RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GGT6Q6P531 493 aa16.5■□□□□ 0.23
HDAC6-211ENST00000443563 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
HDAC6-211ENST00000443563 CLTCQ00610 1675 aaKnown RBP16.48■□□□□ 0.23
HDAC6-211ENST00000443563 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
HDAC6-211ENST00000443563 C3P01024 1663 aa16.46■□□□□ 0.23
HDAC6-211ENST00000443563 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
HDAC6-211ENST00000443563 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
HDAC6-211ENST00000443563 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
HDAC6-211ENST00000443563 ITGAEP38570 1179 aa16.45■□□□□ 0.22
HDAC6-211ENST00000443563 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
HDAC6-211ENST00000443563 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
HDAC6-211ENST00000443563 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
HDAC6-211ENST00000443563 ZMYM3Q14202 1370 aa16.41■□□□□ 0.22
HDAC6-211ENST00000443563 PRDM15P57071 1507 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-211ENST00000443563 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
HDAC6-211ENST00000443563 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
HDAC6-211ENST00000443563 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
HDAC6-211ENST00000443563 KANK1Q14678 1352 aa16.4■□□□□ 0.22
HDAC6-211ENST00000443563 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
HDAC6-211ENST00000443563 CEBPAP49715 358 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-211ENST00000443563 NPATQ14207 1427 aa16.38■□□□□ 0.21
HDAC6-211ENST00000443563 CEP152O94986 1710 aa16.38■□□□□ 0.21
HDAC6-211ENST00000443563 ABCC3O15438 1527 aa16.38■□□□□ 0.21
HDAC6-211ENST00000443563 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
HDAC6-211ENST00000443563 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
HDAC6-211ENST00000443563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■■□□□ 14.1
HDAC6-211ENST00000443563 PZPP20742 1482 aa16.35■□□□□ 0.21
HDAC6-211ENST00000443563 UNC13BO14795 1591 aa16.34■□□□□ 0.21
HDAC6-211ENST00000443563 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
HDAC6-211ENST00000443563 LMTK2Q8IWU2 1503 aa16.33■□□□□ 0.2
HDAC6-211ENST00000443563 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
HDAC6-211ENST00000443563 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
HDAC6-211ENST00000443563 HFM1A2PYH4 1435 aa16.31■□□□□ 0.2
HDAC6-211ENST00000443563 NAIPQ13075 1403 aa16.31■□□□□ 0.2
HDAC6-211ENST00000443563 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
HDAC6-211ENST00000443563 MYO3AQ8NEV4 1616 aa16.29■□□□□ 0.2
HDAC6-211ENST00000443563 TET3O43151 1660 aa16.28■□□□□ 0.2
HDAC6-211ENST00000443563 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
HDAC6-211ENST00000443563 EFCAB6Q5THR3 1501 aa16.28■□□□□ 0.2
HDAC6-211ENST00000443563 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-211ENST00000443563 TNRQ92752 1358 aa16.26■□□□□ 0.19
HDAC6-211ENST00000443563 SPATA31D1Q6ZQQ2 1576 aa16.26■□□□□ 0.19
HDAC6-211ENST00000443563 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
HDAC6-211ENST00000443563 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
HDAC6-211ENST00000443563 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
HDAC6-211ENST00000443563 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
HDAC6-211ENST00000443563 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-211ENST00000443563 NUP155O75694 1391 aa16.25■□□□□ 0.19
HDAC6-211ENST00000443563 NLRP1Q9C000 1473 aa16.24■□□□□ 0.19
HDAC6-211ENST00000443563 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-211ENST00000443563 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
HDAC6-211ENST00000443563 E9PCH4 1651 aa16.2■□□□□ 0.18
HDAC6-211ENST00000443563 HSPA2P54652 639 aa16.19■□□□□ 0.18
HDAC6-211ENST00000443563 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
HDAC6-211ENST00000443563 TRIM52Q96A61 297 aa16.18■□□□□ 0.18
HDAC6-211ENST00000443563 UGGT1Q9NYU2 1555 aa16.17■□□□□ 0.18
HDAC6-211ENST00000443563 NOS1P29475 1434 aa16.17■□□□□ 0.18
HDAC6-211ENST00000443563 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
HDAC6-211ENST00000443563 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
HDAC6-211ENST00000443563 SYNMO15061 1565 aa16.15■□□□□ 0.18
HDAC6-211ENST00000443563 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-211ENST00000443563 SLC52A1Q9NWF4 448 aa16.15■□□□□ 0.18
HDAC6-211ENST00000443563 STRCQ7RTU9 1775 aa16.14■□□□□ 0.17
HDAC6-211ENST00000443563 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
HDAC6-211ENST00000443563 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
HDAC6-211ENST00000443563 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
HDAC6-211ENST00000443563 PIK3C2BO00750 1634 aa16.12■□□□□ 0.17
HDAC6-211ENST00000443563 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
HDAC6-211ENST00000443563 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-211ENST00000443563 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
HDAC6-211ENST00000443563 HRCP23327 699 aa16.1■□□□□ 0.17
HDAC6-211ENST00000443563 PKD2Q13563 968 aa16.1■□□□□ 0.17
HDAC6-211ENST00000443563 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
HDAC6-211ENST00000443563 IDI1Q13907 227 aa16.09■□□□□ 0.17
HDAC6-211ENST00000443563 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
HDAC6-211ENST00000443563 PTPRTO14522 1441 aa16.08■□□□□ 0.16
HDAC6-211ENST00000443563 ANKLE2Q86XL3 938 aa16.07■□□□□ 0.16
HDAC6-211ENST00000443563 TRPM2O94759 1503 aa16.06■□□□□ 0.16
HDAC6-211ENST00000443563 SLIT1O75093 1534 aa16.05■□□□□ 0.16
HDAC6-211ENST00000443563 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
HDAC6-211ENST00000443563 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-211ENST00000443563 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
HDAC6-211ENST00000443563 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
HDAC6-211ENST00000443563 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
HDAC6-211ENST00000443563 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
HDAC6-211ENST00000443563 KIF1BO60333 1816 aa16.03■□□□□ 0.16
HDAC6-211ENST00000443563 MYO5BQ9ULV0 1848 aa16.03■□□□□ 0.16
HDAC6-211ENST00000443563 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.16
HDAC6-211ENST00000443563 MED14O60244 1454 aa16.02■□□□□ 0.15
HDAC6-211ENST00000443563 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
HDAC6-211ENST00000443563 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
HDAC6-211ENST00000443563 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
HDAC6-211ENST00000443563 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
HDAC6-211ENST00000443563 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
HDAC6-211ENST00000443563 IQGAP1P46940 1657 aa16■□□□□ 0.15
HDAC6-211ENST00000443563 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
HDAC6-211ENST00000443563 NPHP4O75161 1426 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-211ENST00000443563 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDAC6-211ENST00000443563 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
HDAC6-211ENST00000443563 FOXD1Q16676 465 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms