RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
DDR1-238ENST00000446312 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
DDR1-238ENST00000446312 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
DDR1-238ENST00000446312 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
DDR1-238ENST00000446312 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
DDR1-238ENST00000446312 GCC2Q8IWJ2 1684 aa16.52■□□□□ 0.24
DDR1-238ENST00000446312 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.23
DDR1-238ENST00000446312 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.23
DDR1-238ENST00000446312 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
DDR1-238ENST00000446312 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
DDR1-238ENST00000446312 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
DDR1-238ENST00000446312 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
DDR1-238ENST00000446312 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
DDR1-238ENST00000446312 BCORL1Q5H9F3 1711 aa16.49■□□□□ 0.23
DDR1-238ENST00000446312 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
DDR1-238ENST00000446312 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
DDR1-238ENST00000446312 PZPP20742 1482 aa16.48■□□□□ 0.23
DDR1-238ENST00000446312 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
DDR1-238ENST00000446312 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
DDR1-238ENST00000446312 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
DDR1-238ENST00000446312 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
DDR1-238ENST00000446312 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
DDR1-238ENST00000446312 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
DDR1-238ENST00000446312 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
DDR1-238ENST00000446312 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
DDR1-238ENST00000446312 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
DDR1-238ENST00000446312 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDR1-238ENST00000446312 RALBP1Q15311 655 aa16.45■□□□□ 0.22
DDR1-238ENST00000446312 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
DDR1-238ENST00000446312 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
DDR1-238ENST00000446312 BCL2L13Q9BXK5 485 aa16.42■□□□□ 0.22
DDR1-238ENST00000446312 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
DDR1-238ENST00000446312 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
DDR1-238ENST00000446312 A0A0U1RQG5 324 aaPredicted RBP16.41■□□□□ 0.22
DDR1-238ENST00000446312 BCAR3O75815 825 aa16.41■□□□□ 0.22
DDR1-238ENST00000446312 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
DDR1-238ENST00000446312 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
DDR1-238ENST00000446312 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
DDR1-238ENST00000446312 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
DDR1-238ENST00000446312 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
DDR1-238ENST00000446312 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
DDR1-238ENST00000446312 KNSTRNQ9Y448 316 aa16.4■□□□□ 0.22
DDR1-238ENST00000446312 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
DDR1-238ENST00000446312 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
DDR1-238ENST00000446312 FRAT2O75474 233 aaPredicted RBP16.39■□□□□ 0.21
DDR1-238ENST00000446312 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
DDR1-238ENST00000446312 KIF14Q15058 1648 aa16.38■□□□□ 0.21
DDR1-238ENST00000446312 APAF1O14727 1248 aa16.38■□□□□ 0.21
DDR1-238ENST00000446312 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
DDR1-238ENST00000446312 ROCK1Q13464 1354 aa16.37■□□□□ 0.21
DDR1-238ENST00000446312 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
DDR1-238ENST00000446312 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
DDR1-238ENST00000446312 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
DDR1-238ENST00000446312 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
DDR1-238ENST00000446312 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
DDR1-238ENST00000446312 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
DDR1-238ENST00000446312 TMF1P82094 1093 aa16.34■□□□□ 0.21
DDR1-238ENST00000446312 NUP160Q12769 1436 aa16.34■□□□□ 0.21
DDR1-238ENST00000446312 C9orf84Q5VXU9 1444 aa16.33■□□□□ 0.21
DDR1-238ENST00000446312 PANK1Q8TE04 598 aa16.33■□□□□ 0.21
DDR1-238ENST00000446312 NUTM2DQ5VT03 806 aaPredicted RBP16.33■□□□□ 0.2
DDR1-238ENST00000446312 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
DDR1-238ENST00000446312 TNNQ9UQP3 1299 aa16.32■□□□□ 0.2
DDR1-238ENST00000446312 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
DDR1-238ENST00000446312 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
DDR1-238ENST00000446312 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
DDR1-238ENST00000446312 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
DDR1-238ENST00000446312 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
DDR1-238ENST00000446312 TESK2Q96S53 571 aa16.3■□□□□ 0.2
DDR1-238ENST00000446312 SEC24BO95487 1268 aa16.29■□□□□ 0.2
DDR1-238ENST00000446312 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
DDR1-238ENST00000446312 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDR1-238ENST00000446312 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
DDR1-238ENST00000446312 GSE1Q14687 1217 aa16.28■□□□□ 0.2
DDR1-238ENST00000446312 IGHDP01880 384 aa16.27■□□□□ 0.19
DDR1-238ENST00000446312 CARMIL2Q6F5E8 1435 aa16.27■□□□□ 0.19
DDR1-238ENST00000446312 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.19
DDR1-238ENST00000446312 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
DDR1-238ENST00000446312 ATP10BO94823 1461 aa16.26■□□□□ 0.19
DDR1-238ENST00000446312 ITSN2Q9NZM3 1697 aa16.25■□□□□ 0.19
DDR1-238ENST00000446312 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
DDR1-238ENST00000446312 ABCA8O94911 1581 aa16.25■□□□□ 0.19
DDR1-238ENST00000446312 KDM5CP41229 1560 aa16.25■□□□□ 0.19
DDR1-238ENST00000446312 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
DDR1-238ENST00000446312 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
DDR1-238ENST00000446312 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 MS4A1P11836 297 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
DDR1-238ENST00000446312 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
DDR1-238ENST00000446312 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
DDR1-238ENST00000446312 POGKQ9P215 609 aa16.22■□□□□ 0.19
DDR1-238ENST00000446312 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
DDR1-238ENST00000446312 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
DDR1-238ENST00000446312 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
DDR1-238ENST00000446312 CFAP70Q5T0N1 1121 aa16.21■□□□□ 0.19
DDR1-238ENST00000446312 ADGRL2O95490 1459 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms