RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 SOX12O15370 315 aa17.41■□□□□ 0.38
KCNMA1-216ENST00000457953 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
KCNMA1-216ENST00000457953 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
KCNMA1-216ENST00000457953 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
KCNMA1-216ENST00000457953 TMF1P82094 1093 aa17.4■□□□□ 0.38
KCNMA1-216ENST00000457953 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
KCNMA1-216ENST00000457953 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
KCNMA1-216ENST00000457953 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
KCNMA1-216ENST00000457953 POGKQ9P215 609 aa17.39■□□□□ 0.37
KCNMA1-216ENST00000457953 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
KCNMA1-216ENST00000457953 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
KCNMA1-216ENST00000457953 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
KCNMA1-216ENST00000457953 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-216ENST00000457953 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-216ENST00000457953 AFAP1Q8N556 730 aa17.35■□□□□ 0.37
KCNMA1-216ENST00000457953 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
KCNMA1-216ENST00000457953 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
KCNMA1-216ENST00000457953 PLIN1O60240 522 aa17.34■□□□□ 0.37
KCNMA1-216ENST00000457953 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.37
KCNMA1-216ENST00000457953 IFT140Q96RY7 1462 aa17.33■□□□□ 0.37
KCNMA1-216ENST00000457953 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.37
KCNMA1-216ENST00000457953 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
KCNMA1-216ENST00000457953 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
KCNMA1-216ENST00000457953 KIAA0586Q9BVV6 1533 aa17.32■□□□□ 0.36
KCNMA1-216ENST00000457953 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
KCNMA1-216ENST00000457953 KDM6BO15054 1643 aa17.31■□□□□ 0.36
KCNMA1-216ENST00000457953 KIAA0556O60303 1618 aa17.31■□□□□ 0.36
KCNMA1-216ENST00000457953 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
KCNMA1-216ENST00000457953 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
KCNMA1-216ENST00000457953 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-216ENST00000457953 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-216ENST00000457953 TAOK2Q9UL54 1235 aa17.3■□□□□ 0.36
KCNMA1-216ENST00000457953 DAPK1P53355 1430 aa17.29■□□□□ 0.36
KCNMA1-216ENST00000457953 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
KCNMA1-216ENST00000457953 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
KCNMA1-216ENST00000457953 KANK1Q14678 1352 aa17.28■□□□□ 0.36
KCNMA1-216ENST00000457953 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
KCNMA1-216ENST00000457953 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
KCNMA1-216ENST00000457953 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
KCNMA1-216ENST00000457953 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
KCNMA1-216ENST00000457953 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.35
KCNMA1-216ENST00000457953 CLUAP1Q96AJ1 413 aa17.27■□□□□ 0.35
KCNMA1-216ENST00000457953 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
KCNMA1-216ENST00000457953 PDE4AP27815 886 aa17.26■□□□□ 0.35
KCNMA1-216ENST00000457953 WASHC2CQ9Y4E1 1318 aa17.26■□□□□ 0.35
KCNMA1-216ENST00000457953 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
KCNMA1-216ENST00000457953 CNTLNQ9NXG0 1405 aa17.26■□□□□ 0.35
KCNMA1-216ENST00000457953 USP47Q96K76 1375 aa17.25■□□□□ 0.35
KCNMA1-216ENST00000457953 PANK3Q9H999 370 aa17.25■□□□□ 0.35
KCNMA1-216ENST00000457953 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 APBB1O00213 710 aa17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 ABCC5O15440 1437 aa17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 ANKRD30BQ9BXX2 1392 aa17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
KCNMA1-216ENST00000457953 NUP153P49790 1475 aaKnown RBP17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 POLR1AO95602 1720 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
KCNMA1-216ENST00000457953 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
KCNMA1-216ENST00000457953 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
KCNMA1-216ENST00000457953 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
KCNMA1-216ENST00000457953 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
KCNMA1-216ENST00000457953 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
KCNMA1-216ENST00000457953 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.34
KCNMA1-216ENST00000457953 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.34
KCNMA1-216ENST00000457953 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
KCNMA1-216ENST00000457953 ANKRD50Q9ULJ7 1429 aa17.2■□□□□ 0.34
KCNMA1-216ENST00000457953 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
KCNMA1-216ENST00000457953 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
KCNMA1-216ENST00000457953 GSE1Q14687 1217 aa17.19■□□□□ 0.34
KCNMA1-216ENST00000457953 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
KCNMA1-216ENST00000457953 RSPH4AQ5TD94 716 aa17.18■□□□□ 0.34
KCNMA1-216ENST00000457953 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
KCNMA1-216ENST00000457953 MFAP1P55081 439 aaKnown RBP17.18■□□□□ 0.34
KCNMA1-216ENST00000457953 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
KCNMA1-216ENST00000457953 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
KCNMA1-216ENST00000457953 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
KCNMA1-216ENST00000457953 PLB1Q6P1J6 1458 aa17.16■□□□□ 0.34
KCNMA1-216ENST00000457953 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 A0A0G2JS52 829 aa17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
KCNMA1-216ENST00000457953 GOLGA6L3A6NEY3 463 aa17.14■□□□□ 0.33
KCNMA1-216ENST00000457953 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
KCNMA1-216ENST00000457953 SPATA31E1Q6ZUB1 1445 aa17.14■□□□□ 0.33
KCNMA1-216ENST00000457953 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
KCNMA1-216ENST00000457953 TMEM132EQ6IEE7 984 aa17.13■□□□□ 0.33
KCNMA1-216ENST00000457953 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
KCNMA1-216ENST00000457953 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
KCNMA1-216ENST00000457953 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
KCNMA1-216ENST00000457953 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms