RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
SCFD1-203ENST00000458591 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
SCFD1-203ENST00000458591 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
SCFD1-203ENST00000458591 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
SCFD1-203ENST00000458591 PTPRGP23470 1445 aa19.03■□□□□ 0.64
SCFD1-203ENST00000458591 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
SCFD1-203ENST00000458591 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
SCFD1-203ENST00000458591 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.63
SCFD1-203ENST00000458591 EXOC6Q8TAG9 804 aa19.01■□□□□ 0.63
SCFD1-203ENST00000458591 CDCA7LQ96GN5 454 aa19.01■□□□□ 0.63
SCFD1-203ENST00000458591 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
SCFD1-203ENST00000458591 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
SCFD1-203ENST00000458591 RALBP1Q15311 655 aa19■□□□□ 0.63
SCFD1-203ENST00000458591 BRD4O60885 1362 aaPredicted RBP19■□□□□ 0.63
SCFD1-203ENST00000458591 SAMD9LQ8IVG5 1584 aa19■□□□□ 0.63
SCFD1-203ENST00000458591 PLA2R1Q13018 1463 aa18.98■□□□□ 0.63
SCFD1-203ENST00000458591 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
SCFD1-203ENST00000458591 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
SCFD1-203ENST00000458591 CCDC144AA2RUR9 1427 aa18.97■□□□□ 0.63
SCFD1-203ENST00000458591 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
SCFD1-203ENST00000458591 DISP3Q9P2K9 1392 aa18.97■□□□□ 0.63
SCFD1-203ENST00000458591 RRP1P56182 461 aaKnown RBP18.96■□□□□ 0.63
SCFD1-203ENST00000458591 NBR1Q14596 966 aa18.95■□□□□ 0.62
SCFD1-203ENST00000458591 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
SCFD1-203ENST00000458591 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
SCFD1-203ENST00000458591 TESK2Q96S53 571 aa18.94■□□□□ 0.62
SCFD1-203ENST00000458591 PANK3Q9H999 370 aa18.94■□□□□ 0.62
SCFD1-203ENST00000458591 CDC42BPBQ9Y5S2 1711 aa18.94■□□□□ 0.62
SCFD1-203ENST00000458591 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
SCFD1-203ENST00000458591 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
SCFD1-203ENST00000458591 ARHGEF5Q12774 1597 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 PLIN1O60240 522 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 RCAN3Q9UKA8 241 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 A2MP01023 1474 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
SCFD1-203ENST00000458591 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
SCFD1-203ENST00000458591 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
SCFD1-203ENST00000458591 E9PCH4 1651 aa18.9■□□□□ 0.62
SCFD1-203ENST00000458591 TRPM1Q7Z4N2 1603 aa18.9■□□□□ 0.62
SCFD1-203ENST00000458591 ARHGAP5Q13017 1502 aa18.89■□□□□ 0.61
SCFD1-203ENST00000458591 TTC37Q6PGP7 1564 aa18.88■□□□□ 0.61
SCFD1-203ENST00000458591 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
SCFD1-203ENST00000458591 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
SCFD1-203ENST00000458591 RSPH4AQ5TD94 716 aa18.86■□□□□ 0.61
SCFD1-203ENST00000458591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
SCFD1-203ENST00000458591 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
SCFD1-203ENST00000458591 IPO9Q96P70 1041 aaKnown RBP18.84■□□□□ 0.61
SCFD1-203ENST00000458591 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
SCFD1-203ENST00000458591 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
SCFD1-203ENST00000458591 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.61
SCFD1-203ENST00000458591 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.6
SCFD1-203ENST00000458591 DEKP35659 375 aaKnown RBP18.82■□□□□ 0.6
SCFD1-203ENST00000458591 TMF1P82094 1093 aa18.81■□□□□ 0.6
SCFD1-203ENST00000458591 ADAMTS8Q9UP79 889 aa18.81■□□□□ 0.6
SCFD1-203ENST00000458591 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
SCFD1-203ENST00000458591 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
SCFD1-203ENST00000458591 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
SCFD1-203ENST00000458591 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
SCFD1-203ENST00000458591 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
SCFD1-203ENST00000458591 UNC13BO14795 1591 aa18.78■□□□□ 0.6
SCFD1-203ENST00000458591 PDE4AP27815 886 aa18.76■□□□□ 0.59
SCFD1-203ENST00000458591 MAGI2Q86UL8 1455 aa18.75■□□□□ 0.59
SCFD1-203ENST00000458591 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
SCFD1-203ENST00000458591 TRAPPC8Q9Y2L5 1435 aa18.75■□□□□ 0.59
SCFD1-203ENST00000458591 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
SCFD1-203ENST00000458591 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
SCFD1-203ENST00000458591 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
SCFD1-203ENST00000458591 IQGAP3Q86VI3 1631 aa18.73■□□□□ 0.59
SCFD1-203ENST00000458591 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
SCFD1-203ENST00000458591 TCERG1O14776 1098 aaKnown RBP18.71■□□□□ 0.59
SCFD1-203ENST00000458591 CHD1O14646 1710 aa18.71■□□□□ 0.59
SCFD1-203ENST00000458591 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
SCFD1-203ENST00000458591 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
SCFD1-203ENST00000458591 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
SCFD1-203ENST00000458591 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
SCFD1-203ENST00000458591 BACH2Q9BYV9 841 aa18.7■□□□□ 0.58
SCFD1-203ENST00000458591 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
SCFD1-203ENST00000458591 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
SCFD1-203ENST00000458591 WDR7Q9Y4E6 1490 aa18.69■□□□□ 0.58
SCFD1-203ENST00000458591 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
SCFD1-203ENST00000458591 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
SCFD1-203ENST00000458591 PLCH2O75038 1416 aa18.68■□□□□ 0.58
SCFD1-203ENST00000458591 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
SCFD1-203ENST00000458591 ABCC2Q92887 1545 aa18.67■□□□□ 0.58
SCFD1-203ENST00000458591 ATP10AO60312 1499 aa18.66■□□□□ 0.58
SCFD1-203ENST00000458591 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCFD1-203ENST00000458591 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
SCFD1-203ENST00000458591 LAMC1P11047 1609 aa18.65■□□□□ 0.58
SCFD1-203ENST00000458591 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
SCFD1-203ENST00000458591 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
SCFD1-203ENST00000458591 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
SCFD1-203ENST00000458591 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
SCFD1-203ENST00000458591 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
SCFD1-203ENST00000458591 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
SCFD1-203ENST00000458591 MADDQ8WXG6 1647 aa18.6■□□□□ 0.57
SCFD1-203ENST00000458591 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
SCFD1-203ENST00000458591 MS4A1P11836 297 aa18.59■□□□□ 0.57
SCFD1-203ENST00000458591 SLC4A3P48751 1232 aa18.59■□□□□ 0.57
SCFD1-203ENST00000458591 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms