RNA–Protein interactions for RNA: ENST00000448693.2

SPCS1-203, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-203ENST00000448693 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
SPCS1-203ENST00000448693 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
SPCS1-203ENST00000448693 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
SPCS1-203ENST00000448693 MBD5Q9P267 1494 aa15.85■□□□□ 0.13
SPCS1-203ENST00000448693 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
SPCS1-203ENST00000448693 SPDYE4A6NLX3 237 aa15.83■□□□□ 0.12
SPCS1-203ENST00000448693 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
SPCS1-203ENST00000448693 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.12
SPCS1-203ENST00000448693 A2MP01023 1474 aa15.82■□□□□ 0.12
SPCS1-203ENST00000448693 CCDC141Q6ZP82 1450 aa15.82■□□□□ 0.12
SPCS1-203ENST00000448693 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
SPCS1-203ENST00000448693 ARHGEF5Q12774 1597 aa15.82■□□□□ 0.12
SPCS1-203ENST00000448693 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
SPCS1-203ENST00000448693 STRCQ7RTU9 1775 aa15.8■□□□□ 0.12
SPCS1-203ENST00000448693 HSPA2P54652 639 aa15.79■□□□□ 0.12
SPCS1-203ENST00000448693 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
SPCS1-203ENST00000448693 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
SPCS1-203ENST00000448693 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
SPCS1-203ENST00000448693 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
SPCS1-203ENST00000448693 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
SPCS1-203ENST00000448693 MYOM3Q5VTT5 1437 aa15.75■□□□□ 0.11
SPCS1-203ENST00000448693 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
SPCS1-203ENST00000448693 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
SPCS1-203ENST00000448693 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
SPCS1-203ENST00000448693 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
SPCS1-203ENST00000448693 CEP152O94986 1710 aa15.72■□□□□ 0.11
SPCS1-203ENST00000448693 RTEL1-TNFRSF6BF6WH68 1400 aa15.72■□□□□ 0.11
SPCS1-203ENST00000448693 RNF17Q9BXT8 1623 aaKnown RBP15.72■□□□□ 0.11
SPCS1-203ENST00000448693 DNMT1P26358 1616 aaKnown RBP15.69■□□□□ 0.1
SPCS1-203ENST00000448693 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
SPCS1-203ENST00000448693 EIF2AK4Q9P2K8 1649 aaKnown RBP15.69■□□□□ 0.1
SPCS1-203ENST00000448693 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
SPCS1-203ENST00000448693 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
SPCS1-203ENST00000448693 ILDR1Q86SU0 546 aaPredicted RBP15.68■□□□□ 0.1
SPCS1-203ENST00000448693 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
SPCS1-203ENST00000448693 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
SPCS1-203ENST00000448693 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
SPCS1-203ENST00000448693 PROM2Q8N271 834 aa15.66■□□□□ 0.1
SPCS1-203ENST00000448693 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
SPCS1-203ENST00000448693 DHX29Q7Z478 1369 aaKnown RBP15.65■□□□□ 0.1
SPCS1-203ENST00000448693 GGT6Q6P531 493 aa15.65■□□□□ 0.1
SPCS1-203ENST00000448693 NPATQ14207 1427 aa15.65■□□□□ 0.1
SPCS1-203ENST00000448693 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
SPCS1-203ENST00000448693 ZMYM3Q14202 1370 aa15.64■□□□□ 0.09
SPCS1-203ENST00000448693 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
SPCS1-203ENST00000448693 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
SPCS1-203ENST00000448693 POLR1AO95602 1720 aaPredicted RBP15.63■□□□□ 0.09
SPCS1-203ENST00000448693 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
SPCS1-203ENST00000448693 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
SPCS1-203ENST00000448693 ABCC3O15438 1527 aa15.61■□□□□ 0.09
SPCS1-203ENST00000448693 DEPDC5O75140 1603 aa15.61■□□□□ 0.09
SPCS1-203ENST00000448693 CFAP65Q6ZU64 1925 aaKnown RBP15.6■□□□□ 0.09
SPCS1-203ENST00000448693 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
SPCS1-203ENST00000448693 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
SPCS1-203ENST00000448693 ABCC5O15440 1437 aa15.6■□□□□ 0.09
SPCS1-203ENST00000448693 DAPK1P53355 1430 aa15.6■□□□□ 0.09
SPCS1-203ENST00000448693 PZPP20742 1482 aa15.59■□□□□ 0.09
SPCS1-203ENST00000448693 PRDM15P57071 1507 aaPredicted RBP15.59■□□□□ 0.09
SPCS1-203ENST00000448693 KIF3BO15066 747 aa15.59■□□□□ 0.09
SPCS1-203ENST00000448693 KIF15Q9NS87 1388 aa15.55■□□□□ 0.08
SPCS1-203ENST00000448693 TSPY4P0CV99 314 aa15.55■□□□□ 0.08
SPCS1-203ENST00000448693 TSPY10P0CW01 314 aa15.55■□□□□ 0.08
SPCS1-203ENST00000448693 SPATA31D1Q6ZQQ2 1576 aa15.54■□□□□ 0.08
SPCS1-203ENST00000448693 NEURL4Q96JN8 1562 aa15.54■□□□□ 0.08
SPCS1-203ENST00000448693 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
SPCS1-203ENST00000448693 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
SPCS1-203ENST00000448693 PLA2R1Q13018 1463 aa15.52■□□□□ 0.08
SPCS1-203ENST00000448693 LTBP4Q8N2S1 1624 aa15.52■□□□□ 0.08
SPCS1-203ENST00000448693 PTPRTO14522 1441 aa15.51■□□□□ 0.07
SPCS1-203ENST00000448693 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
SPCS1-203ENST00000448693 TNRQ92752 1358 aa15.51■□□□□ 0.07
SPCS1-203ENST00000448693 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
SPCS1-203ENST00000448693 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
SPCS1-203ENST00000448693 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
SPCS1-203ENST00000448693 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
SPCS1-203ENST00000448693 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
SPCS1-203ENST00000448693 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
SPCS1-203ENST00000448693 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
SPCS1-203ENST00000448693 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
SPCS1-203ENST00000448693 NCKAP5LQ9HCH0 1330 aa15.47■□□□□ 0.07
SPCS1-203ENST00000448693 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
SPCS1-203ENST00000448693 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
SPCS1-203ENST00000448693 PIK3C2BO00750 1634 aa15.46■□□□□ 0.07
SPCS1-203ENST00000448693 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
SPCS1-203ENST00000448693 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
SPCS1-203ENST00000448693 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
SPCS1-203ENST00000448693 NLRP1Q9C000 1473 aa15.46■□□□□ 0.06
SPCS1-203ENST00000448693 IQGAP1P46940 1657 aa15.45■□□□□ 0.06
SPCS1-203ENST00000448693 EFCAB6Q5THR3 1501 aa15.45■□□□□ 0.06
SPCS1-203ENST00000448693 UNC13BO14795 1591 aa15.45■□□□□ 0.06
SPCS1-203ENST00000448693 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
SPCS1-203ENST00000448693 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
SPCS1-203ENST00000448693 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
SPCS1-203ENST00000448693 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
SPCS1-203ENST00000448693 SYNMO15061 1565 aa15.44■□□□□ 0.06
SPCS1-203ENST00000448693 MYO5BQ9ULV0 1848 aa15.43■□□□□ 0.06
SPCS1-203ENST00000448693 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
SPCS1-203ENST00000448693 AMER1Q5JTC6 1135 aaPredicted RBP15.43■□□□□ 0.06
SPCS1-203ENST00000448693 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
SPCS1-203ENST00000448693 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms