RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
THUMPD2-203ENST00000460072 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
THUMPD2-203ENST00000460072 ABCC9O60706 1549 aa16.46■□□□□ 0.22
THUMPD2-203ENST00000460072 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
THUMPD2-203ENST00000460072 NACADO15069 1562 aa15.92■□□□□ 0.14
THUMPD2-203ENST00000460072 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
THUMPD2-203ENST00000460072 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
THUMPD2-203ENST00000460072 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
THUMPD2-203ENST00000460072 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
THUMPD2-203ENST00000460072 BICRAQ9NZM4 1560 aa15.52■□□□□ 0.08
THUMPD2-203ENST00000460072 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
THUMPD2-203ENST00000460072 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
THUMPD2-203ENST00000460072 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
THUMPD2-203ENST00000460072 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
THUMPD2-203ENST00000460072 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
THUMPD2-203ENST00000460072 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
THUMPD2-203ENST00000460072 CECR2Q9BXF3 1484 aa14.97□□□□□ -0.01
THUMPD2-203ENST00000460072 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
THUMPD2-203ENST00000460072 CUX2O14529 1486 aa14.62□□□□□ -0.07
THUMPD2-203ENST00000460072 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
THUMPD2-203ENST00000460072 NCAPD3P42695 1498 aa14.58□□□□□ -0.07
THUMPD2-203ENST00000460072 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
THUMPD2-203ENST00000460072 SMARCA2P51531 1590 aa14.52□□□□□ -0.09
THUMPD2-203ENST00000460072 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
THUMPD2-203ENST00000460072 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
THUMPD2-203ENST00000460072 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
THUMPD2-203ENST00000460072 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
THUMPD2-203ENST00000460072 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
THUMPD2-203ENST00000460072 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
THUMPD2-203ENST00000460072 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
THUMPD2-203ENST00000460072 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
THUMPD2-203ENST00000460072 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
THUMPD2-203ENST00000460072 WDR62O43379 1518 aa14.14□□□□□ -0.15
THUMPD2-203ENST00000460072 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
THUMPD2-203ENST00000460072 NESP48681 1621 aa14.13□□□□□ -0.15
THUMPD2-203ENST00000460072 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
THUMPD2-203ENST00000460072 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
THUMPD2-203ENST00000460072 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
THUMPD2-203ENST00000460072 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
THUMPD2-203ENST00000460072 WIZO95785 1651 aa13.97□□□□□ -0.17
THUMPD2-203ENST00000460072 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
THUMPD2-203ENST00000460072 CFTRP13569 1480 aa13.91□□□□□ -0.18
THUMPD2-203ENST00000460072 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
THUMPD2-203ENST00000460072 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
THUMPD2-203ENST00000460072 WDR97A6NE52 1622 aa13.77□□□□□ -0.21
THUMPD2-203ENST00000460072 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
THUMPD2-203ENST00000460072 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
THUMPD2-203ENST00000460072 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
THUMPD2-203ENST00000460072 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
THUMPD2-203ENST00000460072 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
THUMPD2-203ENST00000460072 RIMBP3CA6NJZ7 1639 aa13.66□□□□□ -0.22
THUMPD2-203ENST00000460072 RIMBP3BA6NNM3 1639 aa13.66□□□□□ -0.22
THUMPD2-203ENST00000460072 RIMBP3Q9UFD9 1639 aa13.66□□□□□ -0.22
THUMPD2-203ENST00000460072 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
THUMPD2-203ENST00000460072 EIF4G3O43432 1585 aaKnown RBP13.63□□□□□ -0.23
THUMPD2-203ENST00000460072 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
THUMPD2-203ENST00000460072 CHD1O14646 1710 aa13.59□□□□□ -0.23
THUMPD2-203ENST00000460072 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
THUMPD2-203ENST00000460072 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
THUMPD2-203ENST00000460072 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
THUMPD2-203ENST00000460072 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
THUMPD2-203ENST00000460072 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
THUMPD2-203ENST00000460072 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
THUMPD2-203ENST00000460072 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
THUMPD2-203ENST00000460072 MAGI1Q96QZ7 1491 aaPredicted RBP13.41□□□□□ -0.26
THUMPD2-203ENST00000460072 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
THUMPD2-203ENST00000460072 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
THUMPD2-203ENST00000460072 ABCA5Q8WWZ7 1642 aa13.37□□□□□ -0.27
THUMPD2-203ENST00000460072 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
THUMPD2-203ENST00000460072 CUX1P39880 1505 aa13.32□□□□□ -0.28
THUMPD2-203ENST00000460072 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
THUMPD2-203ENST00000460072 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
THUMPD2-203ENST00000460072 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
THUMPD2-203ENST00000460072 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
THUMPD2-203ENST00000460072 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
THUMPD2-203ENST00000460072 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
THUMPD2-203ENST00000460072 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
THUMPD2-203ENST00000460072 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.282e-8■■■■■ 42.3
THUMPD2-203ENST00000460072 SOGA1O94964 1423 aa13.25□□□□□ -0.29
THUMPD2-203ENST00000460072 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
THUMPD2-203ENST00000460072 RAD54L2Q9Y4B4 1467 aa13.22□□□□□ -0.29
THUMPD2-203ENST00000460072 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
THUMPD2-203ENST00000460072 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
THUMPD2-203ENST00000460072 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
THUMPD2-203ENST00000460072 NUP160Q12769 1436 aa13.16□□□□□ -0.3
THUMPD2-203ENST00000460072 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
THUMPD2-203ENST00000460072 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
THUMPD2-203ENST00000460072 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
THUMPD2-203ENST00000460072 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
THUMPD2-203ENST00000460072 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
THUMPD2-203ENST00000460072 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
THUMPD2-203ENST00000460072 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
THUMPD2-203ENST00000460072 CUL7Q14999 1698 aa13.02□□□□□ -0.33
THUMPD2-203ENST00000460072 CYB5RLQ6IPT4 315 aa13.02□□□□□ -0.33
THUMPD2-203ENST00000460072 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
THUMPD2-203ENST00000460072 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
THUMPD2-203ENST00000460072 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
THUMPD2-203ENST00000460072 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
THUMPD2-203ENST00000460072 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
THUMPD2-203ENST00000460072 FBLN2P98095 1184 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms