RNA–Protein interactions for RNA: ENST00000455959.7

SEC11A-202, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SEC11A, Length 1,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-202ENST00000455959 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
SEC11A-202ENST00000455959 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
SEC11A-202ENST00000455959 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.29
SEC11A-202ENST00000455959 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
SEC11A-202ENST00000455959 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
SEC11A-202ENST00000455959 BCORL1Q5H9F3 1711 aa13.19□□□□□ -0.3
SEC11A-202ENST00000455959 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
SEC11A-202ENST00000455959 PTPRTO14522 1441 aa13.19□□□□□ -0.3
SEC11A-202ENST00000455959 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
SEC11A-202ENST00000455959 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
SEC11A-202ENST00000455959 CUL7Q14999 1698 aa13.17□□□□□ -0.3
SEC11A-202ENST00000455959 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
SEC11A-202ENST00000455959 SOX12O15370 315 aa13.15□□□□□ -0.3
SEC11A-202ENST00000455959 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
SEC11A-202ENST00000455959 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
SEC11A-202ENST00000455959 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
SEC11A-202ENST00000455959 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
SEC11A-202ENST00000455959 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
SEC11A-202ENST00000455959 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
SEC11A-202ENST00000455959 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
SEC11A-202ENST00000455959 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
SEC11A-202ENST00000455959 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
SEC11A-202ENST00000455959 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
SEC11A-202ENST00000455959 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
SEC11A-202ENST00000455959 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
SEC11A-202ENST00000455959 HSPA1LP34931 641 aa13.07□□□□□ -0.32
SEC11A-202ENST00000455959 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
SEC11A-202ENST00000455959 G3V3G9 751 aa13.06□□□□□ -0.32
SEC11A-202ENST00000455959 NLRP6P59044 892 aa13.06□□□□□ -0.32
SEC11A-202ENST00000455959 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
SEC11A-202ENST00000455959 ZCCHC11Q5TAX3 1644 aaKnown RBP13.05□□□□□ -0.32
SEC11A-202ENST00000455959 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
SEC11A-202ENST00000455959 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.33
SEC11A-202ENST00000455959 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
SEC11A-202ENST00000455959 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
SEC11A-202ENST00000455959 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
SEC11A-202ENST00000455959 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
SEC11A-202ENST00000455959 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
SEC11A-202ENST00000455959 FANCAO15360 1455 aa13□□□□□ -0.33
SEC11A-202ENST00000455959 SLAIN1Q8ND83 568 aa13□□□□□ -0.33
SEC11A-202ENST00000455959 TOM1O60784 492 aa12.99□□□□□ -0.33
SEC11A-202ENST00000455959 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
SEC11A-202ENST00000455959 PREX1Q8TCU6 1659 aa12.98□□□□□ -0.33
SEC11A-202ENST00000455959 NEO1Q92859 1461 aa12.97□□□□□ -0.33
SEC11A-202ENST00000455959 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
SEC11A-202ENST00000455959 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
SEC11A-202ENST00000455959 MLECQ14165 292 aa12.94□□□□□ -0.34
SEC11A-202ENST00000455959 IGF1RP08069 1367 aa12.94□□□□□ -0.34
SEC11A-202ENST00000455959 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
SEC11A-202ENST00000455959 CEBPAP49715 358 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-202ENST00000455959 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
SEC11A-202ENST00000455959 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
SEC11A-202ENST00000455959 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
SEC11A-202ENST00000455959 RGS17Q9UGC6 210 aaPredicted RBP12.92□□□□□ -0.34
SEC11A-202ENST00000455959 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
SEC11A-202ENST00000455959 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
SEC11A-202ENST00000455959 ARHGEF40Q8TER5 1519 aa12.9□□□□□ -0.34
SEC11A-202ENST00000455959 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
SEC11A-202ENST00000455959 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
SEC11A-202ENST00000455959 DENND4BO75064 1496 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-202ENST00000455959 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-202ENST00000455959 IQGAP2Q13576 1575 aa12.86□□□□□ -0.35
SEC11A-202ENST00000455959 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
SEC11A-202ENST00000455959 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
SEC11A-202ENST00000455959 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
SEC11A-202ENST00000455959 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
SEC11A-202ENST00000455959 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.35
SEC11A-202ENST00000455959 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
SEC11A-202ENST00000455959 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
SEC11A-202ENST00000455959 CARMIL1Q5VZK9 1371 aa12.82□□□□□ -0.36
SEC11A-202ENST00000455959 PPP1R37O75864 691 aa12.82□□□□□ -0.36
SEC11A-202ENST00000455959 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
SEC11A-202ENST00000455959 SNPHO15079 494 aa12.81□□□□□ -0.36
SEC11A-202ENST00000455959 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
SEC11A-202ENST00000455959 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
SEC11A-202ENST00000455959 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
SEC11A-202ENST00000455959 POTEAQ6S8J7 498 aa12.8□□□□□ -0.36
SEC11A-202ENST00000455959 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
SEC11A-202ENST00000455959 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
SEC11A-202ENST00000455959 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
SEC11A-202ENST00000455959 ZFYVE16Q7Z3T8 1539 aa12.78□□□□□ -0.36
SEC11A-202ENST00000455959 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.374e-7■■■■□ 26.3
SEC11A-202ENST00000455959 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
SEC11A-202ENST00000455959 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
SEC11A-202ENST00000455959 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
SEC11A-202ENST00000455959 ATP10AO60312 1499 aa12.74□□□□□ -0.37
SEC11A-202ENST00000455959 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
SEC11A-202ENST00000455959 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
SEC11A-202ENST00000455959 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
SEC11A-202ENST00000455959 ABCA8O94911 1581 aa12.73□□□□□ -0.37
SEC11A-202ENST00000455959 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
SEC11A-202ENST00000455959 RICTORQ6R327 1708 aa12.71□□□□□ -0.38
SEC11A-202ENST00000455959 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.38
SEC11A-202ENST00000455959 CAMSAP1Q5T5Y3 1602 aa12.7□□□□□ -0.38
SEC11A-202ENST00000455959 ST18O60284 1047 aa12.7□□□□□ -0.38
SEC11A-202ENST00000455959 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
SEC11A-202ENST00000455959 CPS1P31327 1500 aa12.7□□□□□ -0.38
SEC11A-202ENST00000455959 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
SEC11A-202ENST00000455959 ATP10BO94823 1461 aa12.69□□□□□ -0.38
SEC11A-202ENST00000455959 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms