RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
ACTN4-204ENST00000440400 NUP155O75694 1391 aa18.87■□□□□ 0.61
ACTN4-204ENST00000440400 NEO1Q92859 1461 aa18.86■□□□□ 0.61
ACTN4-204ENST00000440400 TET3O43151 1660 aa18.85■□□□□ 0.61
ACTN4-204ENST00000440400 ZNF518AQ6AHZ1 1483 aa18.84■□□□□ 0.61
ACTN4-204ENST00000440400 NEURL4Q96JN8 1562 aa18.84■□□□□ 0.61
ACTN4-204ENST00000440400 E9PCH4 1651 aa18.83■□□□□ 0.61
ACTN4-204ENST00000440400 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
ACTN4-204ENST00000440400 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
ACTN4-204ENST00000440400 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
ACTN4-204ENST00000440400 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
ACTN4-204ENST00000440400 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
ACTN4-204ENST00000440400 PKD2Q13563 968 aa18.81■□□□□ 0.6
ACTN4-204ENST00000440400 FOXD1Q16676 465 aa18.81■□□□□ 0.6
ACTN4-204ENST00000440400 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
ACTN4-204ENST00000440400 CD109Q6YHK3 1445 aa18.8■□□□□ 0.6
ACTN4-204ENST00000440400 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
ACTN4-204ENST00000440400 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 SPHKAPQ2M3C7 1700 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 LAMC1P11047 1609 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 FRMPD1Q5SYB0 1578 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 DIP2BQ9P265 1576 aa18.79■□□□□ 0.6
ACTN4-204ENST00000440400 CEP152O94986 1710 aa18.78■□□□□ 0.6
ACTN4-204ENST00000440400 TRPM2O94759 1503 aa18.77■□□□□ 0.6
ACTN4-204ENST00000440400 PPRC1Q5VV67 1664 aaKnown RBP18.77■□□□□ 0.6
ACTN4-204ENST00000440400 SPAG9O60271 1321 aaKnown RBP18.77■□□□□ 0.6
ACTN4-204ENST00000440400 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
ACTN4-204ENST00000440400 ABCA6Q8N139 1617 aa18.76■□□□□ 0.59
ACTN4-204ENST00000440400 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
ACTN4-204ENST00000440400 PTPRTO14522 1441 aa18.75■□□□□ 0.59
ACTN4-204ENST00000440400 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
ACTN4-204ENST00000440400 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
ACTN4-204ENST00000440400 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
ACTN4-204ENST00000440400 MIER1Q8N108 512 aa18.72■□□□□ 0.59
ACTN4-204ENST00000440400 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
ACTN4-204ENST00000440400 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
ACTN4-204ENST00000440400 NBPF8Q3BBV2 869 aa18.7■□□□□ 0.58
ACTN4-204ENST00000440400 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
ACTN4-204ENST00000440400 DIP2CQ9Y2E4 1556 aa18.7■□□□□ 0.58
ACTN4-204ENST00000440400 A2MP01023 1474 aa18.68■□□□□ 0.58
ACTN4-204ENST00000440400 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
ACTN4-204ENST00000440400 ZC3H13Q5T200 1668 aaKnown RBP18.67■□□□□ 0.58
ACTN4-204ENST00000440400 REREQ9P2R6 1566 aa18.66■□□□□ 0.58
ACTN4-204ENST00000440400 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
ACTN4-204ENST00000440400 IFT172Q9UG01 1749 aa18.65■□□□□ 0.58
ACTN4-204ENST00000440400 ANP32EQ9BTT0 268 aa18.64■□□□□ 0.57
ACTN4-204ENST00000440400 KIF13AQ9H1H9 1805 aa18.64■□□□□ 0.57
ACTN4-204ENST00000440400 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
ACTN4-204ENST00000440400 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
ACTN4-204ENST00000440400 KIAA1210Q9ULL0 1709 aa18.62■□□□□ 0.57
ACTN4-204ENST00000440400 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
ACTN4-204ENST00000440400 GPRASP1Q5JY77 1395 aa18.61■□□□□ 0.57
ACTN4-204ENST00000440400 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
ACTN4-204ENST00000440400 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
ACTN4-204ENST00000440400 KANK1Q14678 1352 aa18.58■□□□□ 0.56
ACTN4-204ENST00000440400 ABCC3O15438 1527 aa18.57■□□□□ 0.56
ACTN4-204ENST00000440400 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
ACTN4-204ENST00000440400 PIK3C2BO00750 1634 aa18.57■□□□□ 0.56
ACTN4-204ENST00000440400 WASHC2AQ641Q2 1341 aa18.56■□□□□ 0.56
ACTN4-204ENST00000440400 KIF1BO60333 1816 aa18.56■□□□□ 0.56
ACTN4-204ENST00000440400 IQGAP1P46940 1657 aa18.55■□□□□ 0.56
ACTN4-204ENST00000440400 CCDC7Q96M83 1385 aa18.54■□□□□ 0.56
ACTN4-204ENST00000440400 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
ACTN4-204ENST00000440400 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-204ENST00000440400 ADGRB3O60242 1522 aa18.53■□□□□ 0.56
ACTN4-204ENST00000440400 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
ACTN4-204ENST00000440400 MYOM2P54296 1465 aa18.53■□□□□ 0.56
ACTN4-204ENST00000440400 SIGLEC1Q9BZZ2 1709 aa18.52■□□□□ 0.56
ACTN4-204ENST00000440400 AGLP35573 1532 aa18.52■□□□□ 0.56
ACTN4-204ENST00000440400 USP47Q96K76 1375 aa18.52■□□□□ 0.55
ACTN4-204ENST00000440400 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
ACTN4-204ENST00000440400 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
ACTN4-204ENST00000440400 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
ACTN4-204ENST00000440400 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
ACTN4-204ENST00000440400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.554e-8■□□□□ 9.8
ACTN4-204ENST00000440400 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
ACTN4-204ENST00000440400 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
ACTN4-204ENST00000440400 PPLO60437 1756 aa18.47■□□□□ 0.55
ACTN4-204ENST00000440400 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
ACTN4-204ENST00000440400 NOS1P29475 1434 aa18.46■□□□□ 0.55
ACTN4-204ENST00000440400 NPATQ14207 1427 aa18.46■□□□□ 0.55
ACTN4-204ENST00000440400 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
ACTN4-204ENST00000440400 KIF3BO15066 747 aa18.46■□□□□ 0.55
ACTN4-204ENST00000440400 SYNMO15061 1565 aa18.46■□□□□ 0.54
ACTN4-204ENST00000440400 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
ACTN4-204ENST00000440400 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
ACTN4-204ENST00000440400 YEATS2Q9ULM3 1422 aa18.44■□□□□ 0.54
ACTN4-204ENST00000440400 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
ACTN4-204ENST00000440400 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
ACTN4-204ENST00000440400 MYO3AQ8NEV4 1616 aa18.43■□□□□ 0.54
ACTN4-204ENST00000440400 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
ACTN4-204ENST00000440400 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
ACTN4-204ENST00000440400 SETBP1Q9Y6X0 1596 aa18.41■□□□□ 0.54
ACTN4-204ENST00000440400 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
ACTN4-204ENST00000440400 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
ACTN4-204ENST00000440400 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-204ENST00000440400 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
ACTN4-204ENST00000440400 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
ACTN4-204ENST00000440400 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms