP65Q6ZU64 1925 aaKnown RBP28.46■■■□□ 2.15
PTPN18-207ENST00000462321 SLC52A1Q9NWF4 448 aa28.46■■■□□ 2.15
PTPN18-207ENST00000462321 RGL3Q3MIN7 710 aa28.45■■■□□ 2.14
PTPN18-207ENST00000462321 FBXO31Q5XUX0 539 aaPredicted RBP28.45■■■□□ 2.14
PTPN18-207ENST00000462321 ADGRB3O60242 1522 aa28.44■■■□□ 2.14
PTPN18-207ENST00000462321 FER1L4A9Z1Z3 1794 aa28.44■■■□□ 2.14
PTPN18-207ENST00000462321 UHRF1BP1Q6BDS2 1440 aa28.44■■■□□ 2.14
PTPN18-207ENST00000462321 KIF1BO60333 1816 aa28.44■■■□□ 2.14
PTPN18-207ENST00000462321 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
PTPN18-207ENST00000462321 NBPF8Q3BBV2 869 aa28.38■■■□□ 2.13
PTPN18-207ENST00000462321 IDI1Q13907 227 aa28.38■■■□□ 2.13
PTPN18-207ENST00000462321 STAC3Q96MF2 364 aa28.37■■■□□ 2.13
PTPN18-207ENST00000462321 KDM2AQ9Y2K7 1162 aa28.36■■■□□ 2.13
PTPN18-207ENST00000462321 ADAMTSL3P82987 1691 aa28.35■■■□□ 2.13
PTPN18-207ENST00000462321 MADDQ8WXG6 1647 aa28.35■■■□□ 2.13
PTPN18-207ENST00000462321 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
PTPN18-207ENST00000462321 CHGAP10645 457 aaKnown RBP28.33■■■□□ 2.13
PTPN18-207ENST00000462321 C3P01024 1663 aa28.33■■■□□ 2.13
PTPN18-207ENST00000462321 TNRQ92752 1358 aa28.33■■■□□ 2.13
PTPN18-207ENST00000462321 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
PTPN18-207ENST00000462321 MYOM2P54296 1465 aa28.31■■■□□ 2.12
PTPN18-207ENST00000462321 TMEM131LA2VDJ0 1609 aa28.3■■■□□ 2.12
PTPN18-207ENST00000462321 RALGAPBQ86X10 1494 aa28.3■■■□□ 2.12
PTPN18-207ENST00000462321 RPGRIP1LQ68CZ1 1315 aa28.29■■■□□ 2.12
PTPN18-207ENST00000462321 IFT172Q9UG01 1749 aa28.28■■■□□ 2.12
PTPN18-207ENST00000462321 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
PTPN18-207ENST00000462321 CEBPAP49715 358 aaPredicted RBP28.26■■■□□ 2.12
PTPN18-207ENST00000462321 ZNF316A6NFI3 1004 aaPredicted RBP28.25■■■□□ 2.11
PTPN18-207ENST00000462321 NLRP1Q9C000 1473 aa28.23■■■□□ 2.11
PTPN18-207ENST00000462321 TRPM1Q7Z4N2 1603 aa28.23■■■□□ 2.11
PTPN18-207ENST00000462321 PPLO60437 1756 aa28.22■■■□□ 2.11
PTPN18-207ENST00000462321 NEXMIFQ5QGS0 1516 aa28.22■■■□□ 2.11
PTPN18-207ENST00000462321 NRXN1Q9ULB1 1477 aa28.22■■■□□ 2.11
PTPN18-207ENST00000462321 A2ML1A8K2U0 1454 aa28.21■■■□□ 2.11
PTPN18-207ENST00000462321 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
PTPN18-207ENST00000462321 KDM5AP29375 1690 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms