RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
SNX17-204ENST00000453453 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
SNX17-204ENST00000453453 COL17A1Q9UMD9 1497 aaPredicted RBP23.05■■□□□ 1.28
SNX17-204ENST00000453453 NEUROD1Q13562 356 aa23.04■■□□□ 1.28
SNX17-204ENST00000453453 NUP155O75694 1391 aa23.03■■□□□ 1.28
SNX17-204ENST00000453453 YEATS2Q9ULM3 1422 aa23.02■■□□□ 1.28
SNX17-204ENST00000453453 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
SNX17-204ENST00000453453 PZPP20742 1482 aa23.01■■□□□ 1.27
SNX17-204ENST00000453453 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
SNX17-204ENST00000453453 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
SNX17-204ENST00000453453 ARHGEF40Q8TER5 1519 aa23■■□□□ 1.27
SNX17-204ENST00000453453 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
SNX17-204ENST00000453453 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
SNX17-204ENST00000453453 ATP10AO60312 1499 aa22.99■■□□□ 1.27
SNX17-204ENST00000453453 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
SNX17-204ENST00000453453 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
SNX17-204ENST00000453453 KIF3BO15066 747 aa22.97■■□□□ 1.27
SNX17-204ENST00000453453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■□□□□ 10.1
SNX17-204ENST00000453453 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
SNX17-204ENST00000453453 KANK1Q14678 1352 aa22.97■■□□□ 1.27
SNX17-204ENST00000453453 PRDM15P57071 1507 aaPredicted RBP22.95■■□□□ 1.26
SNX17-204ENST00000453453 MROH1Q8NDA8 1641 aa22.91■■□□□ 1.26
SNX17-204ENST00000453453 AGLP35573 1532 aa22.89■■□□□ 1.25
SNX17-204ENST00000453453 PKD2Q13563 968 aa22.89■■□□□ 1.25
SNX17-204ENST00000453453 VWDEQ8N2E2 1590 aa22.89■■□□□ 1.25
SNX17-204ENST00000453453 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
SNX17-204ENST00000453453 TET3O43151 1660 aa22.87■■□□□ 1.25
SNX17-204ENST00000453453 ZNF316A6NFI3 1004 aaPredicted RBP22.86■■□□□ 1.25
SNX17-204ENST00000453453 GGT6Q6P531 493 aa22.84■■□□□ 1.25
SNX17-204ENST00000453453 CEP152O94986 1710 aa22.84■■□□□ 1.25
SNX17-204ENST00000453453 ZC3H13Q5T200 1668 aaKnown RBP22.83■■□□□ 1.25
SNX17-204ENST00000453453 FOXD1Q16676 465 aa22.83■■□□□ 1.25
SNX17-204ENST00000453453 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
SNX17-204ENST00000453453 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
SNX17-204ENST00000453453 E9PCH4 1651 aa22.8■■□□□ 1.24
SNX17-204ENST00000453453 SIGLEC1Q9BZZ2 1709 aa22.79■■□□□ 1.24
SNX17-204ENST00000453453 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
SNX17-204ENST00000453453 ABCC3O15438 1527 aa22.78■■□□□ 1.24
SNX17-204ENST00000453453 EFCAB6Q5THR3 1501 aa22.78■■□□□ 1.24
SNX17-204ENST00000453453 WASHC2CQ9Y4E1 1318 aa22.77■■□□□ 1.24
SNX17-204ENST00000453453 CAMSAP1Q5T5Y3 1602 aa22.76■■□□□ 1.23
SNX17-204ENST00000453453 PPP6R1Q9UPN7 881 aa22.75■■□□□ 1.23
SNX17-204ENST00000453453 TIMELESSQ9UNS1 1208 aa22.75■■□□□ 1.23
SNX17-204ENST00000453453 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
SNX17-204ENST00000453453 SPHKAPQ2M3C7 1700 aa22.74■■□□□ 1.23
SNX17-204ENST00000453453 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
SNX17-204ENST00000453453 RPRD2Q5VT52 1461 aaKnown RBP22.72■■□□□ 1.23
SNX17-204ENST00000453453 CCDC144AA2RUR9 1427 aa22.69■■□□□ 1.22
SNX17-204ENST00000453453 CLTCQ00610 1675 aaKnown RBP22.68■■□□□ 1.22
SNX17-204ENST00000453453 MLECQ14165 292 aa22.68■■□□□ 1.22
SNX17-204ENST00000453453 TRPM2O94759 1503 aa22.68■■□□□ 1.22
SNX17-204ENST00000453453 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
SNX17-204ENST00000453453 ARHGAP31Q2M1Z3 1444 aa22.66■■□□□ 1.22
SNX17-204ENST00000453453 PTPRTO14522 1441 aa22.65■■□□□ 1.22
SNX17-204ENST00000453453 PLA2R1Q13018 1463 aa22.65■■□□□ 1.22
SNX17-204ENST00000453453 NPATQ14207 1427 aa22.65■■□□□ 1.22
SNX17-204ENST00000453453 CFAP65Q6ZU64 1925 aaKnown RBP22.63■■□□□ 1.21
SNX17-204ENST00000453453 CNTLNQ9NXG0 1405 aa22.61■■□□□ 1.21
SNX17-204ENST00000453453 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
SNX17-204ENST00000453453 PREX1Q8TCU6 1659 aa22.59■■□□□ 1.21
SNX17-204ENST00000453453 CLTCL1P53675 1640 aa22.59■■□□□ 1.21
SNX17-204ENST00000453453 FER1L4A9Z1Z3 1794 aa22.58■■□□□ 1.21
SNX17-204ENST00000453453 KIF1BO60333 1816 aa22.57■■□□□ 1.2
SNX17-204ENST00000453453 NOS1P29475 1434 aa22.55■■□□□ 1.2
SNX17-204ENST00000453453 L3MBTL2Q969R5 705 aa22.53■■□□□ 1.2
SNX17-204ENST00000453453 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
SNX17-204ENST00000453453 ERVK-7P63135 1459 aa22.52■■□□□ 1.2
SNX17-204ENST00000453453 SYNMO15061 1565 aa22.52■■□□□ 1.2
SNX17-204ENST00000453453 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
SNX17-204ENST00000453453 NEURL4Q96JN8 1562 aa22.51■■□□□ 1.19
SNX17-204ENST00000453453 UGGT1Q9NYU2 1555 aa22.5■■□□□ 1.19
SNX17-204ENST00000453453 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
SNX17-204ENST00000453453 SPATA31D1Q6ZQQ2 1576 aa22.49■■□□□ 1.19
SNX17-204ENST00000453453 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
SNX17-204ENST00000453453 SLC52A1Q9NWF4 448 aa22.46■■□□□ 1.19
SNX17-204ENST00000453453 MADDQ8WXG6 1647 aa22.45■■□□□ 1.18
SNX17-204ENST00000453453 RGL3Q3MIN7 710 aa22.45■■□□□ 1.18
SNX17-204ENST00000453453 C3P01024 1663 aa22.44■■□□□ 1.18
SNX17-204ENST00000453453 FBXO31Q5XUX0 539 aaPredicted RBP22.44■■□□□ 1.18
SNX17-204ENST00000453453 ADAMTSL3P82987 1691 aa22.44■■□□□ 1.18
SNX17-204ENST00000453453 RIMS1Q86UR5 1692 aaKnown RBP22.44■■□□□ 1.18
SNX17-204ENST00000453453 ADGRB3O60242 1522 aa22.43■■□□□ 1.18
SNX17-204ENST00000453453 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
SNX17-204ENST00000453453 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
SNX17-204ENST00000453453 MIER1Q8N108 512 aa22.41■■□□□ 1.18
SNX17-204ENST00000453453 STAC3Q96MF2 364 aa22.39■■□□□ 1.18
SNX17-204ENST00000453453 TNRQ92752 1358 aa22.39■■□□□ 1.17
SNX17-204ENST00000453453 UHRF1BP1Q6BDS2 1440 aa22.38■■□□□ 1.17
SNX17-204ENST00000453453 IDI1Q13907 227 aa22.38■■□□□ 1.17
SNX17-204ENST00000453453 KDM2AQ9Y2K7 1162 aa22.38■■□□□ 1.17
SNX17-204ENST00000453453 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
SNX17-204ENST00000453453 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
SNX17-204ENST00000453453 TMEM131LA2VDJ0 1609 aa22.35■■□□□ 1.17
SNX17-204ENST00000453453 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
SNX17-204ENST00000453453 RPGRIP1LQ68CZ1 1315 aa22.34■■□□□ 1.17
SNX17-204ENST00000453453 STAG3Q9UJ98 1225 aa22.34■■□□□ 1.17
SNX17-204ENST00000453453 PPLO60437 1756 aa22.34■■□□□ 1.17
SNX17-204ENST00000453453 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
SNX17-204ENST00000453453 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
SNX17-204ENST00000453453 NBPF8Q3BBV2 869 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms