RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 ALKQ9UM73 1620 aa11.59□□□□□ -0.55
THUMPD2-203ENST00000460072 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
THUMPD2-203ENST00000460072 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
THUMPD2-203ENST00000460072 PRDM15P57071 1507 aaPredicted RBP11.57□□□□□ -0.56
THUMPD2-203ENST00000460072 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
THUMPD2-203ENST00000460072 STRCP1A6NGW2 1772 aa11.57□□□□□ -0.56
THUMPD2-203ENST00000460072 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
THUMPD2-203ENST00000460072 ABCC3O15438 1527 aa11.56□□□□□ -0.56
THUMPD2-203ENST00000460072 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
THUMPD2-203ENST00000460072 MED1Q15648 1581 aaPredicted RBP11.56□□□□□ -0.56
THUMPD2-203ENST00000460072 MLECQ14165 292 aa11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 CEP152O94986 1710 aa11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 SLIT1O75093 1534 aa11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 SOCS7O14512 581 aa11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 CEBPAP49715 358 aaPredicted RBP11.55□□□□□ -0.56
THUMPD2-203ENST00000460072 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
THUMPD2-203ENST00000460072 LMTK2Q8IWU2 1503 aa11.53□□□□□ -0.56
THUMPD2-203ENST00000460072 ARHGAP31Q2M1Z3 1444 aa11.53□□□□□ -0.56
THUMPD2-203ENST00000460072 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
THUMPD2-203ENST00000460072 DUOX2Q9NRD8 1548 aa11.52□□□□□ -0.57
THUMPD2-203ENST00000460072 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
THUMPD2-203ENST00000460072 MIA2Q96PC5 1412 aa11.52□□□□□ -0.57
THUMPD2-203ENST00000460072 NWD1Q149M9 1564 aa11.51□□□□□ -0.57
THUMPD2-203ENST00000460072 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
THUMPD2-203ENST00000460072 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
THUMPD2-203ENST00000460072 TNRQ92752 1358 aa11.51□□□□□ -0.57
THUMPD2-203ENST00000460072 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
THUMPD2-203ENST00000460072 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
THUMPD2-203ENST00000460072 ERBINQ96RT1 1412 aa11.48□□□□□ -0.57
THUMPD2-203ENST00000460072 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
THUMPD2-203ENST00000460072 DISP3Q9P2K9 1392 aa11.47□□□□□ -0.57
THUMPD2-203ENST00000460072 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
THUMPD2-203ENST00000460072 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.57
THUMPD2-203ENST00000460072 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
THUMPD2-203ENST00000460072 HNRNPMP52272 730 aaKnown RBP eCLIP11.44□□□□□ -0.58
THUMPD2-203ENST00000460072 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
THUMPD2-203ENST00000460072 LRRC7Q96NW7 1537 aa11.44□□□□□ -0.58
THUMPD2-203ENST00000460072 GCC2Q8IWJ2 1684 aa11.44□□□□□ -0.58
THUMPD2-203ENST00000460072 PIK3C2BO00750 1634 aa11.43□□□□□ -0.58
THUMPD2-203ENST00000460072 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
THUMPD2-203ENST00000460072 ILDR2Q71H61 639 aa11.42□□□□□ -0.58
THUMPD2-203ENST00000460072 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
THUMPD2-203ENST00000460072 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
THUMPD2-203ENST00000460072 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
THUMPD2-203ENST00000460072 ADGRB3O60242 1522 aa11.41□□□□□ -0.58
THUMPD2-203ENST00000460072 TET3O43151 1660 aa11.41□□□□□ -0.58
THUMPD2-203ENST00000460072 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
THUMPD2-203ENST00000460072 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
THUMPD2-203ENST00000460072 EFCAB6Q5THR3 1501 aa11.41□□□□□ -0.58
THUMPD2-203ENST00000460072 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.59
THUMPD2-203ENST00000460072 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.59
THUMPD2-203ENST00000460072 UNC13BO14795 1591 aa11.39□□□□□ -0.59
THUMPD2-203ENST00000460072 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
THUMPD2-203ENST00000460072 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
THUMPD2-203ENST00000460072 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
THUMPD2-203ENST00000460072 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
THUMPD2-203ENST00000460072 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
THUMPD2-203ENST00000460072 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
THUMPD2-203ENST00000460072 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
THUMPD2-203ENST00000460072 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
THUMPD2-203ENST00000460072 NOS1P29475 1434 aa11.35□□□□□ -0.59
THUMPD2-203ENST00000460072 TOM1O60784 492 aa11.34□□□□□ -0.59
THUMPD2-203ENST00000460072 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
THUMPD2-203ENST00000460072 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
THUMPD2-203ENST00000460072 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
THUMPD2-203ENST00000460072 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
THUMPD2-203ENST00000460072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.33□□□□□ -0.6
THUMPD2-203ENST00000460072 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
THUMPD2-203ENST00000460072 GGT6Q6P531 493 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 ABCC5O15440 1437 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 DAPK1P53355 1430 aa11.32□□□□□ -0.6
THUMPD2-203ENST00000460072 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
THUMPD2-203ENST00000460072 KIF3BO15066 747 aa11.31□□□□□ -0.6
THUMPD2-203ENST00000460072 LAMC1P11047 1609 aa11.3□□□□□ -0.6
THUMPD2-203ENST00000460072 AHDC1Q5TGY3 1603 aaPredicted RBP11.3□□□□□ -0.6
THUMPD2-203ENST00000460072 PHLPP1O60346 1717 aa11.28□□□□□ -0.6
THUMPD2-203ENST00000460072 COL16A1Q07092 1604 aaPredicted RBP11.28□□□□□ -0.6
THUMPD2-203ENST00000460072 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
THUMPD2-203ENST00000460072 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
THUMPD2-203ENST00000460072 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
THUMPD2-203ENST00000460072 ZFYVE9O95405 1425 aa11.27□□□□□ -0.6
THUMPD2-203ENST00000460072 FGD6Q6ZV73 1430 aa11.27□□□□□ -0.6
THUMPD2-203ENST00000460072 KIF15Q9NS87 1388 aa11.27□□□□□ -0.61
THUMPD2-203ENST00000460072 XRN1Q8IZH2 1706 aaKnown RBP11.27□□□□□ -0.61
THUMPD2-203ENST00000460072 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
THUMPD2-203ENST00000460072 E9PCH4 1651 aa11.26□□□□□ -0.61
THUMPD2-203ENST00000460072 HSPA1LP34931 641 aa11.26□□□□□ -0.61
THUMPD2-203ENST00000460072 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
THUMPD2-203ENST00000460072 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
THUMPD2-203ENST00000460072 KANK1Q14678 1352 aa11.24□□□□□ -0.61
THUMPD2-203ENST00000460072 PIK3R4Q99570 1358 aa11.23□□□□□ -0.61
THUMPD2-203ENST00000460072 SETBP1Q9Y6X0 1596 aa11.23□□□□□ -0.61
THUMPD2-203ENST00000460072 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
THUMPD2-203ENST00000460072 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
THUMPD2-203ENST00000460072 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms