RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 ITGAEP38570 1179 aa22.86■■□□□ 1.25
PLOD3-207ENST00000456079 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
PLOD3-207ENST00000456079 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
PLOD3-207ENST00000456079 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
PLOD3-207ENST00000456079 RNF17Q9BXT8 1623 aaKnown RBP22.83■■□□□ 1.25
PLOD3-207ENST00000456079 ESF1Q9H501 851 aaKnown RBP22.83■■□□□ 1.25
PLOD3-207ENST00000456079 PPP6R1Q9UPN7 881 aa22.82■■□□□ 1.24
PLOD3-207ENST00000456079 EIF2AK4Q9P2K8 1649 aaKnown RBP22.82■■□□□ 1.24
PLOD3-207ENST00000456079 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
PLOD3-207ENST00000456079 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
PLOD3-207ENST00000456079 WASHC2CQ9Y4E1 1318 aa22.79■■□□□ 1.24
PLOD3-207ENST00000456079 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
PLOD3-207ENST00000456079 HSPA2P54652 639 aa22.78■■□□□ 1.24
PLOD3-207ENST00000456079 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
PLOD3-207ENST00000456079 ABCC3O15438 1527 aa22.77■■□□□ 1.24
PLOD3-207ENST00000456079 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
PLOD3-207ENST00000456079 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
PLOD3-207ENST00000456079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
PLOD3-207ENST00000456079 DEPDC5O75140 1603 aa22.74■■□□□ 1.23
PLOD3-207ENST00000456079 PRDM15P57071 1507 aaPredicted RBP22.73■■□□□ 1.23
PLOD3-207ENST00000456079 NPATQ14207 1427 aa22.72■■□□□ 1.23
PLOD3-207ENST00000456079 FAM135AQ9P2D6 1515 aa22.71■■□□□ 1.23
PLOD3-207ENST00000456079 PZPP20742 1482 aa22.7■■□□□ 1.22
PLOD3-207ENST00000456079 VWDEQ8N2E2 1590 aa22.7■■□□□ 1.22
PLOD3-207ENST00000456079 PREX1Q8TCU6 1659 aa22.7■■□□□ 1.22
PLOD3-207ENST00000456079 CEP152O94986 1710 aa22.7■■□□□ 1.22
PLOD3-207ENST00000456079 SETD1BQ9UPS6 1966 aaKnown RBP22.67■■□□□ 1.22
PLOD3-207ENST00000456079 UHRF1BP1Q6BDS2 1440 aa22.66■■□□□ 1.22
PLOD3-207ENST00000456079 ZC3H13Q5T200 1668 aaKnown RBP22.65■■□□□ 1.22
PLOD3-207ENST00000456079 NAIPQ13075 1403 aa22.64■■□□□ 1.21
PLOD3-207ENST00000456079 CAMSAP1Q5T5Y3 1602 aa22.64■■□□□ 1.21
PLOD3-207ENST00000456079 LMTK2Q8IWU2 1503 aa22.63■■□□□ 1.21
PLOD3-207ENST00000456079 TNRQ92752 1358 aa22.62■■□□□ 1.21
PLOD3-207ENST00000456079 MYO3AQ8NEV4 1616 aa22.61■■□□□ 1.21
PLOD3-207ENST00000456079 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
PLOD3-207ENST00000456079 ARHGAP31Q2M1Z3 1444 aa22.6■■□□□ 1.21
PLOD3-207ENST00000456079 UNC13BO14795 1591 aa22.59■■□□□ 1.21
PLOD3-207ENST00000456079 KANK1Q14678 1352 aa22.59■■□□□ 1.21
PLOD3-207ENST00000456079 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
PLOD3-207ENST00000456079 CEP170BQ9Y4F5 1589 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-207ENST00000456079 HFM1A2PYH4 1435 aa22.56■■□□□ 1.2
PLOD3-207ENST00000456079 EFCAB6Q5THR3 1501 aa22.55■■□□□ 1.2
PLOD3-207ENST00000456079 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
PLOD3-207ENST00000456079 CFAP65Q6ZU64 1925 aaKnown RBP22.55■■□□□ 1.2
PLOD3-207ENST00000456079 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
PLOD3-207ENST00000456079 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
PLOD3-207ENST00000456079 NUP155O75694 1391 aa22.52■■□□□ 1.2
PLOD3-207ENST00000456079 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
PLOD3-207ENST00000456079 SYNMO15061 1565 aa22.5■■□□□ 1.19
PLOD3-207ENST00000456079 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
PLOD3-207ENST00000456079 NOS1P29475 1434 aa22.49■■□□□ 1.19
PLOD3-207ENST00000456079 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
PLOD3-207ENST00000456079 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
PLOD3-207ENST00000456079 TET3O43151 1660 aa22.48■■□□□ 1.19
PLOD3-207ENST00000456079 IDI1Q13907 227 aa22.45■■□□□ 1.18
PLOD3-207ENST00000456079 E9PCH4 1651 aa22.45■■□□□ 1.18
PLOD3-207ENST00000456079 UGGT1Q9NYU2 1555 aa22.43■■□□□ 1.18
PLOD3-207ENST00000456079 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
PLOD3-207ENST00000456079 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
PLOD3-207ENST00000456079 PIK3C2BO00750 1634 aa22.4■■□□□ 1.18
PLOD3-207ENST00000456079 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
PLOD3-207ENST00000456079 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
PLOD3-207ENST00000456079 TRIM52Q96A61 297 aa22.37■■□□□ 1.17
PLOD3-207ENST00000456079 NEURL4Q96JN8 1562 aa22.37■■□□□ 1.17
PLOD3-207ENST00000456079 PTPRTO14522 1441 aa22.36■■□□□ 1.17
PLOD3-207ENST00000456079 SETD5Q9C0A6 1442 aa22.36■■□□□ 1.17
PLOD3-207ENST00000456079 LTKP29376 864 aa22.34■■□□□ 1.17
PLOD3-207ENST00000456079 PKD2Q13563 968 aa22.34■■□□□ 1.17
PLOD3-207ENST00000456079 ARHGAP23Q9P227 1491 aa22.33■■□□□ 1.16
PLOD3-207ENST00000456079 FOXD1Q16676 465 aa22.32■■□□□ 1.16
PLOD3-207ENST00000456079 SLC52A1Q9NWF4 448 aa22.32■■□□□ 1.16
PLOD3-207ENST00000456079 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
PLOD3-207ENST00000456079 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
PLOD3-207ENST00000456079 ANKLE2Q86XL3 938 aa22.3■■□□□ 1.16
PLOD3-207ENST00000456079 SLIT1O75093 1534 aa22.3■■□□□ 1.16
PLOD3-207ENST00000456079 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
PLOD3-207ENST00000456079 ADGRB3O60242 1522 aa22.29■■□□□ 1.16
PLOD3-207ENST00000456079 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
PLOD3-207ENST00000456079 TMEM131LA2VDJ0 1609 aa22.27■■□□□ 1.16
PLOD3-207ENST00000456079 MED14O60244 1454 aa22.27■■□□□ 1.16
PLOD3-207ENST00000456079 POLR1AO95602 1720 aaPredicted RBP22.26■■□□□ 1.15
PLOD3-207ENST00000456079 MPHOSPH9Q99550 1183 aa22.26■■□□□ 1.15
PLOD3-207ENST00000456079 STAG3Q9UJ98 1225 aa22.25■■□□□ 1.15
PLOD3-207ENST00000456079 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
PLOD3-207ENST00000456079 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
PLOD3-207ENST00000456079 KDM5AP29375 1690 aaKnown RBP22.24■■□□□ 1.15
PLOD3-207ENST00000456079 SPHKAPQ2M3C7 1700 aa22.24■■□□□ 1.15
PLOD3-207ENST00000456079 TXNDC2Q86VQ3 553 aa22.24■■□□□ 1.15
PLOD3-207ENST00000456079 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
PLOD3-207ENST00000456079 SCAF11Q99590 1463 aaKnown RBP22.23■■□□□ 1.15
PLOD3-207ENST00000456079 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
PLOD3-207ENST00000456079 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
PLOD3-207ENST00000456079 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
PLOD3-207ENST00000456079 TRPM2O94759 1503 aa22.21■■□□□ 1.15
PLOD3-207ENST00000456079 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
PLOD3-207ENST00000456079 NUTM2DQ5VT03 806 aaPredicted RBP22.19■■□□□ 1.14
PLOD3-207ENST00000456079 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
PLOD3-207ENST00000456079 IQGAP1P46940 1657 aa22.17■■□□□ 1.14
PLOD3-207ENST00000456079 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
PLOD3-207ENST00000456079 CERKQ8TCT0 537 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms