RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
TCF3-204ENST00000453954 CENPQQ7L2Z9 268 aaPredicted RBP22.34■■□□□ 1.17
TCF3-204ENST00000453954 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
TCF3-204ENST00000453954 ABCC5O15440 1437 aa22.33■■□□□ 1.17
TCF3-204ENST00000453954 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
TCF3-204ENST00000453954 UPF2Q9HAU5 1272 aaKnown RBP22.32■■□□□ 1.16
TCF3-204ENST00000453954 PANK1Q8TE04 598 aa22.32■■□□□ 1.16
TCF3-204ENST00000453954 TMF1P82094 1093 aa22.32■■□□□ 1.16
TCF3-204ENST00000453954 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
TCF3-204ENST00000453954 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
TCF3-204ENST00000453954 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
TCF3-204ENST00000453954 BECN1Q14457 450 aa22.29■■□□□ 1.16
TCF3-204ENST00000453954 EPRSP07814 1512 aaKnown RBP22.29■■□□□ 1.16
TCF3-204ENST00000453954 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
TCF3-204ENST00000453954 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
TCF3-204ENST00000453954 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
TCF3-204ENST00000453954 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.15
TCF3-204ENST00000453954 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
TCF3-204ENST00000453954 KIAA1107Q9UPP5 1409 aa22.25■■□□□ 1.15
TCF3-204ENST00000453954 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
TCF3-204ENST00000453954 MIA2Q96PC5 1412 aa22.25■■□□□ 1.15
TCF3-204ENST00000453954 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
TCF3-204ENST00000453954 SEC24BO95487 1268 aa22.24■■□□□ 1.15
TCF3-204ENST00000453954 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
TCF3-204ENST00000453954 C8orf34Q49A92 452 aa22.23■■□□□ 1.15
TCF3-204ENST00000453954 FOXD4L1Q9NU39 408 aa22.23■■□□□ 1.15
TCF3-204ENST00000453954 MFAP1P55081 439 aaKnown RBP22.2■■□□□ 1.14
TCF3-204ENST00000453954 HSP90AA1P07900 732 aaKnown RBP22.2■■□□□ 1.14
TCF3-204ENST00000453954 IGHDP01880 384 aa22.19■■□□□ 1.14
TCF3-204ENST00000453954 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
TCF3-204ENST00000453954 PPP2R1AP30153 589 aa22.17■■□□□ 1.14
TCF3-204ENST00000453954 ARID3AQ99856 593 aa22.17■■□□□ 1.14
TCF3-204ENST00000453954 LRPPRCP42704 1394 aaKnown RBP22.16■■□□□ 1.14
TCF3-204ENST00000453954 DUSP27Q5VZP5 1158 aa22.15■■□□□ 1.14
TCF3-204ENST00000453954 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.14
TCF3-204ENST00000453954 DISP3Q9P2K9 1392 aa22.14■■□□□ 1.13
TCF3-204ENST00000453954 PNNQ9H307 717 aaKnown RBP22.14■■□□□ 1.13
TCF3-204ENST00000453954 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.13
TCF3-204ENST00000453954 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
TCF3-204ENST00000453954 ZBTB7CA1YPR0 619 aa22.12■■□□□ 1.13
TCF3-204ENST00000453954 CCDC144AA2RUR9 1427 aa22.11■■□□□ 1.13
TCF3-204ENST00000453954 TNNQ9UQP3 1299 aa22.11■■□□□ 1.13
TCF3-204ENST00000453954 PER1O15534 1290 aaPredicted RBP22.11■■□□□ 1.13
TCF3-204ENST00000453954 PANK2Q9BZ23 570 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 RSPH6AQ9H0K4 717 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 PLEKHH1Q9ULM0 1364 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 GOLGA6L3A6NEY3 463 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 PZPP20742 1482 aa22.1■■□□□ 1.13
TCF3-204ENST00000453954 CENPJQ9HC77 1338 aaPredicted RBP22.1■■□□□ 1.13
TCF3-204ENST00000453954 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
TCF3-204ENST00000453954 FTSJ3Q8IY81 847 aaKnown RBP22.08■■□□□ 1.13
TCF3-204ENST00000453954 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
TCF3-204ENST00000453954 RRAGDQ9NQL2 400 aaPredicted RBP22.08■■□□□ 1.12
TCF3-204ENST00000453954 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
TCF3-204ENST00000453954 CTTNBP2Q8WZ74 1663 aa22.07■■□□□ 1.12
TCF3-204ENST00000453954 TRIM44Q96DX7 344 aaPredicted RBP22.05■■□□□ 1.12
TCF3-204ENST00000453954 TCOF1Q13428 1488 aaKnown RBP22.05■■□□□ 1.12
TCF3-204ENST00000453954 L1TD1Q5T7N2 865 aaKnown RBP22.05■■□□□ 1.12
TCF3-204ENST00000453954 FAM43AQ8N2R8 423 aa22.04■■□□□ 1.12
TCF3-204ENST00000453954 TPRNQ4KMQ1 711 aa22.04■■□□□ 1.12
TCF3-204ENST00000453954 NCLP19338 710 aaKnown RBP22.03■■□□□ 1.12
TCF3-204ENST00000453954 SAFB2Q14151 953 aaKnown RBP eCLIP22.03■■□□□ 1.12
TCF3-204ENST00000453954 UBE2Q2Q8WVN8 375 aa22.03■■□□□ 1.12
TCF3-204ENST00000453954 KDM2BQ8NHM5 1336 aa22.03■■□□□ 1.12
TCF3-204ENST00000453954 SLFN5Q08AF3 891 aa22.02■■□□□ 1.12
TCF3-204ENST00000453954 CUL7Q14999 1698 aa22.02■■□□□ 1.12
TCF3-204ENST00000453954 GLIPR1L2Q4G1C9 344 aa22.02■■□□□ 1.12
TCF3-204ENST00000453954 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
TCF3-204ENST00000453954 CAMSAP2Q08AD1 1489 aa22.01■■□□□ 1.11
TCF3-204ENST00000453954 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
TCF3-204ENST00000453954 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
TCF3-204ENST00000453954 JPH4Q96JJ6 628 aa21.99■■□□□ 1.11
TCF3-204ENST00000453954 U2SURPO15042 1029 aaKnown RBP21.99■■□□□ 1.11
TCF3-204ENST00000453954 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
TCF3-204ENST00000453954 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
TCF3-204ENST00000453954 MORC1Q86VD1 984 aa21.97■■□□□ 1.11
TCF3-204ENST00000453954 TESK2Q96S53 571 aa21.97■■□□□ 1.11
TCF3-204ENST00000453954 TBC1D2Q9BYX2 928 aa21.97■■□□□ 1.11
TCF3-204ENST00000453954 C9orf84Q5VXU9 1444 aa21.96■■□□□ 1.11
TCF3-204ENST00000453954 GCC2Q8IWJ2 1684 aa21.96■■□□□ 1.11
TCF3-204ENST00000453954 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
TCF3-204ENST00000453954 ITPRIPQ8IWB1 547 aa21.96■■□□□ 1.11
TCF3-204ENST00000453954 E9PSI1 815 aa21.96■■□□□ 1.11
TCF3-204ENST00000453954 HSP90AA2PQ14568 343 aaPredicted RBP21.96■■□□□ 1.11
TCF3-204ENST00000453954 HSP90AB1P08238 724 aaKnown RBP21.95■■□□□ 1.1
TCF3-204ENST00000453954 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
TCF3-204ENST00000453954 ERBINQ96RT1 1412 aa21.94■■□□□ 1.1
TCF3-204ENST00000453954 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
TCF3-204ENST00000453954 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
TCF3-204ENST00000453954 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
TCF3-204ENST00000453954 MYH16Q9H6N6 1097 aa21.94■■□□□ 1.1
TCF3-204ENST00000453954 TRAK2O60296 914 aa21.92■■□□□ 1.1
TCF3-204ENST00000453954 XRCC6P12956 609 aaKnown RBP eCLIP21.92■■□□□ 1.13e-6■■■□□ 19
TCF3-204ENST00000453954 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
TCF3-204ENST00000453954 RALGAPBQ86X10 1494 aa21.92■■□□□ 1.1
TCF3-204ENST00000453954 PCDHB15Q9Y5E8 787 aa21.92■■□□□ 1.1
TCF3-204ENST00000453954 MAPK8IP3Q9UPT6 1336 aa21.91■■□□□ 1.1
TCF3-204ENST00000453954 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
TCF3-204ENST00000453954 KIAA0586Q9BVV6 1533 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms