RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 PLIN1O60240 522 aa18.42■□□□□ 0.54
TOP3B-214ENST00000457270 HSP90AA2PQ14568 343 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-214ENST00000457270 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
TOP3B-214ENST00000457270 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
TOP3B-214ENST00000457270 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
TOP3B-214ENST00000457270 SLC24A1O60721 1099 aa18.39■□□□□ 0.54
TOP3B-214ENST00000457270 CDK13Q14004 1512 aaKnown RBP18.38■□□□□ 0.53
TOP3B-214ENST00000457270 WDR62O43379 1518 aa18.37■□□□□ 0.53
TOP3B-214ENST00000457270 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
TOP3B-214ENST00000457270 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
TOP3B-214ENST00000457270 NAP1L5Q96NT1 182 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-214ENST00000457270 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
TOP3B-214ENST00000457270 RRAGDQ9NQL2 400 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-214ENST00000457270 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
TOP3B-214ENST00000457270 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
TOP3B-214ENST00000457270 L1TD1Q5T7N2 865 aaKnown RBP18.34■□□□□ 0.53
TOP3B-214ENST00000457270 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
TOP3B-214ENST00000457270 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.53
TOP3B-214ENST00000457270 ST20-MTHFSA0A0A6YYL1 179 aa18.33■□□□□ 0.52
TOP3B-214ENST00000457270 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
TOP3B-214ENST00000457270 ADGRL2O95490 1459 aa18.31■□□□□ 0.52
TOP3B-214ENST00000457270 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-214ENST00000457270 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
TOP3B-214ENST00000457270 POGKQ9P215 609 aa18.29■□□□□ 0.52
TOP3B-214ENST00000457270 PKD2Q13563 968 aa18.28■□□□□ 0.52
TOP3B-214ENST00000457270 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.51
TOP3B-214ENST00000457270 KIAA0586Q9BVV6 1533 aa18.26■□□□□ 0.51
TOP3B-214ENST00000457270 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
TOP3B-214ENST00000457270 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
TOP3B-214ENST00000457270 CROCC2H7BZ55 1655 aa18.25■□□□□ 0.51
TOP3B-214ENST00000457270 USP19O94966 1318 aa18.24■□□□□ 0.51
TOP3B-214ENST00000457270 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-214ENST00000457270 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
TOP3B-214ENST00000457270 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
TOP3B-214ENST00000457270 CAMSAP2Q08AD1 1489 aa18.23■□□□□ 0.51
TOP3B-214ENST00000457270 BECN1Q14457 450 aa18.22■□□□□ 0.51
TOP3B-214ENST00000457270 CLCN1P35523 988 aa18.21■□□□□ 0.51
TOP3B-214ENST00000457270 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
TOP3B-214ENST00000457270 EIF3AQ14152 1382 aaKnown RBP18.21■□□□□ 0.51
TOP3B-214ENST00000457270 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
TOP3B-214ENST00000457270 RGS3P49796 1198 aa18.2■□□□□ 0.5
TOP3B-214ENST00000457270 ITSN2Q9NZM3 1697 aa18.2■□□□□ 0.5
TOP3B-214ENST00000457270 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
TOP3B-214ENST00000457270 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
TOP3B-214ENST00000457270 COL17A1Q9UMD9 1497 aaPredicted RBP18.19■□□□□ 0.5
TOP3B-214ENST00000457270 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
TOP3B-214ENST00000457270 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
TOP3B-214ENST00000457270 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
TOP3B-214ENST00000457270 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
TOP3B-214ENST00000457270 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
TOP3B-214ENST00000457270 FSD2A1L4K1 749 aa18.18■□□□□ 0.5
TOP3B-214ENST00000457270 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
TOP3B-214ENST00000457270 LAMC1P11047 1609 aa18.17■□□□□ 0.5
TOP3B-214ENST00000457270 NLRP1Q9C000 1473 aa18.16■□□□□ 0.5
TOP3B-214ENST00000457270 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
TOP3B-214ENST00000457270 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■□□ 15.7
TOP3B-214ENST00000457270 GOLGA6L3A6NEY3 463 aa18.14■□□□□ 0.49
TOP3B-214ENST00000457270 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
TOP3B-214ENST00000457270 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
TOP3B-214ENST00000457270 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 PRAG1Q86YV5 1406 aa18.13■□□□□ 0.49
TOP3B-214ENST00000457270 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
TOP3B-214ENST00000457270 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
TOP3B-214ENST00000457270 NUP155O75694 1391 aa18.11■□□□□ 0.49
TOP3B-214ENST00000457270 ARXQ96QS3 562 aa18.11■□□□□ 0.49
TOP3B-214ENST00000457270 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
TOP3B-214ENST00000457270 PTPRGP23470 1445 aa18.1■□□□□ 0.49
TOP3B-214ENST00000457270 PRDM15P57071 1507 aaPredicted RBP18.1■□□□□ 0.49
TOP3B-214ENST00000457270 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
TOP3B-214ENST00000457270 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
TOP3B-214ENST00000457270 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
TOP3B-214ENST00000457270 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
TOP3B-214ENST00000457270 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
TOP3B-214ENST00000457270 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
TOP3B-214ENST00000457270 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-214ENST00000457270 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
TOP3B-214ENST00000457270 SHANK2Q9UPX8 1470 aa18.09■□□□□ 0.49
TOP3B-214ENST00000457270 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
TOP3B-214ENST00000457270 SEC24BO95487 1268 aa18.09■□□□□ 0.49
TOP3B-214ENST00000457270 PANK3Q9H999 370 aa18.08■□□□□ 0.49
TOP3B-214ENST00000457270 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.48
TOP3B-214ENST00000457270 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
TOP3B-214ENST00000457270 TESK2Q96S53 571 aa18.07■□□□□ 0.48
TOP3B-214ENST00000457270 IGHDP01880 384 aa18.06■□□□□ 0.48
TOP3B-214ENST00000457270 NKTRP30414 1462 aaKnown RBP18.06■□□□□ 0.48
TOP3B-214ENST00000457270 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
TOP3B-214ENST00000457270 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 KIAA0556O60303 1618 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
TOP3B-214ENST00000457270 MCM4P33991 863 aa18.04■□□□□ 0.48
TOP3B-214ENST00000457270 MRE11P49959 708 aa18.04■□□□□ 0.48
TOP3B-214ENST00000457270 WDR43Q15061 677 aaKnown RBP eCLIP18.04■□□□□ 0.48
TOP3B-214ENST00000457270 AAMPQ13685 434 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms