RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 KDM5CP41229 1560 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-211ENST00000442691 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
NR1I3-211ENST00000442691 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
NR1I3-211ENST00000442691 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NR1I3-211ENST00000442691 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
NR1I3-211ENST00000442691 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
NR1I3-211ENST00000442691 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
NR1I3-211ENST00000442691 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
NR1I3-211ENST00000442691 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
NR1I3-211ENST00000442691 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
NR1I3-211ENST00000442691 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
NR1I3-211ENST00000442691 KDM6BO15054 1643 aa13.33□□□□□ -0.28
NR1I3-211ENST00000442691 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
NR1I3-211ENST00000442691 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
NR1I3-211ENST00000442691 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NR1I3-211ENST00000442691 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
NR1I3-211ENST00000442691 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
NR1I3-211ENST00000442691 UNC13BO14795 1591 aa13.32□□□□□ -0.28
NR1I3-211ENST00000442691 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
NR1I3-211ENST00000442691 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
NR1I3-211ENST00000442691 DSG3P32926 999 aa13.31□□□□□ -0.28
NR1I3-211ENST00000442691 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
NR1I3-211ENST00000442691 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
NR1I3-211ENST00000442691 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
NR1I3-211ENST00000442691 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
NR1I3-211ENST00000442691 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
NR1I3-211ENST00000442691 PZPP20742 1482 aa13.28□□□□□ -0.28
NR1I3-211ENST00000442691 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
NR1I3-211ENST00000442691 RICTORQ6R327 1708 aa13.27□□□□□ -0.28
NR1I3-211ENST00000442691 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
NR1I3-211ENST00000442691 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
NR1I3-211ENST00000442691 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
NR1I3-211ENST00000442691 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.29
NR1I3-211ENST00000442691 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
NR1I3-211ENST00000442691 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
NR1I3-211ENST00000442691 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
NR1I3-211ENST00000442691 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
NR1I3-211ENST00000442691 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
NR1I3-211ENST00000442691 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
NR1I3-211ENST00000442691 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
NR1I3-211ENST00000442691 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
NR1I3-211ENST00000442691 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
NR1I3-211ENST00000442691 A2MP01023 1474 aa13.23□□□□□ -0.29
NR1I3-211ENST00000442691 NUP155O75694 1391 aa13.22□□□□□ -0.29
NR1I3-211ENST00000442691 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
NR1I3-211ENST00000442691 PROM2Q8N271 834 aa13.22□□□□□ -0.29
NR1I3-211ENST00000442691 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
NR1I3-211ENST00000442691 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
NR1I3-211ENST00000442691 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
NR1I3-211ENST00000442691 ATP10AO60312 1499 aa13.2□□□□□ -0.3
NR1I3-211ENST00000442691 ABCA6Q8N139 1617 aa13.2□□□□□ -0.3
NR1I3-211ENST00000442691 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
NR1I3-211ENST00000442691 KANK1Q14678 1352 aa13.19□□□□□ -0.3
NR1I3-211ENST00000442691 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
NR1I3-211ENST00000442691 AGLP35573 1532 aa13.17□□□□□ -0.3
NR1I3-211ENST00000442691 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
NR1I3-211ENST00000442691 TET3O43151 1660 aa13.16□□□□□ -0.3
NR1I3-211ENST00000442691 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
NR1I3-211ENST00000442691 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
NR1I3-211ENST00000442691 PKD2Q13563 968 aa13.14□□□□□ -0.31
NR1I3-211ENST00000442691 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
NR1I3-211ENST00000442691 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
NR1I3-211ENST00000442691 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
NR1I3-211ENST00000442691 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
NR1I3-211ENST00000442691 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
NR1I3-211ENST00000442691 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
NR1I3-211ENST00000442691 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
NR1I3-211ENST00000442691 KIF3BO15066 747 aa13.1□□□□□ -0.31
NR1I3-211ENST00000442691 PTPRTO14522 1441 aa13.1□□□□□ -0.31
NR1I3-211ENST00000442691 TRPM2O94759 1503 aa13.09□□□□□ -0.31
NR1I3-211ENST00000442691 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
NR1I3-211ENST00000442691 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
NR1I3-211ENST00000442691 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
NR1I3-211ENST00000442691 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
NR1I3-211ENST00000442691 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
NR1I3-211ENST00000442691 E9PCH4 1651 aa13.07□□□□□ -0.32
NR1I3-211ENST00000442691 ABCC3O15438 1527 aa13.07□□□□□ -0.32
NR1I3-211ENST00000442691 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
NR1I3-211ENST00000442691 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-211ENST00000442691 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
NR1I3-211ENST00000442691 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 SPDYE2Q495Y8 402 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
NR1I3-211ENST00000442691 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.32
NR1I3-211ENST00000442691 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
NR1I3-211ENST00000442691 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
NR1I3-211ENST00000442691 CEP152O94986 1710 aa13.01□□□□□ -0.33
NR1I3-211ENST00000442691 NPATQ14207 1427 aa13□□□□□ -0.33
NR1I3-211ENST00000442691 NOS1P29475 1434 aa12.99□□□□□ -0.33
NR1I3-211ENST00000442691 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
NR1I3-211ENST00000442691 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
NR1I3-211ENST00000442691 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms