RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
ABCA4-202ENST00000460514 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
ABCA4-202ENST00000460514 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
ABCA4-202ENST00000460514 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
ABCA4-202ENST00000460514 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
ABCA4-202ENST00000460514 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
ABCA4-202ENST00000460514 MBD5Q9P267 1494 aa11.48□□□□□ -0.57
ABCA4-202ENST00000460514 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
ABCA4-202ENST00000460514 KDM6BO15054 1643 aa11.46□□□□□ -0.57
ABCA4-202ENST00000460514 ARHGEF12Q9NZN5 1544 aa11.46□□□□□ -0.57
ABCA4-202ENST00000460514 SHANK2Q9UPX8 1470 aa11.46□□□□□ -0.57
ABCA4-202ENST00000460514 DAPK1P53355 1430 aa11.46□□□□□ -0.57
ABCA4-202ENST00000460514 ABCC5O15440 1437 aa11.45□□□□□ -0.58
ABCA4-202ENST00000460514 TRAPPC8Q9Y2L5 1435 aa11.45□□□□□ -0.58
ABCA4-202ENST00000460514 SPAG9O60271 1321 aaKnown RBP11.45□□□□□ -0.58
ABCA4-202ENST00000460514 AFAP1Q8N556 730 aa11.45□□□□□ -0.58
ABCA4-202ENST00000460514 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
ABCA4-202ENST00000460514 RICTORQ6R327 1708 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 CROCC2H7BZ55 1655 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 ITGAEP38570 1179 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 KDM5CP41229 1560 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
ABCA4-202ENST00000460514 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
ABCA4-202ENST00000460514 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
ABCA4-202ENST00000460514 MAST1Q9Y2H9 1570 aa11.43□□□□□ -0.58
ABCA4-202ENST00000460514 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
ABCA4-202ENST00000460514 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
ABCA4-202ENST00000460514 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
ABCA4-202ENST00000460514 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
ABCA4-202ENST00000460514 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
ABCA4-202ENST00000460514 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
ABCA4-202ENST00000460514 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
ABCA4-202ENST00000460514 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
ABCA4-202ENST00000460514 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
ABCA4-202ENST00000460514 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
ABCA4-202ENST00000460514 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
ABCA4-202ENST00000460514 INO80Q9ULG1 1556 aaPredicted RBP11.4□□□□□ -0.58
ABCA4-202ENST00000460514 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.59
ABCA4-202ENST00000460514 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
ABCA4-202ENST00000460514 PLXNC1O60486 1568 aa11.38□□□□□ -0.59
ABCA4-202ENST00000460514 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
ABCA4-202ENST00000460514 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
ABCA4-202ENST00000460514 NCOA1Q15788 1441 aa11.37□□□□□ -0.59
ABCA4-202ENST00000460514 KIDINS220Q9ULH0 1771 aa11.37□□□□□ -0.59
ABCA4-202ENST00000460514 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
ABCA4-202ENST00000460514 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
ABCA4-202ENST00000460514 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
ABCA4-202ENST00000460514 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
ABCA4-202ENST00000460514 RRP7BPQ9NSQ0 103 aa11.35□□□□□ -0.59
ABCA4-202ENST00000460514 ATP10AO60312 1499 aa11.35□□□□□ -0.59
ABCA4-202ENST00000460514 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
ABCA4-202ENST00000460514 DIP2CQ9Y2E4 1556 aa11.34□□□□□ -0.59
ABCA4-202ENST00000460514 A2MP01023 1474 aa11.34□□□□□ -0.59
ABCA4-202ENST00000460514 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
ABCA4-202ENST00000460514 ABCA6Q8N139 1617 aa11.34□□□□□ -0.59
ABCA4-202ENST00000460514 YEATS2Q9ULM3 1422 aa11.34□□□□□ -0.59
ABCA4-202ENST00000460514 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
ABCA4-202ENST00000460514 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
ABCA4-202ENST00000460514 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
ABCA4-202ENST00000460514 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
ABCA4-202ENST00000460514 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
ABCA4-202ENST00000460514 NAIPQ13075 1403 aa11.32□□□□□ -0.6
ABCA4-202ENST00000460514 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
ABCA4-202ENST00000460514 ANKRD50Q9ULJ7 1429 aa11.32□□□□□ -0.6
ABCA4-202ENST00000460514 EIF2AK4Q9P2K8 1649 aaKnown RBP11.3□□□□□ -0.6
ABCA4-202ENST00000460514 AGLP35573 1532 aa11.3□□□□□ -0.6
ABCA4-202ENST00000460514 KIF3BO15066 747 aa11.28□□□□□ -0.6
ABCA4-202ENST00000460514 HRCP23327 699 aa11.28□□□□□ -0.6
ABCA4-202ENST00000460514 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
ABCA4-202ENST00000460514 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
ABCA4-202ENST00000460514 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
ABCA4-202ENST00000460514 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
ABCA4-202ENST00000460514 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
ABCA4-202ENST00000460514 KANK1Q14678 1352 aa11.26□□□□□ -0.61
ABCA4-202ENST00000460514 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
ABCA4-202ENST00000460514 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
ABCA4-202ENST00000460514 TRIM52Q96A61 297 aa11.24□□□□□ -0.61
ABCA4-202ENST00000460514 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
ABCA4-202ENST00000460514 GGT6Q6P531 493 aa11.23□□□□□ -0.61
ABCA4-202ENST00000460514 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
ABCA4-202ENST00000460514 FAM135AQ9P2D6 1515 aa11.23□□□□□ -0.61
ABCA4-202ENST00000460514 UNC13BO14795 1591 aa11.23□□□□□ -0.61
ABCA4-202ENST00000460514 DEPDC5O75140 1603 aa11.22□□□□□ -0.61
ABCA4-202ENST00000460514 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
ABCA4-202ENST00000460514 NUP155O75694 1391 aa11.21□□□□□ -0.61
ABCA4-202ENST00000460514 MLECQ14165 292 aa11.21□□□□□ -0.61
ABCA4-202ENST00000460514 KDM5DQ9BY66 1539 aa11.2□□□□□ -0.62
ABCA4-202ENST00000460514 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
ABCA4-202ENST00000460514 CNTLNQ9NXG0 1405 aa11.19□□□□□ -0.62
ABCA4-202ENST00000460514 ZC3H13Q5T200 1668 aaKnown RBP11.19□□□□□ -0.62
ABCA4-202ENST00000460514 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
ABCA4-202ENST00000460514 IQGAP3Q86VI3 1631 aa11.18□□□□□ -0.62
ABCA4-202ENST00000460514 MROH1Q8NDA8 1641 aa11.18□□□□□ -0.62
ABCA4-202ENST00000460514 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
ABCA4-202ENST00000460514 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
ABCA4-202ENST00000460514 VWDEQ8N2E2 1590 aa11.17□□□□□ -0.62
ABCA4-202ENST00000460514 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
ABCA4-202ENST00000460514 ABCC3O15438 1527 aa11.16□□□□□ -0.62
ABCA4-202ENST00000460514 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms