RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.62
LMNA-208ENST00000448611 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
LMNA-208ENST00000448611 ZNF518AQ6AHZ1 1483 aa25.12■■□□□ 1.61
LMNA-208ENST00000448611 DEPDC5O75140 1603 aa25.09■■□□□ 1.61
LMNA-208ENST00000448611 PLA2R1Q13018 1463 aa25.09■■□□□ 1.61
LMNA-208ENST00000448611 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.61
LMNA-208ENST00000448611 NEO1Q92859 1461 aa25.08■■□□□ 1.6
LMNA-208ENST00000448611 POGZQ7Z3K3 1410 aa25.07■■□□□ 1.6
LMNA-208ENST00000448611 KDM5CP41229 1560 aa25.07■■□□□ 1.6
LMNA-208ENST00000448611 DHX29Q7Z478 1369 aaKnown RBP25.06■■□□□ 1.6
LMNA-208ENST00000448611 HSPA5P11021 654 aaKnown RBP25.06■■□□□ 1.6
LMNA-208ENST00000448611 EIF2AK4Q9P2K8 1649 aaKnown RBP25.05■■□□□ 1.6
LMNA-208ENST00000448611 EIF4G2P78344 907 aaKnown RBP eCLIP25.04■■□□□ 1.6
LMNA-208ENST00000448611 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
LMNA-208ENST00000448611 ATP10AO60312 1499 aa25.04■■□□□ 1.6
LMNA-208ENST00000448611 CCDC144AA2RUR9 1427 aa25.04■■□□□ 1.6
LMNA-208ENST00000448611 UHRF1BP1Q6BDS2 1440 aa25.03■■□□□ 1.6
LMNA-208ENST00000448611 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
LMNA-208ENST00000448611 MLH3Q9UHC1 1453 aa25.01■■□□□ 1.59
LMNA-208ENST00000448611 VWDEQ8N2E2 1590 aa25.01■■□□□ 1.59
LMNA-208ENST00000448611 PRDM15P57071 1507 aaPredicted RBP24.97■■□□□ 1.59
LMNA-208ENST00000448611 SPATA31E1Q6ZUB1 1445 aa24.97■■□□□ 1.59
LMNA-208ENST00000448611 E9PCH4 1651 aa24.97■■□□□ 1.59
LMNA-208ENST00000448611 MROH1Q8NDA8 1641 aa24.97■■□□□ 1.59
LMNA-208ENST00000448611 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
LMNA-208ENST00000448611 KIF3BO15066 747 aa24.96■■□□□ 1.59
LMNA-208ENST00000448611 TET3O43151 1660 aa24.95■■□□□ 1.58
LMNA-208ENST00000448611 A2MP01023 1474 aa24.95■■□□□ 1.58
LMNA-208ENST00000448611 RAPGEF3O95398 923 aa24.95■■□□□ 1.58
LMNA-208ENST00000448611 KANK1Q14678 1352 aa24.94■■□□□ 1.58
LMNA-208ENST00000448611 RALGAPBQ86X10 1494 aa24.93■■□□□ 1.58
LMNA-208ENST00000448611 ZNF326Q5BKZ1 582 aaKnown RBP24.92■■□□□ 1.58
LMNA-208ENST00000448611 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
LMNA-208ENST00000448611 FRMPD1Q5SYB0 1578 aa24.92■■□□□ 1.58
LMNA-208ENST00000448611 WASHC2AQ641Q2 1341 aa24.91■■□□□ 1.58
LMNA-208ENST00000448611 PTPRTO14522 1441 aa24.9■■□□□ 1.58
LMNA-208ENST00000448611 COL17A1Q9UMD9 1497 aaPredicted RBP24.9■■□□□ 1.58
LMNA-208ENST00000448611 ABCA6Q8N139 1617 aa24.89■■□□□ 1.58
LMNA-208ENST00000448611 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.58
LMNA-208ENST00000448611 TRPM2O94759 1503 aa24.89■■□□□ 1.58
LMNA-208ENST00000448611 KDM2AQ9Y2K7 1162 aa24.88■■□□□ 1.57
LMNA-208ENST00000448611 RICTORQ6R327 1708 aa24.87■■□□□ 1.57
LMNA-208ENST00000448611 SPHKAPQ2M3C7 1700 aa24.86■■□□□ 1.57
LMNA-208ENST00000448611 CENPBP07199 599 aaPredicted RBP24.86■■□□□ 1.57
LMNA-208ENST00000448611 BCORL1Q5H9F3 1711 aa24.85■■□□□ 1.57
LMNA-208ENST00000448611 YTHDC1Q96MU7 727 aaKnown RBP24.85■■□□□ 1.57
LMNA-208ENST00000448611 LMTK2Q8IWU2 1503 aa24.85■■□□□ 1.57
LMNA-208ENST00000448611 USP47Q96K76 1375 aa24.84■■□□□ 1.57
LMNA-208ENST00000448611 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
LMNA-208ENST00000448611 C11orf95C9JLR9 678 aaPredicted RBP24.84■■□□□ 1.57
LMNA-208ENST00000448611 RGL3Q3MIN7 710 aa24.83■■□□□ 1.57
LMNA-208ENST00000448611 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.56
LMNA-208ENST00000448611 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
LMNA-208ENST00000448611 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
LMNA-208ENST00000448611 POLR1AO95602 1720 aaPredicted RBP24.8■■□□□ 1.56
LMNA-208ENST00000448611 CLTCL1P53675 1640 aa24.79■■□□□ 1.56
LMNA-208ENST00000448611 TRPM1Q7Z4N2 1603 aa24.79■■□□□ 1.56
LMNA-208ENST00000448611 CEP152O94986 1710 aa24.78■■□□□ 1.56
LMNA-208ENST00000448611 CARD11Q9BXL7 1154 aa24.78■■□□□ 1.56
LMNA-208ENST00000448611 KIF7Q2M1P5 1343 aa24.75■■□□□ 1.55
LMNA-208ENST00000448611 ANP32CO43423 234 aa24.75■■□□□ 1.55
LMNA-208ENST00000448611 ZMYM4Q5VZL5 1548 aa24.74■■□□□ 1.55
LMNA-208ENST00000448611 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
LMNA-208ENST00000448611 CNTLNQ9NXG0 1405 aa24.74■■□□□ 1.55
LMNA-208ENST00000448611 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
LMNA-208ENST00000448611 NEURL4Q96JN8 1562 aa24.72■■□□□ 1.55
LMNA-208ENST00000448611 GPRASP1Q5JY77 1395 aa24.72■■□□□ 1.55
LMNA-208ENST00000448611 GGT6Q6P531 493 aa24.71■■□□□ 1.55
LMNA-208ENST00000448611 ABCC3O15438 1527 aa24.7■■□□□ 1.54
LMNA-208ENST00000448611 LAMC1P11047 1609 aa24.7■■□□□ 1.54
LMNA-208ENST00000448611 CCER2I3L3R5 266 aa24.69■■□□□ 1.54
LMNA-208ENST00000448611 NPATQ14207 1427 aa24.68■■□□□ 1.54
LMNA-208ENST00000448611 UGGT1Q9NYU2 1555 aa24.67■■□□□ 1.54
LMNA-208ENST00000448611 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
LMNA-208ENST00000448611 ARID4BQ4LE39 1312 aaPredicted RBP24.67■■□□□ 1.54
LMNA-208ENST00000448611 MADDQ8WXG6 1647 aa24.66■■□□□ 1.54
LMNA-208ENST00000448611 STAC3Q96MF2 364 aa24.66■■□□□ 1.54
LMNA-208ENST00000448611 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
LMNA-208ENST00000448611 WASHC2CQ9Y4E1 1318 aa24.64■■□□□ 1.53
LMNA-208ENST00000448611 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
LMNA-208ENST00000448611 ARHGEF40Q8TER5 1519 aa24.61■■□□□ 1.53
LMNA-208ENST00000448611 KIF1BO60333 1816 aa24.6■■□□□ 1.53
LMNA-208ENST00000448611 ZC3H13Q5T200 1668 aaKnown RBP24.59■■□□□ 1.53
LMNA-208ENST00000448611 ARHGAP31Q2M1Z3 1444 aa24.57■■□□□ 1.52
LMNA-208ENST00000448611 MROH2AA6NES4 1674 aa24.57■■□□□ 1.52
LMNA-208ENST00000448611 REREQ9P2R6 1566 aa24.57■■□□□ 1.52
LMNA-208ENST00000448611 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
LMNA-208ENST00000448611 SCAF1Q9H7N4 1312 aaKnown RBP24.56■■□□□ 1.52
LMNA-208ENST00000448611 NOS1P29475 1434 aa24.56■■□□□ 1.52
LMNA-208ENST00000448611 MYOM2P54296 1465 aa24.56■■□□□ 1.52
LMNA-208ENST00000448611 SIGLEC1Q9BZZ2 1709 aa24.54■■□□□ 1.52
LMNA-208ENST00000448611 IFT172Q9UG01 1749 aa24.54■■□□□ 1.52
LMNA-208ENST00000448611 AGLP35573 1532 aa24.51■■□□□ 1.51
LMNA-208ENST00000448611 KIAA1210Q9ULL0 1709 aa24.51■■□□□ 1.51
LMNA-208ENST00000448611 CFAP65Q6ZU64 1925 aaKnown RBP24.5■■□□□ 1.51
LMNA-208ENST00000448611 SYNMO15061 1565 aa24.49■■□□□ 1.51
LMNA-208ENST00000448611 PIK3C2BO00750 1634 aa24.49■■□□□ 1.51
LMNA-208ENST00000448611 IQGAP1P46940 1657 aa24.49■■□□□ 1.51
LMNA-208ENST00000448611 NRXN1Q9ULB1 1477 aa24.49■■□□□ 1.51
LMNA-208ENST00000448611 TESK2Q96S53 571 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms