RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SYCP2Q9BX26 1530 aa20.9■□□□□ 0.94
AC004540.1-204ENST00000449537 LRRIQ1Q96JM4 1722 aa20.89■□□□□ 0.93
AC004540.1-204ENST00000449537 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
AC004540.1-204ENST00000449537 KIAA1107Q9UPP5 1409 aa20.87■□□□□ 0.93
AC004540.1-204ENST00000449537 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
AC004540.1-204ENST00000449537 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
AC004540.1-204ENST00000449537 DEPDC5O75140 1603 aa20.85■□□□□ 0.93
AC004540.1-204ENST00000449537 FAM135AQ9P2D6 1515 aa20.84■□□□□ 0.93
AC004540.1-204ENST00000449537 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
AC004540.1-204ENST00000449537 INO80Q9ULG1 1556 aaPredicted RBP20.84■□□□□ 0.93
AC004540.1-204ENST00000449537 PLEKHH2Q8IVE3 1493 aa20.83■□□□□ 0.93
AC004540.1-204ENST00000449537 STRCP1A6NGW2 1772 aa20.83■□□□□ 0.93
AC004540.1-204ENST00000449537 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.92
AC004540.1-204ENST00000449537 UGGT1Q9NYU2 1555 aa20.82■□□□□ 0.92
AC004540.1-204ENST00000449537 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 WASHC2CQ9Y4E1 1318 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 KIF3BO15066 747 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 PZPP20742 1482 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 NLRP1Q9C000 1473 aa20.81■□□□□ 0.92
AC004540.1-204ENST00000449537 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
AC004540.1-204ENST00000449537 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
AC004540.1-204ENST00000449537 UPF1Q92900 1129 aaKnown RBP eCLIP20.79■□□□□ 0.92
AC004540.1-204ENST00000449537 SYNMO15061 1565 aa20.79■□□□□ 0.92
AC004540.1-204ENST00000449537 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
AC004540.1-204ENST00000449537 CASKIN1Q8WXD9 1431 aa20.76■□□□□ 0.91
AC004540.1-204ENST00000449537 SETD1AO15047 1707 aaKnown RBP20.75■□□□□ 0.91
AC004540.1-204ENST00000449537 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
AC004540.1-204ENST00000449537 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
AC004540.1-204ENST00000449537 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
AC004540.1-204ENST00000449537 ZNF644Q9H582 1327 aaPredicted RBP20.69■□□□□ 0.9
AC004540.1-204ENST00000449537 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
AC004540.1-204ENST00000449537 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
AC004540.1-204ENST00000449537 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
AC004540.1-204ENST00000449537 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.89
AC004540.1-204ENST00000449537 ZC3H13Q5T200 1668 aaKnown RBP20.64■□□□□ 0.89
AC004540.1-204ENST00000449537 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
AC004540.1-204ENST00000449537 LTKP29376 864 aa20.63■□□□□ 0.89
AC004540.1-204ENST00000449537 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
AC004540.1-204ENST00000449537 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
AC004540.1-204ENST00000449537 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
AC004540.1-204ENST00000449537 JCADQ9P266 1359 aa20.6■□□□□ 0.89
AC004540.1-204ENST00000449537 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
AC004540.1-204ENST00000449537 ROBO1Q9Y6N7 1651 aa20.6■□□□□ 0.89
AC004540.1-204ENST00000449537 PROSER2Q86WR7 435 aaPredicted RBP20.59■□□□□ 0.89
AC004540.1-204ENST00000449537 FYCO1Q9BQS8 1478 aa20.57■□□□□ 0.88
AC004540.1-204ENST00000449537 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
AC004540.1-204ENST00000449537 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
AC004540.1-204ENST00000449537 KCNA6P17658 529 aa20.55■□□□□ 0.88
AC004540.1-204ENST00000449537 RXRBP28702 533 aa20.55■□□□□ 0.88
AC004540.1-204ENST00000449537 SLAIN2Q9P270 581 aa20.55■□□□□ 0.88
AC004540.1-204ENST00000449537 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
AC004540.1-204ENST00000449537 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
AC004540.1-204ENST00000449537 ERVK-7P63135 1459 aa20.52■□□□□ 0.88
AC004540.1-204ENST00000449537 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
AC004540.1-204ENST00000449537 SPATA31A6Q5VVP1 1343 aa20.52■□□□□ 0.87
AC004540.1-204ENST00000449537 ARHGAP23Q9P227 1491 aa20.51■□□□□ 0.87
AC004540.1-204ENST00000449537 UBR1Q8IWV7 1749 aa20.51■□□□□ 0.87
AC004540.1-204ENST00000449537 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
AC004540.1-204ENST00000449537 SLIT1O75093 1534 aa20.5■□□□□ 0.87
AC004540.1-204ENST00000449537 PHLPP1O60346 1717 aa20.5■□□□□ 0.87
AC004540.1-204ENST00000449537 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-204ENST00000449537 TSPY4P0CV99 314 aa20.49■□□□□ 0.87
AC004540.1-204ENST00000449537 TSPY10P0CW01 314 aa20.49■□□□□ 0.87
AC004540.1-204ENST00000449537 CCDC141Q6ZP82 1450 aa20.48■□□□□ 0.87
AC004540.1-204ENST00000449537 MSH6P52701 1360 aa20.47■□□□□ 0.87
AC004540.1-204ENST00000449537 ABCC3O15438 1527 aa20.47■□□□□ 0.87
AC004540.1-204ENST00000449537 SRCAPQ6ZRS2 3230 aa20.45■□□□□ 0.86
AC004540.1-204ENST00000449537 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
AC004540.1-204ENST00000449537 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
AC004540.1-204ENST00000449537 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
AC004540.1-204ENST00000449537 MAP3K1Q13233 1512 aa20.44■□□□□ 0.86
AC004540.1-204ENST00000449537 LRP6O75581 1613 aa20.44■□□□□ 0.86
AC004540.1-204ENST00000449537 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
AC004540.1-204ENST00000449537 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
AC004540.1-204ENST00000449537 FGD6Q6ZV73 1430 aa20.42■□□□□ 0.86
AC004540.1-204ENST00000449537 PRDM15P57071 1507 aaPredicted RBP20.41■□□□□ 0.86
AC004540.1-204ENST00000449537 FOXD1Q16676 465 aa20.38■□□□□ 0.85
AC004540.1-204ENST00000449537 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
AC004540.1-204ENST00000449537 BCANQ96GW7 911 aa20.37■□□□□ 0.85
AC004540.1-204ENST00000449537 NUTM2BA6NNL0 878 aaPredicted RBP20.36■□□□□ 0.85
AC004540.1-204ENST00000449537 NUTM2EB1AL46 878 aaPredicted RBP20.36■□□□□ 0.85
AC004540.1-204ENST00000449537 NUTM2AQ8IVF1 878 aaPredicted RBP20.36■□□□□ 0.85
AC004540.1-204ENST00000449537 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
AC004540.1-204ENST00000449537 CAMSAP2Q08AD1 1489 aa20.36■□□□□ 0.85
AC004540.1-204ENST00000449537 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
AC004540.1-204ENST00000449537 ZRANB1Q9UGI0 708 aa20.35■□□□□ 0.85
AC004540.1-204ENST00000449537 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
AC004540.1-204ENST00000449537 AFF2P51816 1311 aa20.33■□□□□ 0.85
AC004540.1-204ENST00000449537 TET3O43151 1660 aa20.33■□□□□ 0.85
AC004540.1-204ENST00000449537 CEP152O94986 1710 aa20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 RBM6P78332 1123 aaKnown RBP20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 IDI1Q13907 227 aa20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 EHBP1L1Q8N3D4 1523 aa20.31■□□□□ 0.84
AC004540.1-204ENST00000449537 C14orf37Q86TY3 774 aa20.3■□□□□ 0.84
AC004540.1-204ENST00000449537 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
AC004540.1-204ENST00000449537 ARHGEF5Q12774 1597 aa20.29■□□□□ 0.84
AC004540.1-204ENST00000449537 NWD1Q149M9 1564 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms