RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 FAM135AQ9P2D6 1515 aa9.85□□□□□ -0.83
ECHDC1-210ENST00000454859 KIDINS220Q9ULH0 1771 aa9.85□□□□□ -0.83
ECHDC1-210ENST00000454859 RNF17Q9BXT8 1623 aaKnown RBP9.85□□□□□ -0.83
ECHDC1-210ENST00000454859 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
ECHDC1-210ENST00000454859 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
ECHDC1-210ENST00000454859 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
ECHDC1-210ENST00000454859 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
ECHDC1-210ENST00000454859 RICTORQ6R327 1708 aa9.84□□□□□ -0.83
ECHDC1-210ENST00000454859 TET3O43151 1660 aa9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 NUP155O75694 1391 aa9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 DHX29Q7Z478 1369 aaKnown RBP9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 LMTK2Q8IWU2 1503 aa9.83□□□□□ -0.84
ECHDC1-210ENST00000454859 REREQ9P2R6 1566 aa9.82□□□□□ -0.84
ECHDC1-210ENST00000454859 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
ECHDC1-210ENST00000454859 KANK1Q14678 1352 aa9.81□□□□□ -0.84
ECHDC1-210ENST00000454859 CYB5RLQ6IPT4 315 aa9.81□□□□□ -0.84
ECHDC1-210ENST00000454859 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
ECHDC1-210ENST00000454859 A2MP01023 1474 aa9.79□□□□□ -0.84
ECHDC1-210ENST00000454859 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
ECHDC1-210ENST00000454859 PPRC1Q5VV67 1664 aaKnown RBP9.79□□□□□ -0.84
ECHDC1-210ENST00000454859 UHRF1BP1Q6BDS2 1440 aa9.78□□□□□ -0.84
ECHDC1-210ENST00000454859 PKD2Q13563 968 aa9.78□□□□□ -0.84
ECHDC1-210ENST00000454859 SIN3AQ96ST3 1273 aa9.77□□□□□ -0.85
ECHDC1-210ENST00000454859 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.85
ECHDC1-210ENST00000454859 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
ECHDC1-210ENST00000454859 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 TRPM2O94759 1503 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 PTPRTO14522 1441 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 ABCA6Q8N139 1617 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 AGLP35573 1532 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 E9PCH4 1651 aa9.76□□□□□ -0.85
ECHDC1-210ENST00000454859 DIP2CQ9Y2E4 1556 aa9.75□□□□□ -0.85
ECHDC1-210ENST00000454859 CEP152O94986 1710 aa9.75□□□□□ -0.85
ECHDC1-210ENST00000454859 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
ECHDC1-210ENST00000454859 FRMPD1Q5SYB0 1578 aa9.74□□□□□ -0.85
ECHDC1-210ENST00000454859 EFCAB6Q5THR3 1501 aa9.74□□□□□ -0.85
ECHDC1-210ENST00000454859 LAMC1P11047 1609 aa9.74□□□□□ -0.85
ECHDC1-210ENST00000454859 POLR1AO95602 1720 aaPredicted RBP9.74□□□□□ -0.85
ECHDC1-210ENST00000454859 ARHGAP31Q2M1Z3 1444 aa9.72□□□□□ -0.85
ECHDC1-210ENST00000454859 FAM69CQ0P6D2 419 aa9.72□□□□□ -0.85
ECHDC1-210ENST00000454859 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.85
ECHDC1-210ENST00000454859 PIAS4Q8N2W9 510 aaPredicted RBP9.71□□□□□ -0.85
ECHDC1-210ENST00000454859 L3MBTL2Q969R5 705 aa9.71□□□□□ -0.86
ECHDC1-210ENST00000454859 PLA2R1Q13018 1463 aa9.7□□□□□ -0.86
ECHDC1-210ENST00000454859 RALGAPBQ86X10 1494 aa9.7□□□□□ -0.86
ECHDC1-210ENST00000454859 KIF1BO60333 1816 aa9.7□□□□□ -0.86
ECHDC1-210ENST00000454859 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
ECHDC1-210ENST00000454859 ARHGEF40Q8TER5 1519 aa9.69□□□□□ -0.86
ECHDC1-210ENST00000454859 CNTLNQ9NXG0 1405 aa9.69□□□□□ -0.86
ECHDC1-210ENST00000454859 ARID4BQ4LE39 1312 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-210ENST00000454859 TSPOAP1O95153 1857 aa9.69□□□□□ -0.86
ECHDC1-210ENST00000454859 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
ECHDC1-210ENST00000454859 ABCC3O15438 1527 aa9.68□□□□□ -0.86
ECHDC1-210ENST00000454859 KIF3BO15066 747 aa9.68□□□□□ -0.86
ECHDC1-210ENST00000454859 SPATA31E1Q6ZUB1 1445 aa9.67□□□□□ -0.86
ECHDC1-210ENST00000454859 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
ECHDC1-210ENST00000454859 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
ECHDC1-210ENST00000454859 TRPM1Q7Z4N2 1603 aa9.66□□□□□ -0.86
ECHDC1-210ENST00000454859 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
ECHDC1-210ENST00000454859 MYOM2P54296 1465 aa9.65□□□□□ -0.86
ECHDC1-210ENST00000454859 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
ECHDC1-210ENST00000454859 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
ECHDC1-210ENST00000454859 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
ECHDC1-210ENST00000454859 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
ECHDC1-210ENST00000454859 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
ECHDC1-210ENST00000454859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.64□□□□□ -0.872e-7■■■□□ 17
ECHDC1-210ENST00000454859 NOS1P29475 1434 aa9.64□□□□□ -0.87
ECHDC1-210ENST00000454859 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
ECHDC1-210ENST00000454859 RAPGEF3O95398 923 aa9.62□□□□□ -0.87
ECHDC1-210ENST00000454859 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
ECHDC1-210ENST00000454859 MROH2AA6NES4 1674 aa9.62□□□□□ -0.87
ECHDC1-210ENST00000454859 KDM5AP29375 1690 aaKnown RBP9.62□□□□□ -0.87
ECHDC1-210ENST00000454859 MADDQ8WXG6 1647 aa9.62□□□□□ -0.87
ECHDC1-210ENST00000454859 NPATQ14207 1427 aa9.61□□□□□ -0.87
ECHDC1-210ENST00000454859 YEATS2Q9ULM3 1422 aa9.61□□□□□ -0.87
ECHDC1-210ENST00000454859 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 PREX1Q8TCU6 1659 aa9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 WASHC2CQ9Y4E1 1318 aa9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 PPLO60437 1756 aa9.6□□□□□ -0.87
ECHDC1-210ENST00000454859 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
ECHDC1-210ENST00000454859 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
ECHDC1-210ENST00000454859 NBPF8Q3BBV2 869 aa9.59□□□□□ -0.87
ECHDC1-210ENST00000454859 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
ECHDC1-210ENST00000454859 IQGAP1P46940 1657 aa9.58□□□□□ -0.88
ECHDC1-210ENST00000454859 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
ECHDC1-210ENST00000454859 USP47Q96K76 1375 aa9.58□□□□□ -0.88
ECHDC1-210ENST00000454859 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
ECHDC1-210ENST00000454859 SYNMO15061 1565 aa9.57□□□□□ -0.88
ECHDC1-210ENST00000454859 SIGLEC1Q9BZZ2 1709 aa9.57□□□□□ -0.88
ECHDC1-210ENST00000454859 COL17A1Q9UMD9 1497 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-210ENST00000454859 GGT6Q6P531 493 aa9.55□□□□□ -0.88
ECHDC1-210ENST00000454859 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-210ENST00000454859 EIF3AQ14152 1382 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 CCDC7Q96M83 1385 aa9.54□□□□□ -0.88
ECHDC1-210ENST00000454859 ERVK-7P63135 1459 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms