RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
BRF1-206ENST00000446501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.132e-7■■■■■ 33.4
BRF1-206ENST00000446501 ARHGEF5Q12774 1597 aa22.1■■□□□ 1.13
BRF1-206ENST00000446501 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
BRF1-206ENST00000446501 DHX29Q7Z478 1369 aaKnown RBP22.08■■□□□ 1.12
BRF1-206ENST00000446501 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
BRF1-206ENST00000446501 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
BRF1-206ENST00000446501 PLEKHH2Q8IVE3 1493 aa22.06■■□□□ 1.12
BRF1-206ENST00000446501 ABCC2Q92887 1545 aa22.05■■□□□ 1.12
BRF1-206ENST00000446501 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
BRF1-206ENST00000446501 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
BRF1-206ENST00000446501 KDM5DQ9BY66 1539 aa22.05■■□□□ 1.12
BRF1-206ENST00000446501 KDM5CP41229 1560 aa22.04■■□□□ 1.12
BRF1-206ENST00000446501 UHRF1BP1Q6BDS2 1440 aa22.04■■□□□ 1.12
BRF1-206ENST00000446501 ARHGEF12Q9NZN5 1544 aa22.04■■□□□ 1.12
BRF1-206ENST00000446501 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
BRF1-206ENST00000446501 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
BRF1-206ENST00000446501 CCDC144AA2RUR9 1427 aa22.02■■□□□ 1.12
BRF1-206ENST00000446501 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
BRF1-206ENST00000446501 PLA2R1Q13018 1463 aa22■■□□□ 1.11
BRF1-206ENST00000446501 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
BRF1-206ENST00000446501 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
BRF1-206ENST00000446501 EFCAB2Q5VUJ9 269 aa21.98■■□□□ 1.11
BRF1-206ENST00000446501 SALL2Q9Y467 1007 aaPredicted RBP21.97■■□□□ 1.11
BRF1-206ENST00000446501 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
BRF1-206ENST00000446501 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
BRF1-206ENST00000446501 POLR1AO95602 1720 aaPredicted RBP21.96■■□□□ 1.11
BRF1-206ENST00000446501 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.11
BRF1-206ENST00000446501 PLCH2O75038 1416 aa21.94■■□□□ 1.1
BRF1-206ENST00000446501 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
BRF1-206ENST00000446501 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
BRF1-206ENST00000446501 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
BRF1-206ENST00000446501 PRAG1Q86YV5 1406 aa21.92■■□□□ 1.1
BRF1-206ENST00000446501 ZCCHC11Q5TAX3 1644 aaKnown RBP21.91■■□□□ 1.1
BRF1-206ENST00000446501 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
BRF1-206ENST00000446501 ARID4BQ4LE39 1312 aaPredicted RBP21.9■■□□□ 1.1
BRF1-206ENST00000446501 IL27Q8NEV9 243 aa21.9■■□□□ 1.1
BRF1-206ENST00000446501 A2MP01023 1474 aa21.89■■□□□ 1.1
BRF1-206ENST00000446501 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.09
BRF1-206ENST00000446501 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
BRF1-206ENST00000446501 SPAG9O60271 1321 aaKnown RBP21.87■■□□□ 1.09
BRF1-206ENST00000446501 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
BRF1-206ENST00000446501 PNISRQ8TF01 805 aaKnown RBP21.86■■□□□ 1.09
BRF1-206ENST00000446501 IPO9Q96P70 1041 aaKnown RBP21.86■■□□□ 1.09
BRF1-206ENST00000446501 UNC13BO14795 1591 aa21.86■■□□□ 1.09
BRF1-206ENST00000446501 DUOX2Q9NRD8 1548 aa21.84■■□□□ 1.09
BRF1-206ENST00000446501 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
BRF1-206ENST00000446501 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
BRF1-206ENST00000446501 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
BRF1-206ENST00000446501 ABCC1P33527 1531 aa21.81■■□□□ 1.08
BRF1-206ENST00000446501 CC2D1BQ5T0F9 858 aaKnown RBP21.8■■□□□ 1.08
BRF1-206ENST00000446501 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
BRF1-206ENST00000446501 TESK2Q96S53 571 aa21.8■■□□□ 1.08
BRF1-206ENST00000446501 UHRF1BP1LA0JNW5 1464 aa21.79■■□□□ 1.08
BRF1-206ENST00000446501 IQGAP3Q86VI3 1631 aa21.79■■□□□ 1.08
BRF1-206ENST00000446501 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
BRF1-206ENST00000446501 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
BRF1-206ENST00000446501 MYBBP1AQ9BQG0 1328 aaKnown RBP21.77■■□□□ 1.08
BRF1-206ENST00000446501 KIF3BO15066 747 aa21.76■■□□□ 1.07
BRF1-206ENST00000446501 PANK3Q9H999 370 aa21.75■■□□□ 1.07
BRF1-206ENST00000446501 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
BRF1-206ENST00000446501 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
BRF1-206ENST00000446501 RALBP1Q15311 655 aa21.74■■□□□ 1.07
BRF1-206ENST00000446501 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
BRF1-206ENST00000446501 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
BRF1-206ENST00000446501 NUDCQ9Y266 331 aa21.73■■□□□ 1.07
BRF1-206ENST00000446501 SCAPERQ9BY12 1400 aa21.73■■□□□ 1.07
BRF1-206ENST00000446501 FANCAO15360 1455 aa21.71■■□□□ 1.07
BRF1-206ENST00000446501 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
BRF1-206ENST00000446501 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
BRF1-206ENST00000446501 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
BRF1-206ENST00000446501 BRD4O60885 1362 aaPredicted RBP21.69■■□□□ 1.06
BRF1-206ENST00000446501 ZFYVE16Q7Z3T8 1539 aa21.69■■□□□ 1.06
BRF1-206ENST00000446501 TMF1P82094 1093 aa21.69■■□□□ 1.06
BRF1-206ENST00000446501 ATP10AO60312 1499 aa21.69■■□□□ 1.06
BRF1-206ENST00000446501 NLRP13Q86W25 1043 aa21.67■■□□□ 1.06
BRF1-206ENST00000446501 COL17A1Q9UMD9 1497 aaPredicted RBP21.67■■□□□ 1.06
BRF1-206ENST00000446501 NEFMP07197 916 aa21.67■■□□□ 1.06
BRF1-206ENST00000446501 PRDM15P57071 1507 aaPredicted RBP21.66■■□□□ 1.06
BRF1-206ENST00000446501 LRPPRCP42704 1394 aaKnown RBP21.66■■□□□ 1.06
BRF1-206ENST00000446501 PARD3Q8TEW0 1356 aa21.65■■□□□ 1.06
BRF1-206ENST00000446501 E9PCH4 1651 aa21.65■■□□□ 1.06
BRF1-206ENST00000446501 ADGRL1O94910 1474 aa21.64■■□□□ 1.05
BRF1-206ENST00000446501 RTEL1-TNFRSF6BF6WH68 1400 aa21.64■■□□□ 1.05
BRF1-206ENST00000446501 ASXL2Q76L83 1435 aa21.64■■□□□ 1.05
BRF1-206ENST00000446501 ATP7AQ04656 1500 aa21.61■■□□□ 1.05
BRF1-206ENST00000446501 UGGT1Q9NYU2 1555 aa21.59■■□□□ 1.05
BRF1-206ENST00000446501 KANK1Q14678 1352 aa21.59■■□□□ 1.05
BRF1-206ENST00000446501 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
BRF1-206ENST00000446501 CFAP70Q5T0N1 1121 aa21.58■■□□□ 1.05
BRF1-206ENST00000446501 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
BRF1-206ENST00000446501 CLTCL1P53675 1640 aa21.57■■□□□ 1.04
BRF1-206ENST00000446501 CHGAP10645 457 aaKnown RBP21.57■■□□□ 1.04
BRF1-206ENST00000446501 PTPRTO14522 1441 aa21.56■■□□□ 1.04
BRF1-206ENST00000446501 TRPM2O94759 1503 aa21.56■■□□□ 1.04
BRF1-206ENST00000446501 ADGRF5Q8IZF2 1346 aa21.55■■□□□ 1.04
BRF1-206ENST00000446501 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
BRF1-206ENST00000446501 NPM1P06748 294 aaKnown RBP eCLIP21.55■■□□□ 1.04
BRF1-206ENST00000446501 ABCA9Q8IUA7 1624 aa21.54■■□□□ 1.04
BRF1-206ENST00000446501 RNF123Q5XPI4 1314 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms