RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
RFX3-207ENST00000449190 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
RFX3-207ENST00000449190 FGD6Q6ZV73 1430 aa13.97□□□□□ -0.17
RFX3-207ENST00000449190 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
RFX3-207ENST00000449190 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
RFX3-207ENST00000449190 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
RFX3-207ENST00000449190 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
RFX3-207ENST00000449190 TCOF1Q13428 1488 aaKnown RBP13.94□□□□□ -0.18
RFX3-207ENST00000449190 ABCC5O15440 1437 aa13.94□□□□□ -0.18
RFX3-207ENST00000449190 CAPN15O75808 1086 aa13.94□□□□□ -0.18
RFX3-207ENST00000449190 ADGBQ8N7X0 1667 aa13.94□□□□□ -0.18
RFX3-207ENST00000449190 HSPA2P54652 639 aa13.92□□□□□ -0.18
RFX3-207ENST00000449190 RRP7BPQ9NSQ0 103 aa13.92□□□□□ -0.18
RFX3-207ENST00000449190 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
RFX3-207ENST00000449190 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
RFX3-207ENST00000449190 WASHC2CQ9Y4E1 1318 aa13.91□□□□□ -0.18
RFX3-207ENST00000449190 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
RFX3-207ENST00000449190 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
RFX3-207ENST00000449190 DAPK1P53355 1430 aa13.9□□□□□ -0.18
RFX3-207ENST00000449190 CHIC2Q9UKJ5 165 aa13.9□□□□□ -0.18
RFX3-207ENST00000449190 ITGAEP38570 1179 aa13.89□□□□□ -0.19
RFX3-207ENST00000449190 NPATQ14207 1427 aa13.89□□□□□ -0.19
RFX3-207ENST00000449190 ANKRD30AQ9BXX3 1397 aa13.88□□□□□ -0.19
RFX3-207ENST00000449190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.88□□□□□ -0.19
RFX3-207ENST00000449190 UHRF1BP1Q6BDS2 1440 aa13.88□□□□□ -0.19
RFX3-207ENST00000449190 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
RFX3-207ENST00000449190 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
RFX3-207ENST00000449190 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
RFX3-207ENST00000449190 C3P01024 1663 aa13.85□□□□□ -0.19
RFX3-207ENST00000449190 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
RFX3-207ENST00000449190 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
RFX3-207ENST00000449190 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
RFX3-207ENST00000449190 MROH2AA6NES4 1674 aa13.85□□□□□ -0.19
RFX3-207ENST00000449190 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
RFX3-207ENST00000449190 FBXO31Q5XUX0 539 aaPredicted RBP13.84□□□□□ -0.19
RFX3-207ENST00000449190 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
RFX3-207ENST00000449190 ERBINQ96RT1 1412 aa13.82□□□□□ -0.2
RFX3-207ENST00000449190 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
RFX3-207ENST00000449190 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
RFX3-207ENST00000449190 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
RFX3-207ENST00000449190 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
RFX3-207ENST00000449190 TNRQ92752 1358 aa13.79□□□□□ -0.2
RFX3-207ENST00000449190 PZPP20742 1482 aa13.79□□□□□ -0.2
RFX3-207ENST00000449190 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
RFX3-207ENST00000449190 KANK1Q14678 1352 aa13.78□□□□□ -0.2
RFX3-207ENST00000449190 CROCC2H7BZ55 1655 aa13.77□□□□□ -0.21
RFX3-207ENST00000449190 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
RFX3-207ENST00000449190 ROCK1Q13464 1354 aa13.77□□□□□ -0.21
RFX3-207ENST00000449190 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
RFX3-207ENST00000449190 PKD2Q13563 968 aa13.76□□□□□ -0.21
RFX3-207ENST00000449190 THEMISQ8N1K5 641 aaPredicted RBP13.76□□□□□ -0.21
RFX3-207ENST00000449190 ABCC3O15438 1527 aa13.75□□□□□ -0.21
RFX3-207ENST00000449190 ANKRD50Q9ULJ7 1429 aa13.75□□□□□ -0.21
RFX3-207ENST00000449190 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
RFX3-207ENST00000449190 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
RFX3-207ENST00000449190 PTPRTO14522 1441 aa13.73□□□□□ -0.21
RFX3-207ENST00000449190 NCKAP5LQ9HCH0 1330 aa13.73□□□□□ -0.21
RFX3-207ENST00000449190 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
RFX3-207ENST00000449190 NLRP1Q9C000 1473 aa13.71□□□□□ -0.21
RFX3-207ENST00000449190 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
RFX3-207ENST00000449190 ZC3H13Q5T200 1668 aaKnown RBP13.7□□□□□ -0.22
RFX3-207ENST00000449190 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
RFX3-207ENST00000449190 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
RFX3-207ENST00000449190 CAMSAP1Q5T5Y3 1602 aa13.7□□□□□ -0.22
RFX3-207ENST00000449190 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
RFX3-207ENST00000449190 ERVK-7P63135 1459 aa13.69□□□□□ -0.22
RFX3-207ENST00000449190 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
RFX3-207ENST00000449190 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
RFX3-207ENST00000449190 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
RFX3-207ENST00000449190 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
RFX3-207ENST00000449190 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
RFX3-207ENST00000449190 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
RFX3-207ENST00000449190 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
RFX3-207ENST00000449190 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
RFX3-207ENST00000449190 FBXO41Q8TF61 875 aa13.67□□□□□ -0.22
RFX3-207ENST00000449190 IDI1Q13907 227 aa13.66□□□□□ -0.22
RFX3-207ENST00000449190 SLC52A1Q9NWF4 448 aa13.66□□□□□ -0.22
RFX3-207ENST00000449190 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
RFX3-207ENST00000449190 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.22
RFX3-207ENST00000449190 NUP155O75694 1391 aa13.65□□□□□ -0.22
RFX3-207ENST00000449190 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
RFX3-207ENST00000449190 CEP152O94986 1710 aa13.64□□□□□ -0.23
RFX3-207ENST00000449190 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
RFX3-207ENST00000449190 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
RFX3-207ENST00000449190 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
RFX3-207ENST00000449190 NAIPQ13075 1403 aa13.64□□□□□ -0.23
RFX3-207ENST00000449190 NOS1P29475 1434 aa13.63□□□□□ -0.23
RFX3-207ENST00000449190 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
RFX3-207ENST00000449190 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
RFX3-207ENST00000449190 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
RFX3-207ENST00000449190 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
RFX3-207ENST00000449190 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
RFX3-207ENST00000449190 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
RFX3-207ENST00000449190 HRCP23327 699 aa13.59□□□□□ -0.23
RFX3-207ENST00000449190 LTKP29376 864 aa13.59□□□□□ -0.23
RFX3-207ENST00000449190 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
RFX3-207ENST00000449190 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
RFX3-207ENST00000449190 MED14O60244 1454 aa13.58□□□□□ -0.24
RFX3-207ENST00000449190 EFCAB6Q5THR3 1501 aa13.58□□□□□ -0.24
RFX3-207ENST00000449190 UNC13BO14795 1591 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms