RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
LINC00393-202ENST00000452852 Q6ZNB5 142 aa9.66□□□□□ -0.86
LINC00393-202ENST00000452852 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
LINC00393-202ENST00000452852 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 HRO43593 1189 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 PTPN5P54829 565 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 EPAS1Q99814 870 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 ADAM33Q9BZ11 813 aa9.64□□□□□ -0.87
LINC00393-202ENST00000452852 A0A0G2JS52 829 aa9.63□□□□□ -0.87
LINC00393-202ENST00000452852 NBR1Q14596 966 aa9.63□□□□□ -0.87
LINC00393-202ENST00000452852 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
LINC00393-202ENST00000452852 SEMA3EO15041 775 aa9.62□□□□□ -0.87
LINC00393-202ENST00000452852 MLLT3P42568 568 aaPredicted RBP9.62□□□□□ -0.87
LINC00393-202ENST00000452852 PSEN2P49810 448 aa9.62□□□□□ -0.87
LINC00393-202ENST00000452852 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
LINC00393-202ENST00000452852 RBM33Q96EV2 1170 aaKnown RBP9.61□□□□□ -0.87
LINC00393-202ENST00000452852 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
LINC00393-202ENST00000452852 KCNK17Q96T54 332 aa9.6□□□□□ -0.87
LINC00393-202ENST00000452852 OSBPP22059 807 aa9.59□□□□□ -0.87
LINC00393-202ENST00000452852 PTPREP23469 700 aa9.59□□□□□ -0.87
LINC00393-202ENST00000452852 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
LINC00393-202ENST00000452852 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
LINC00393-202ENST00000452852 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
LINC00393-202ENST00000452852 TESPA1A2RU30 521 aaPredicted RBP9.56□□□□□ -0.88
LINC00393-202ENST00000452852 MAP3K7O43318 606 aa9.56□□□□□ -0.88
LINC00393-202ENST00000452852 C6orf132Q5T0Z8 1188 aa9.56□□□□□ -0.88
LINC00393-202ENST00000452852 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
LINC00393-202ENST00000452852 COL9A1P20849 921 aa9.54□□□□□ -0.88
LINC00393-202ENST00000452852 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
LINC00393-202ENST00000452852 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
LINC00393-202ENST00000452852 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
LINC00393-202ENST00000452852 CDHR5Q9HBB8 845 aa9.5□□□□□ -0.89
LINC00393-202ENST00000452852 SMYD5Q6GMV2 418 aa9.49□□□□□ -0.89
LINC00393-202ENST00000452852 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
LINC00393-202ENST00000452852 VPS9D1Q9Y2B5 631 aa9.49□□□□□ -0.89
LINC00393-202ENST00000452852 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
LINC00393-202ENST00000452852 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
LINC00393-202ENST00000452852 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
LINC00393-202ENST00000452852 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.9
LINC00393-202ENST00000452852 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
LINC00393-202ENST00000452852 NPDC1Q9NQX5 325 aaPredicted RBP9.45□□□□□ -0.9
LINC00393-202ENST00000452852 CERKQ8TCT0 537 aa9.44□□□□□ -0.9
LINC00393-202ENST00000452852 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
LINC00393-202ENST00000452852 PRSS12P56730 875 aa9.42□□□□□ -0.9
LINC00393-202ENST00000452852 WNT2BQ93097 391 aa9.42□□□□□ -0.9
LINC00393-202ENST00000452852 CDCA7LQ96GN5 454 aa9.42□□□□□ -0.9
LINC00393-202ENST00000452852 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
LINC00393-202ENST00000452852 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
LINC00393-202ENST00000452852 PTGDRQ13258 359 aa9.41□□□□□ -0.9
LINC00393-202ENST00000452852 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
LINC00393-202ENST00000452852 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
LINC00393-202ENST00000452852 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
LINC00393-202ENST00000452852 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
LINC00393-202ENST00000452852 FAM198AQ9UFP1 575 aa9.4□□□□□ -0.9
LINC00393-202ENST00000452852 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
LINC00393-202ENST00000452852 FCHSD2O94868 740 aa9.38□□□□□ -0.91
LINC00393-202ENST00000452852 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
LINC00393-202ENST00000452852 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
LINC00393-202ENST00000452852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00393-202ENST00000452852 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
LINC00393-202ENST00000452852 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
LINC00393-202ENST00000452852 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
LINC00393-202ENST00000452852 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
LINC00393-202ENST00000452852 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
LINC00393-202ENST00000452852 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
LINC00393-202ENST00000452852 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
LINC00393-202ENST00000452852 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
LINC00393-202ENST00000452852 GPR37O15354 613 aa9.34□□□□□ -0.91
LINC00393-202ENST00000452852 SMAPO00193 183 aa9.33□□□□□ -0.92
LINC00393-202ENST00000452852 HIC1Q14526 733 aa9.33□□□□□ -0.92
LINC00393-202ENST00000452852 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
LINC00393-202ENST00000452852 BCANQ96GW7 911 aa9.33□□□□□ -0.92
LINC00393-202ENST00000452852 NUDT18Q6ZVK8 323 aa9.32□□□□□ -0.92
LINC00393-202ENST00000452852 TATDN2Q93075 761 aa9.32□□□□□ -0.92
LINC00393-202ENST00000452852 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
LINC00393-202ENST00000452852 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
LINC00393-202ENST00000452852 GNPATO15228 680 aa9.31□□□□□ -0.92
LINC00393-202ENST00000452852 GFRA3O60609 400 aa9.31□□□□□ -0.92
LINC00393-202ENST00000452852 ITGBL1O95965 494 aaPredicted RBP9.31□□□□□ -0.92
LINC00393-202ENST00000452852 FECHP22830 423 aa9.31□□□□□ -0.92
LINC00393-202ENST00000452852 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
LINC00393-202ENST00000452852 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
LINC00393-202ENST00000452852 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
LINC00393-202ENST00000452852 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
LINC00393-202ENST00000452852 EYA1Q99502 592 aa9.27□□□□□ -0.93
LINC00393-202ENST00000452852 ADGRG1Q9Y653 693 aa9.27□□□□□ -0.93
LINC00393-202ENST00000452852 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
LINC00393-202ENST00000452852 LCE2BO14633 110 aa9.24□□□□□ -0.93
LINC00393-202ENST00000452852 KCNC4Q03721 635 aa9.24□□□□□ -0.93
LINC00393-202ENST00000452852 ANKK1Q8NFD2 765 aa9.24□□□□□ -0.93
LINC00393-202ENST00000452852 BCAMP50895 628 aa9.23□□□□□ -0.93
LINC00393-202ENST00000452852 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
LINC00393-202ENST00000452852 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
LINC00393-202ENST00000452852 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
LINC00393-202ENST00000452852 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
LINC00393-202ENST00000452852 OATP04181 439 aa9.21□□□□□ -0.94
LINC00393-202ENST00000452852 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
LINC00393-202ENST00000452852 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
LINC00393-202ENST00000452852 RCCD1A6NED2 376 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 833.6 ms