RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
SYNGAP1-204ENST00000449372 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
SYNGAP1-204ENST00000449372 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 ABCC1P33527 1531 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
SYNGAP1-204ENST00000449372 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SYNGAP1-204ENST00000449372 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
SYNGAP1-204ENST00000449372 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 ABCA9Q8IUA7 1624 aa18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 MAGI2Q86UL8 1455 aa18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
SYNGAP1-204ENST00000449372 SPATA31E1Q6ZUB1 1445 aa18.17■□□□□ 0.5
SYNGAP1-204ENST00000449372 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 WDR7Q9Y4E6 1490 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 NUP155O75694 1391 aa18.15■□□□□ 0.5
SYNGAP1-204ENST00000449372 PKD2Q13563 968 aa18.14■□□□□ 0.49
SYNGAP1-204ENST00000449372 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
SYNGAP1-204ENST00000449372 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 NEFMP07197 916 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 UHRF1BP1Q6BDS2 1440 aa18.12■□□□□ 0.49
SYNGAP1-204ENST00000449372 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
SYNGAP1-204ENST00000449372 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-204ENST00000449372 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
SYNGAP1-204ENST00000449372 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-204ENST00000449372 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■■■ 32.2
SYNGAP1-204ENST00000449372 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 DEPDC5O75140 1603 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 EFCAB2Q5VUJ9 269 aa18.06■□□□□ 0.48
SYNGAP1-204ENST00000449372 KDM5CP41229 1560 aa18.06■□□□□ 0.48
SYNGAP1-204ENST00000449372 ATP10AO60312 1499 aa18.05■□□□□ 0.48
SYNGAP1-204ENST00000449372 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
SYNGAP1-204ENST00000449372 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
SYNGAP1-204ENST00000449372 BCORL1Q5H9F3 1711 aa18.03■□□□□ 0.48
SYNGAP1-204ENST00000449372 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
SYNGAP1-204ENST00000449372 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
SYNGAP1-204ENST00000449372 FANCAO15360 1455 aa18.01■□□□□ 0.47
SYNGAP1-204ENST00000449372 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
SYNGAP1-204ENST00000449372 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
SYNGAP1-204ENST00000449372 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
SYNGAP1-204ENST00000449372 CCDC7Q96M83 1385 aa17.99■□□□□ 0.47
SYNGAP1-204ENST00000449372 E9PCH4 1651 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.46
SYNGAP1-204ENST00000449372 PPM1GO15355 546 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-204ENST00000449372 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
SYNGAP1-204ENST00000449372 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-204ENST00000449372 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 LAMC1P11047 1609 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 A2MP01023 1474 aa17.92■□□□□ 0.46
SYNGAP1-204ENST00000449372 TET3O43151 1660 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 USP47Q96K76 1375 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
SYNGAP1-204ENST00000449372 CEP152O94986 1710 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 TRPM2O94759 1503 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 PTPRTO14522 1441 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
SYNGAP1-204ENST00000449372 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
SYNGAP1-204ENST00000449372 NEURL4Q96JN8 1562 aa17.85■□□□□ 0.45
SYNGAP1-204ENST00000449372 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
SYNGAP1-204ENST00000449372 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.451e-6■■■■□ 21.3
SYNGAP1-204ENST00000449372 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.45
SYNGAP1-204ENST00000449372 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
SYNGAP1-204ENST00000449372 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 LMTK2Q8IWU2 1503 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MLH3Q9UHC1 1453 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms