RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
LTBR-202ENST00000440421 DUOX2Q9NRD8 1548 aa21.21■□□□□ 0.99
LTBR-202ENST00000440421 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
LTBR-202ENST00000440421 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.98
LTBR-202ENST00000440421 NPATQ14207 1427 aa21.2■□□□□ 0.98
LTBR-202ENST00000440421 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
LTBR-202ENST00000440421 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
LTBR-202ENST00000440421 PTPRKQ15262 1439 aa21.18■□□□□ 0.98
LTBR-202ENST00000440421 RNF17Q9BXT8 1623 aaKnown RBP21.17■□□□□ 0.98
LTBR-202ENST00000440421 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
LTBR-202ENST00000440421 FAM135AQ9P2D6 1515 aa21.15■□□□□ 0.98
LTBR-202ENST00000440421 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
LTBR-202ENST00000440421 MROH1Q8NDA8 1641 aa21.12■□□□□ 0.97
LTBR-202ENST00000440421 MYO3AQ8NEV4 1616 aa21.12■□□□□ 0.97
LTBR-202ENST00000440421 FBXO31Q5XUX0 539 aaPredicted RBP21.12■□□□□ 0.97
LTBR-202ENST00000440421 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
LTBR-202ENST00000440421 ABCC3O15438 1527 aa21.1■□□□□ 0.97
LTBR-202ENST00000440421 PZPP20742 1482 aa21.1■□□□□ 0.97
LTBR-202ENST00000440421 ZC3H13Q5T200 1668 aaKnown RBP21.09■□□□□ 0.97
LTBR-202ENST00000440421 ADGRL2O95490 1459 aa21.09■□□□□ 0.97
LTBR-202ENST00000440421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
LTBR-202ENST00000440421 CEP152O94986 1710 aa21.09■□□□□ 0.97
LTBR-202ENST00000440421 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
LTBR-202ENST00000440421 ITGAEP38570 1179 aa21.07■□□□□ 0.96
LTBR-202ENST00000440421 TNRQ92752 1358 aa21.07■□□□□ 0.96
LTBR-202ENST00000440421 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
LTBR-202ENST00000440421 ZNF142P52746 1687 aaPredicted RBP21.05■□□□□ 0.96
LTBR-202ENST00000440421 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
LTBR-202ENST00000440421 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
LTBR-202ENST00000440421 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
LTBR-202ENST00000440421 A2ML1A8K2U0 1454 aa21.01■□□□□ 0.95
LTBR-202ENST00000440421 KANK1Q14678 1352 aa21.01■□□□□ 0.95
LTBR-202ENST00000440421 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
LTBR-202ENST00000440421 ANKRD50Q9ULJ7 1429 aa21.01■□□□□ 0.95
LTBR-202ENST00000440421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
LTBR-202ENST00000440421 ERVK-7P63135 1459 aa20.98■□□□□ 0.95
LTBR-202ENST00000440421 NCKAP5LQ9HCH0 1330 aa20.98■□□□□ 0.95
LTBR-202ENST00000440421 CFAP65Q6ZU64 1925 aaKnown RBP20.98■□□□□ 0.95
LTBR-202ENST00000440421 SPATA31D1Q6ZQQ2 1576 aa20.97■□□□□ 0.95
LTBR-202ENST00000440421 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
LTBR-202ENST00000440421 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
LTBR-202ENST00000440421 NLRP1Q9C000 1473 aa20.95■□□□□ 0.94
LTBR-202ENST00000440421 PTPRTO14522 1441 aa20.95■□□□□ 0.94
LTBR-202ENST00000440421 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
LTBR-202ENST00000440421 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
LTBR-202ENST00000440421 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
LTBR-202ENST00000440421 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
LTBR-202ENST00000440421 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
LTBR-202ENST00000440421 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
LTBR-202ENST00000440421 PKD2Q13563 968 aa20.9■□□□□ 0.94
LTBR-202ENST00000440421 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
LTBR-202ENST00000440421 UNC13BO14795 1591 aa20.88■□□□□ 0.93
LTBR-202ENST00000440421 EFCAB6Q5THR3 1501 aa20.88■□□□□ 0.93
LTBR-202ENST00000440421 CERKQ8TCT0 537 aa20.86■□□□□ 0.93
LTBR-202ENST00000440421 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
LTBR-202ENST00000440421 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
LTBR-202ENST00000440421 TET3O43151 1660 aa20.83■□□□□ 0.93
LTBR-202ENST00000440421 UBR1Q8IWV7 1749 aa20.83■□□□□ 0.92
LTBR-202ENST00000440421 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
LTBR-202ENST00000440421 FBXO41Q8TF61 875 aa20.82■□□□□ 0.92
LTBR-202ENST00000440421 SYNMO15061 1565 aa20.81■□□□□ 0.92
LTBR-202ENST00000440421 PIK3C2BO00750 1634 aa20.81■□□□□ 0.92
LTBR-202ENST00000440421 NUP155O75694 1391 aa20.81■□□□□ 0.92
LTBR-202ENST00000440421 GCC2Q8IWJ2 1684 aa20.8■□□□□ 0.92
LTBR-202ENST00000440421 NOS1P29475 1434 aa20.8■□□□□ 0.92
LTBR-202ENST00000440421 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
LTBR-202ENST00000440421 IQGAP3Q86VI3 1631 aa20.79■□□□□ 0.92
LTBR-202ENST00000440421 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
LTBR-202ENST00000440421 RPRD2Q5VT52 1461 aaKnown RBP20.79■□□□□ 0.92
LTBR-202ENST00000440421 LTBP4Q8N2S1 1624 aa20.78■□□□□ 0.92
LTBR-202ENST00000440421 IDI1Q13907 227 aa20.78■□□□□ 0.92
LTBR-202ENST00000440421 NAIPQ13075 1403 aa20.78■□□□□ 0.92
LTBR-202ENST00000440421 NPHP4O75161 1426 aaPredicted RBP20.76■□□□□ 0.91
LTBR-202ENST00000440421 E9PCH4 1651 aa20.76■□□□□ 0.91
LTBR-202ENST00000440421 MED14O60244 1454 aa20.74■□□□□ 0.91
LTBR-202ENST00000440421 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
LTBR-202ENST00000440421 IQGAP1P46940 1657 aa20.73■□□□□ 0.91
LTBR-202ENST00000440421 TXNDC2Q86VQ3 553 aa20.72■□□□□ 0.91
LTBR-202ENST00000440421 SCAF11Q99590 1463 aaKnown RBP20.72■□□□□ 0.91
LTBR-202ENST00000440421 ARHGAP23Q9P227 1491 aa20.72■□□□□ 0.91
LTBR-202ENST00000440421 SLIT1O75093 1534 aa20.72■□□□□ 0.91
LTBR-202ENST00000440421 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
LTBR-202ENST00000440421 LTKP29376 864 aa20.71■□□□□ 0.91
LTBR-202ENST00000440421 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
LTBR-202ENST00000440421 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.91
LTBR-202ENST00000440421 ADGRB3O60242 1522 aa20.7■□□□□ 0.9
LTBR-202ENST00000440421 EID1Q9Y6B2 187 aa20.7■□□□□ 0.9
LTBR-202ENST00000440421 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
LTBR-202ENST00000440421 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
LTBR-202ENST00000440421 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.9
LTBR-202ENST00000440421 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.89
LTBR-202ENST00000440421 IQSEC2Q5JU85 1478 aa20.62■□□□□ 0.89
LTBR-202ENST00000440421 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
LTBR-202ENST00000440421 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
LTBR-202ENST00000440421 CPS1P31327 1500 aa20.61■□□□□ 0.89
LTBR-202ENST00000440421 RIMS2Q9UQ26 1411 aa20.59■□□□□ 0.89
LTBR-202ENST00000440421 BCANQ96GW7 911 aa20.58■□□□□ 0.89
LTBR-202ENST00000440421 STRCP1A6NGW2 1772 aa20.57■□□□□ 0.88
LTBR-202ENST00000440421 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
LTBR-202ENST00000440421 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms