RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
PBX3-207ENST00000447726 RALBP1Q15311 655 aa21.99■■□□□ 1.11
PBX3-207ENST00000447726 PTPRGP23470 1445 aa21.99■■□□□ 1.11
PBX3-207ENST00000447726 PAK3O75914 559 aaPredicted RBP21.99■■□□□ 1.11
PBX3-207ENST00000447726 ABCA8O94911 1581 aa21.99■■□□□ 1.11
PBX3-207ENST00000447726 NOP58Q9Y2X3 529 aaKnown RBP21.99■■□□□ 1.11
PBX3-207ENST00000447726 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
PBX3-207ENST00000447726 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
PBX3-207ENST00000447726 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
PBX3-207ENST00000447726 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
PBX3-207ENST00000447726 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
PBX3-207ENST00000447726 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
PBX3-207ENST00000447726 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
PBX3-207ENST00000447726 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
PBX3-207ENST00000447726 EXOC6Q8TAG9 804 aa21.9■■□□□ 1.1
PBX3-207ENST00000447726 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
PBX3-207ENST00000447726 E9PCH4 1651 aa21.89■■□□□ 1.09
PBX3-207ENST00000447726 ARHGEF5Q12774 1597 aa21.89■■□□□ 1.09
PBX3-207ENST00000447726 PER1O15534 1290 aaPredicted RBP21.88■■□□□ 1.09
PBX3-207ENST00000447726 NBR1Q14596 966 aa21.88■■□□□ 1.09
PBX3-207ENST00000447726 RCAN3Q9UKA8 241 aa21.88■■□□□ 1.09
PBX3-207ENST00000447726 PARD3Q8TEW0 1356 aa21.88■■□□□ 1.09
PBX3-207ENST00000447726 CCDC144AA2RUR9 1427 aa21.88■■□□□ 1.09
PBX3-207ENST00000447726 CCDC141Q6ZP82 1450 aa21.87■■□□□ 1.09
PBX3-207ENST00000447726 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
PBX3-207ENST00000447726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.09
PBX3-207ENST00000447726 IPO9Q96P70 1041 aaKnown RBP21.86■■□□□ 1.09
PBX3-207ENST00000447726 SAMD9LQ8IVG5 1584 aa21.86■■□□□ 1.09
PBX3-207ENST00000447726 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
PBX3-207ENST00000447726 PLA2R1Q13018 1463 aa21.84■■□□□ 1.09
PBX3-207ENST00000447726 DEKP35659 375 aaKnown RBP21.84■■□□□ 1.09
PBX3-207ENST00000447726 CC2D1BQ5T0F9 858 aaKnown RBP21.84■■□□□ 1.09
PBX3-207ENST00000447726 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
PBX3-207ENST00000447726 TRPM1Q7Z4N2 1603 aa21.83■■□□□ 1.08
PBX3-207ENST00000447726 TESK2Q96S53 571 aa21.82■■□□□ 1.08
PBX3-207ENST00000447726 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
PBX3-207ENST00000447726 RSPH4AQ5TD94 716 aa21.81■■□□□ 1.08
PBX3-207ENST00000447726 A2MP01023 1474 aa21.8■■□□□ 1.08
PBX3-207ENST00000447726 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
PBX3-207ENST00000447726 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
PBX3-207ENST00000447726 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
PBX3-207ENST00000447726 PANK3Q9H999 370 aa21.78■■□□□ 1.08
PBX3-207ENST00000447726 ZBTB47Q9UFB7 747 aaPredicted RBP21.78■■□□□ 1.08
PBX3-207ENST00000447726 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
PBX3-207ENST00000447726 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
PBX3-207ENST00000447726 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
PBX3-207ENST00000447726 PLIN1O60240 522 aa21.76■■□□□ 1.07
PBX3-207ENST00000447726 NPM2Q86SE8 214 aaKnown RBP21.74■■□□□ 1.07
PBX3-207ENST00000447726 PLEKHH2Q8IVE3 1493 aa21.74■■□□□ 1.07
PBX3-207ENST00000447726 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
PBX3-207ENST00000447726 ERBINQ96RT1 1412 aa21.72■■□□□ 1.07
PBX3-207ENST00000447726 WASHC2CQ9Y4E1 1318 aa21.72■■□□□ 1.07
PBX3-207ENST00000447726 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
PBX3-207ENST00000447726 ARHGAP5Q13017 1502 aa21.72■■□□□ 1.07
PBX3-207ENST00000447726 PDE4AP27815 886 aa21.7■■□□□ 1.07
PBX3-207ENST00000447726 TMF1P82094 1093 aa21.7■■□□□ 1.06
PBX3-207ENST00000447726 UNC13BO14795 1591 aa21.7■■□□□ 1.06
PBX3-207ENST00000447726 TTC37Q6PGP7 1564 aa21.69■■□□□ 1.06
PBX3-207ENST00000447726 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
PBX3-207ENST00000447726 SKAP1Q86WV1 359 aa21.67■■□□□ 1.06
PBX3-207ENST00000447726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
PBX3-207ENST00000447726 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
PBX3-207ENST00000447726 BACH2Q9BYV9 841 aa21.66■■□□□ 1.06
PBX3-207ENST00000447726 MAST1Q9Y2H9 1570 aa21.65■■□□□ 1.06
PBX3-207ENST00000447726 ADAMTS8Q9UP79 889 aa21.65■■□□□ 1.06
PBX3-207ENST00000447726 LAMC1P11047 1609 aa21.64■■□□□ 1.06
PBX3-207ENST00000447726 IQGAP3Q86VI3 1631 aa21.63■■□□□ 1.05
PBX3-207ENST00000447726 MYO5CQ9NQX4 1742 aa21.62■■□□□ 1.05
PBX3-207ENST00000447726 INSRP06213 1382 aa21.62■■□□□ 1.05
PBX3-207ENST00000447726 MS4A1P11836 297 aa21.62■■□□□ 1.05
PBX3-207ENST00000447726 C20orf194Q5TEA3 1177 aa21.61■■□□□ 1.05
PBX3-207ENST00000447726 RTL5Q5HYW3 569 aaPredicted RBP21.61■■□□□ 1.05
PBX3-207ENST00000447726 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
PBX3-207ENST00000447726 ATP10AO60312 1499 aa21.6■■□□□ 1.05
PBX3-207ENST00000447726 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
PBX3-207ENST00000447726 PLXNC1O60486 1568 aa21.59■■□□□ 1.05
PBX3-207ENST00000447726 ZMYM4Q5VZL5 1548 aa21.58■■□□□ 1.05
PBX3-207ENST00000447726 DUOX2Q9NRD8 1548 aa21.58■■□□□ 1.04
PBX3-207ENST00000447726 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
PBX3-207ENST00000447726 WDR7Q9Y4E6 1490 aa21.57■■□□□ 1.04
PBX3-207ENST00000447726 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
PBX3-207ENST00000447726 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
PBX3-207ENST00000447726 LAS1LQ9Y4W2 734 aaKnown RBP21.55■■□□□ 1.04
PBX3-207ENST00000447726 AMER1Q5JTC6 1135 aaPredicted RBP21.54■■□□□ 1.04
PBX3-207ENST00000447726 WDR43Q15061 677 aaKnown RBP eCLIP21.53■■□□□ 1.04
PBX3-207ENST00000447726 DUSP27Q5VZP5 1158 aa21.53■■□□□ 1.04
PBX3-207ENST00000447726 RNF17Q9BXT8 1623 aaKnown RBP21.52■■□□□ 1.04
PBX3-207ENST00000447726 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
PBX3-207ENST00000447726 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
PBX3-207ENST00000447726 EFCAB2Q5VUJ9 269 aa21.5■■□□□ 1.03
PBX3-207ENST00000447726 PLCH2O75038 1416 aa21.49■■□□□ 1.03
PBX3-207ENST00000447726 ABCC2Q92887 1545 aa21.49■■□□□ 1.03
PBX3-207ENST00000447726 KDM2BQ8NHM5 1336 aa21.48■■□□□ 1.03
PBX3-207ENST00000447726 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
PBX3-207ENST00000447726 GOLGA2Q08379 1002 aa21.47■■□□□ 1.03
PBX3-207ENST00000447726 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
PBX3-207ENST00000447726 NEFMP07197 916 aa21.46■■□□□ 1.03
PBX3-207ENST00000447726 CHD1O14646 1710 aa21.46■■□□□ 1.03
PBX3-207ENST00000447726 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
PBX3-207ENST00000447726 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms