RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
COMMD3-204ENST00000456711 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
COMMD3-204ENST00000456711 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
COMMD3-204ENST00000456711 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
COMMD3-204ENST00000456711 KCNK17Q96T54 332 aa12.53□□□□□ -0.4
COMMD3-204ENST00000456711 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.4
COMMD3-204ENST00000456711 A0A0G2JS52 829 aa12.52□□□□□ -0.41
COMMD3-204ENST00000456711 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
COMMD3-204ENST00000456711 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
COMMD3-204ENST00000456711 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
COMMD3-204ENST00000456711 LMTK3Q96Q04 1460 aa12.48□□□□□ -0.41
COMMD3-204ENST00000456711 STK25O00506 426 aa12.48□□□□□ -0.41
COMMD3-204ENST00000456711 PPP1R37O75864 691 aa12.48□□□□□ -0.41
COMMD3-204ENST00000456711 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
COMMD3-204ENST00000456711 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
COMMD3-204ENST00000456711 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
COMMD3-204ENST00000456711 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
COMMD3-204ENST00000456711 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
COMMD3-204ENST00000456711 SOCS7O14512 581 aa12.41□□□□□ -0.42
COMMD3-204ENST00000456711 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
COMMD3-204ENST00000456711 KDM6BO15054 1643 aa12.4□□□□□ -0.42
COMMD3-204ENST00000456711 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
COMMD3-204ENST00000456711 BHMG1C9JSJ3 638 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-204ENST00000456711 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-204ENST00000456711 FOXK1P85037 733 aa12.38□□□□□ -0.43
COMMD3-204ENST00000456711 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
COMMD3-204ENST00000456711 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-204ENST00000456711 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
COMMD3-204ENST00000456711 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
COMMD3-204ENST00000456711 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
COMMD3-204ENST00000456711 Q6ZNB5 142 aa12.35□□□□□ -0.43
COMMD3-204ENST00000456711 WNT2BQ93097 391 aa12.35□□□□□ -0.43
COMMD3-204ENST00000456711 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
COMMD3-204ENST00000456711 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
COMMD3-204ENST00000456711 DSG2Q14126 1118 aa12.34□□□□□ -0.43
COMMD3-204ENST00000456711 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
COMMD3-204ENST00000456711 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
COMMD3-204ENST00000456711 SLC4A5Q9BY07 1137 aa12.33□□□□□ -0.44
COMMD3-204ENST00000456711 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
COMMD3-204ENST00000456711 TBC1D12O60347 775 aa12.31□□□□□ -0.44
COMMD3-204ENST00000456711 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
COMMD3-204ENST00000456711 SOGA1O94964 1423 aa12.3□□□□□ -0.44
COMMD3-204ENST00000456711 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
COMMD3-204ENST00000456711 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
COMMD3-204ENST00000456711 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
COMMD3-204ENST00000456711 GRIN2BQ13224 1484 aa12.29□□□□□ -0.44
COMMD3-204ENST00000456711 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
COMMD3-204ENST00000456711 GOLGA8CPA6NN73 597 aa12.28□□□□□ -0.44
COMMD3-204ENST00000456711 DIP2BQ9P265 1576 aa12.27□□□□□ -0.44
COMMD3-204ENST00000456711 LCE2BO14633 110 aa12.27□□□□□ -0.45
COMMD3-204ENST00000456711 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
COMMD3-204ENST00000456711 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
COMMD3-204ENST00000456711 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
COMMD3-204ENST00000456711 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
COMMD3-204ENST00000456711 OXER1Q8TDS5 423 aa12.23□□□□□ -0.45
COMMD3-204ENST00000456711 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
COMMD3-204ENST00000456711 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
COMMD3-204ENST00000456711 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.45
COMMD3-204ENST00000456711 RGL2O15211 777 aa12.21□□□□□ -0.45
COMMD3-204ENST00000456711 PTPREP23469 700 aa12.21□□□□□ -0.45
COMMD3-204ENST00000456711 FOSBP53539 338 aa12.21□□□□□ -0.45
COMMD3-204ENST00000456711 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
COMMD3-204ENST00000456711 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
COMMD3-204ENST00000456711 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
COMMD3-204ENST00000456711 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
COMMD3-204ENST00000456711 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
COMMD3-204ENST00000456711 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
COMMD3-204ENST00000456711 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
COMMD3-204ENST00000456711 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
COMMD3-204ENST00000456711 NUP160Q12769 1436 aa12.13□□□□□ -0.47
COMMD3-204ENST00000456711 BCAMP50895 628 aa12.12□□□□□ -0.47
COMMD3-204ENST00000456711 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
COMMD3-204ENST00000456711 PROX2Q3B8N5 592 aa12.08□□□□□ -0.48
COMMD3-204ENST00000456711 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
COMMD3-204ENST00000456711 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
COMMD3-204ENST00000456711 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
COMMD3-204ENST00000456711 PKD2Q13563 968 aa12.07□□□□□ -0.48
COMMD3-204ENST00000456711 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
COMMD3-204ENST00000456711 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
COMMD3-204ENST00000456711 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
COMMD3-204ENST00000456711 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
COMMD3-204ENST00000456711 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
COMMD3-204ENST00000456711 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
COMMD3-204ENST00000456711 GFRA3O60609 400 aa12.04□□□□□ -0.48
COMMD3-204ENST00000456711 COL17A1Q9UMD9 1497 aaPredicted RBP12.03□□□□□ -0.48
COMMD3-204ENST00000456711 KCNC4Q03721 635 aa12.03□□□□□ -0.48
COMMD3-204ENST00000456711 LAPTM4AQ15012 233 aa12.03□□□□□ -0.48
COMMD3-204ENST00000456711 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
COMMD3-204ENST00000456711 RABGEF1Q9UJ41 708 aa12.03□□□□□ -0.48
COMMD3-204ENST00000456711 SPATA31D1Q6ZQQ2 1576 aa12.03□□□□□ -0.48
COMMD3-204ENST00000456711 ADAMTS12P58397 1594 aa12.02□□□□□ -0.49
COMMD3-204ENST00000456711 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
COMMD3-204ENST00000456711 EVI5O60447 810 aa12.02□□□□□ -0.49
COMMD3-204ENST00000456711 CUX1P39880 1505 aa12.01□□□□□ -0.49
COMMD3-204ENST00000456711 COL9A1P20849 921 aa12.01□□□□□ -0.49
COMMD3-204ENST00000456711 PPP1R15BQ5SWA1 713 aa12.01□□□□□ -0.49
COMMD3-204ENST00000456711 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
COMMD3-204ENST00000456711 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
COMMD3-204ENST00000456711 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
COMMD3-204ENST00000456711 GLI2P10070 1586 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms