RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
VRK2-207ENST00000440705 PKD2Q13563 968 aa29.34■■■□□ 2.29
VRK2-207ENST00000440705 ZMYM4Q5VZL5 1548 aa29.34■■■□□ 2.29
VRK2-207ENST00000440705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.34■■■□□ 2.299e-6■□□□□ 10.7
VRK2-207ENST00000440705 FOXD1Q16676 465 aa29.33■■■□□ 2.29
VRK2-207ENST00000440705 ANKRD30BQ9BXX2 1392 aa29.33■■■□□ 2.29
VRK2-207ENST00000440705 IQGAP3Q86VI3 1631 aa29.32■■■□□ 2.28
VRK2-207ENST00000440705 ABCA6Q8N139 1617 aa29.32■■■□□ 2.28
VRK2-207ENST00000440705 DEPDC5O75140 1603 aa29.3■■■□□ 2.28
VRK2-207ENST00000440705 KIF3BO15066 747 aa29.3■■■□□ 2.28
VRK2-207ENST00000440705 DIP2CQ9Y2E4 1556 aa29.28■■■□□ 2.28
VRK2-207ENST00000440705 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
VRK2-207ENST00000440705 KANK1Q14678 1352 aa29.24■■■□□ 2.27
VRK2-207ENST00000440705 YEATS2Q9ULM3 1422 aa29.22■■■□□ 2.27
VRK2-207ENST00000440705 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
VRK2-207ENST00000440705 TONSLQ96HA7 1378 aa29.22■■■□□ 2.27
VRK2-207ENST00000440705 COL17A1Q9UMD9 1497 aaPredicted RBP29.21■■■□□ 2.27
VRK2-207ENST00000440705 PRDM15P57071 1507 aaPredicted RBP29.2■■■□□ 2.27
VRK2-207ENST00000440705 RNF17Q9BXT8 1623 aaKnown RBP29.2■■■□□ 2.26
VRK2-207ENST00000440705 VWDEQ8N2E2 1590 aa29.18■■■□□ 2.26
VRK2-207ENST00000440705 RPRD2Q5VT52 1461 aaKnown RBP29.18■■■□□ 2.26
VRK2-207ENST00000440705 MROH1Q8NDA8 1641 aa29.17■■■□□ 2.26
VRK2-207ENST00000440705 ATP10AO60312 1499 aa29.16■■■□□ 2.26
VRK2-207ENST00000440705 TET3O43151 1660 aa29.13■■■□□ 2.25
VRK2-207ENST00000440705 REREQ9P2R6 1566 aa29.12■■■□□ 2.25
VRK2-207ENST00000440705 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
VRK2-207ENST00000440705 GGT6Q6P531 493 aa29.09■■■□□ 2.25
VRK2-207ENST00000440705 LMTK2Q8IWU2 1503 aa29.07■■■□□ 2.24
VRK2-207ENST00000440705 E9PCH4 1651 aa29.07■■■□□ 2.24
VRK2-207ENST00000440705 ARHGEF40Q8TER5 1519 aa29.06■■■□□ 2.24
VRK2-207ENST00000440705 AGLP35573 1532 aa29.03■■■□□ 2.24
VRK2-207ENST00000440705 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
VRK2-207ENST00000440705 PLA2R1Q13018 1463 aa29.02■■■□□ 2.24
VRK2-207ENST00000440705 L3MBTL2Q969R5 705 aa29.01■■■□□ 2.23
VRK2-207ENST00000440705 CEP152O94986 1710 aa29.01■■■□□ 2.23
VRK2-207ENST00000440705 WASHC2CQ9Y4E1 1318 aa29.01■■■□□ 2.23
VRK2-207ENST00000440705 EFCAB6Q5THR3 1501 aa29■■■□□ 2.23
VRK2-207ENST00000440705 ABCC3O15438 1527 aa28.98■■■□□ 2.23
VRK2-207ENST00000440705 PTPRTO14522 1441 aa28.97■■■□□ 2.23
VRK2-207ENST00000440705 ZC3H13Q5T200 1668 aaKnown RBP28.96■■■□□ 2.23
VRK2-207ENST00000440705 SPHKAPQ2M3C7 1700 aa28.96■■■□□ 2.23
VRK2-207ENST00000440705 PPP6R1Q9UPN7 881 aa28.95■■■□□ 2.22
VRK2-207ENST00000440705 TRPM2O94759 1503 aa28.94■■■□□ 2.22
VRK2-207ENST00000440705 CAMSAP1Q5T5Y3 1602 aa28.9■■■□□ 2.22
VRK2-207ENST00000440705 ZNF316A6NFI3 1004 aaPredicted RBP28.89■■■□□ 2.22
VRK2-207ENST00000440705 SIGLEC1Q9BZZ2 1709 aa28.88■■■□□ 2.21
VRK2-207ENST00000440705 NPATQ14207 1427 aa28.88■■■□□ 2.21
VRK2-207ENST00000440705 ARHGAP31Q2M1Z3 1444 aa28.86■■■□□ 2.21
VRK2-207ENST00000440705 CLTCL1P53675 1640 aa28.82■■■□□ 2.2
VRK2-207ENST00000440705 CNTLNQ9NXG0 1405 aa28.8■■■□□ 2.2
VRK2-207ENST00000440705 ARID4BQ4LE39 1312 aaPredicted RBP28.79■■■□□ 2.2
VRK2-207ENST00000440705 CFAP65Q6ZU64 1925 aaKnown RBP28.78■■■□□ 2.2
VRK2-207ENST00000440705 RGL3Q3MIN7 710 aa28.77■■■□□ 2.2
VRK2-207ENST00000440705 DCAF11Q8TEB1 546 aa28.77■■■□□ 2.2
VRK2-207ENST00000440705 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
VRK2-207ENST00000440705 MLECQ14165 292 aa28.77■■■□□ 2.2
VRK2-207ENST00000440705 NBPF8Q3BBV2 869 aa28.76■■■□□ 2.19
VRK2-207ENST00000440705 NOS1P29475 1434 aa28.75■■■□□ 2.19
VRK2-207ENST00000440705 UHRF1BP1Q6BDS2 1440 aa28.75■■■□□ 2.19
VRK2-207ENST00000440705 NEURL4Q96JN8 1562 aa28.75■■■□□ 2.19
VRK2-207ENST00000440705 CLTCQ00610 1675 aaKnown RBP28.73■■■□□ 2.19
VRK2-207ENST00000440705 ESF1Q9H501 851 aaKnown RBP28.73■■■□□ 2.19
VRK2-207ENST00000440705 KIF1BO60333 1816 aa28.72■■■□□ 2.19
VRK2-207ENST00000440705 KDM2AQ9Y2K7 1162 aa28.72■■■□□ 2.19
VRK2-207ENST00000440705 UGGT1Q9NYU2 1555 aa28.7■■■□□ 2.19
VRK2-207ENST00000440705 STAC3Q96MF2 364 aa28.7■■■□□ 2.18
VRK2-207ENST00000440705 ZNF326Q5BKZ1 582 aaKnown RBP28.68■■■□□ 2.18
VRK2-207ENST00000440705 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
VRK2-207ENST00000440705 SYNMO15061 1565 aa28.65■■■□□ 2.18
VRK2-207ENST00000440705 SLC52A1Q9NWF4 448 aa28.65■■■□□ 2.18
VRK2-207ENST00000440705 PIK3C2BO00750 1634 aa28.64■■■□□ 2.18
VRK2-207ENST00000440705 PRAG1Q86YV5 1406 aa28.63■■■□□ 2.17
VRK2-207ENST00000440705 ERVK-7P63135 1459 aa28.62■■■□□ 2.17
VRK2-207ENST00000440705 RALGAPBQ86X10 1494 aa28.61■■■□□ 2.17
VRK2-207ENST00000440705 ZMYM3Q14202 1370 aa28.61■■■□□ 2.17
VRK2-207ENST00000440705 ADGRB3O60242 1522 aa28.61■■■□□ 2.17
VRK2-207ENST00000440705 EIF4G2P78344 907 aaKnown RBP eCLIP28.59■■■□□ 2.17
VRK2-207ENST00000440705 FBXO31Q5XUX0 539 aaPredicted RBP28.59■■■□□ 2.17
VRK2-207ENST00000440705 CHGAP10645 457 aaKnown RBP28.58■■■□□ 2.16
VRK2-207ENST00000440705 IDI1Q13907 227 aa28.57■■■□□ 2.16
VRK2-207ENST00000440705 SPATA31D1Q6ZQQ2 1576 aa28.57■■■□□ 2.16
VRK2-207ENST00000440705 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
VRK2-207ENST00000440705 RPGRIP1LQ68CZ1 1315 aa28.54■■■□□ 2.16
VRK2-207ENST00000440705 TRPM1Q7Z4N2 1603 aa28.53■■■□□ 2.16
VRK2-207ENST00000440705 HSPA5P11021 654 aaKnown RBP28.52■■■□□ 2.16
VRK2-207ENST00000440705 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.16
VRK2-207ENST00000440705 IFT172Q9UG01 1749 aa28.51■■■□□ 2.16
VRK2-207ENST00000440705 MYOM2P54296 1465 aa28.51■■■□□ 2.15
VRK2-207ENST00000440705 HIRIP3Q9BW71 556 aaPredicted RBP28.5■■■□□ 2.15
VRK2-207ENST00000440705 ROCK2O75116 1388 aaKnown RBP28.49■■■□□ 2.15
VRK2-207ENST00000440705 MADDQ8WXG6 1647 aa28.49■■■□□ 2.15
VRK2-207ENST00000440705 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
VRK2-207ENST00000440705 FER1L4A9Z1Z3 1794 aa28.48■■■□□ 2.15
VRK2-207ENST00000440705 PPLO60437 1756 aa28.46■■■□□ 2.15
VRK2-207ENST00000440705 TMEM131LA2VDJ0 1609 aa28.46■■■□□ 2.15
VRK2-207ENST00000440705 GPRASP1Q5JY77 1395 aa28.45■■■□□ 2.14
VRK2-207ENST00000440705 USP47Q96K76 1375 aa28.44■■■□□ 2.14
VRK2-207ENST00000440705 LAMC1P11047 1609 aa28.42■■■□□ 2.14
VRK2-207ENST00000440705 NBPF1Q3BBV0 1214 aa28.42■■■□□ 2.14
VRK2-207ENST00000440705 STAG3Q9UJ98 1225 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms