RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 CARMIL2Q6F5E8 1435 aa21■□□□□ 0.95
TRA2B-205ENST00000453386 KTN1Q86UP2 1357 aaKnown RBP20.99■□□□□ 0.95
TRA2B-205ENST00000453386 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
TRA2B-205ENST00000453386 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
TRA2B-205ENST00000453386 ARHGEF12Q9NZN5 1544 aa20.98■□□□□ 0.95
TRA2B-205ENST00000453386 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
TRA2B-205ENST00000453386 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
TRA2B-205ENST00000453386 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
TRA2B-205ENST00000453386 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
TRA2B-205ENST00000453386 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
TRA2B-205ENST00000453386 NBPF1Q3BBV0 1214 aa20.92■□□□□ 0.94
TRA2B-205ENST00000453386 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
TRA2B-205ENST00000453386 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
TRA2B-205ENST00000453386 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
TRA2B-205ENST00000453386 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
TRA2B-205ENST00000453386 PDE3BQ13370 1112 aa20.91■□□□□ 0.94
TRA2B-205ENST00000453386 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
TRA2B-205ENST00000453386 TCERG1O14776 1098 aaKnown RBP20.91■□□□□ 0.94
TRA2B-205ENST00000453386 SYNJ2O15056 1496 aa20.89■□□□□ 0.93
TRA2B-205ENST00000453386 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.93
TRA2B-205ENST00000453386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.933e-8■□□□□ 11.2
TRA2B-205ENST00000453386 ATP10BO94823 1461 aa20.89■□□□□ 0.93
TRA2B-205ENST00000453386 PARD3Q8TEW0 1356 aa20.88■□□□□ 0.93
TRA2B-205ENST00000453386 PDE4AP27815 886 aa20.88■□□□□ 0.93
TRA2B-205ENST00000453386 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
TRA2B-205ENST00000453386 PER1O15534 1290 aaPredicted RBP20.87■□□□□ 0.93
TRA2B-205ENST00000453386 PLIN1O60240 522 aa20.87■□□□□ 0.93
TRA2B-205ENST00000453386 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
TRA2B-205ENST00000453386 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
TRA2B-205ENST00000453386 PTPRGP23470 1445 aa20.86■□□□□ 0.93
TRA2B-205ENST00000453386 PRAG1Q86YV5 1406 aa20.84■□□□□ 0.93
TRA2B-205ENST00000453386 PANK3Q9H999 370 aa20.83■□□□□ 0.93
TRA2B-205ENST00000453386 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
TRA2B-205ENST00000453386 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
TRA2B-205ENST00000453386 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
TRA2B-205ENST00000453386 E9PCH4 1651 aa20.8■□□□□ 0.92
TRA2B-205ENST00000453386 NUP160Q12769 1436 aa20.8■□□□□ 0.92
TRA2B-205ENST00000453386 MS4A1P11836 297 aa20.79■□□□□ 0.92
TRA2B-205ENST00000453386 LAS1LQ9Y4W2 734 aaKnown RBP20.79■□□□□ 0.92
TRA2B-205ENST00000453386 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
TRA2B-205ENST00000453386 ABCA8O94911 1581 aa20.79■□□□□ 0.92
TRA2B-205ENST00000453386 TESK2Q96S53 571 aa20.78■□□□□ 0.92
TRA2B-205ENST00000453386 CRBNQ96SW2 442 aa20.78■□□□□ 0.92
TRA2B-205ENST00000453386 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
TRA2B-205ENST00000453386 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.92
TRA2B-205ENST00000453386 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.92
TRA2B-205ENST00000453386 SKAP1Q86WV1 359 aa20.77■□□□□ 0.92
TRA2B-205ENST00000453386 TMF1P82094 1093 aa20.76■□□□□ 0.91
TRA2B-205ENST00000453386 ARHGEF5Q12774 1597 aa20.75■□□□□ 0.91
TRA2B-205ENST00000453386 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
TRA2B-205ENST00000453386 GPRASP1Q5JY77 1395 aa20.74■□□□□ 0.91
TRA2B-205ENST00000453386 NEFMP07197 916 aa20.73■□□□□ 0.91
TRA2B-205ENST00000453386 COL17A1Q9UMD9 1497 aaPredicted RBP20.73■□□□□ 0.91
TRA2B-205ENST00000453386 A2MP01023 1474 aa20.73■□□□□ 0.91
TRA2B-205ENST00000453386 PLA2R1Q13018 1463 aa20.73■□□□□ 0.91
TRA2B-205ENST00000453386 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
TRA2B-205ENST00000453386 ADAMTS8Q9UP79 889 aa20.72■□□□□ 0.91
TRA2B-205ENST00000453386 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
TRA2B-205ENST00000453386 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
TRA2B-205ENST00000453386 SAMD9LQ8IVG5 1584 aa20.69■□□□□ 0.9
TRA2B-205ENST00000453386 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRA2B-205ENST00000453386 KNSTRNQ9Y448 316 aa20.67■□□□□ 0.9
TRA2B-205ENST00000453386 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
TRA2B-205ENST00000453386 INSRP06213 1382 aa20.65■□□□□ 0.9
TRA2B-205ENST00000453386 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
TRA2B-205ENST00000453386 PRDM15P57071 1507 aaPredicted RBP20.64■□□□□ 0.9
TRA2B-205ENST00000453386 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
TRA2B-205ENST00000453386 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
TRA2B-205ENST00000453386 ARHGAP5Q13017 1502 aa20.63■□□□□ 0.89
TRA2B-205ENST00000453386 DDRGK1Q96HY6 314 aa20.63■□□□□ 0.89
TRA2B-205ENST00000453386 CDC42BPBQ9Y5S2 1711 aa20.62■□□□□ 0.89
TRA2B-205ENST00000453386 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
TRA2B-205ENST00000453386 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
TRA2B-205ENST00000453386 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
TRA2B-205ENST00000453386 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
TRA2B-205ENST00000453386 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
TRA2B-205ENST00000453386 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
TRA2B-205ENST00000453386 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.88
TRA2B-205ENST00000453386 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.88
TRA2B-205ENST00000453386 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
TRA2B-205ENST00000453386 UNC13BO14795 1591 aa20.57■□□□□ 0.88
TRA2B-205ENST00000453386 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
TRA2B-205ENST00000453386 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
TRA2B-205ENST00000453386 LAMC1P11047 1609 aa20.56■□□□□ 0.88
TRA2B-205ENST00000453386 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
TRA2B-205ENST00000453386 MAGI2Q86UL8 1455 aa20.56■□□□□ 0.88
TRA2B-205ENST00000453386 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
TRA2B-205ENST00000453386 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
TRA2B-205ENST00000453386 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
TRA2B-205ENST00000453386 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
TRA2B-205ENST00000453386 WDR7Q9Y4E6 1490 aa20.53■□□□□ 0.88
TRA2B-205ENST00000453386 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
TRA2B-205ENST00000453386 RGS3P49796 1198 aa20.52■□□□□ 0.88
TRA2B-205ENST00000453386 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
TRA2B-205ENST00000453386 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.87
TRA2B-205ENST00000453386 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
TRA2B-205ENST00000453386 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
TRA2B-205ENST00000453386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.5■□□□□ 0.872e-9■■■□□ 17.4
TRA2B-205ENST00000453386 ATP10AO60312 1499 aa20.5■□□□□ 0.87
TRA2B-205ENST00000453386 ZNF521Q96K83 1311 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms