RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
SMAD3-202ENST00000439724 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
SMAD3-202ENST00000439724 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-202ENST00000439724 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
SMAD3-202ENST00000439724 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
SMAD3-202ENST00000439724 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
SMAD3-202ENST00000439724 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
SMAD3-202ENST00000439724 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
SMAD3-202ENST00000439724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■□□□ 12.5
SMAD3-202ENST00000439724 NEO1Q92859 1461 aa16.59■□□□□ 0.25
SMAD3-202ENST00000439724 TET3O43151 1660 aa16.58■□□□□ 0.25
SMAD3-202ENST00000439724 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.25
SMAD3-202ENST00000439724 E9PCH4 1651 aa16.58■□□□□ 0.24
SMAD3-202ENST00000439724 PRDM15P57071 1507 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-202ENST00000439724 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
SMAD3-202ENST00000439724 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
SMAD3-202ENST00000439724 GLI2P10070 1586 aa16.56■□□□□ 0.24
SMAD3-202ENST00000439724 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
SMAD3-202ENST00000439724 MLH3Q9UHC1 1453 aa16.55■□□□□ 0.24
SMAD3-202ENST00000439724 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
SMAD3-202ENST00000439724 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
SMAD3-202ENST00000439724 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
SMAD3-202ENST00000439724 TRPM2O94759 1503 aa16.53■□□□□ 0.24
SMAD3-202ENST00000439724 RNF17Q9BXT8 1623 aaKnown RBP16.53■□□□□ 0.24
SMAD3-202ENST00000439724 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
SMAD3-202ENST00000439724 KANK1Q14678 1352 aa16.53■□□□□ 0.24
SMAD3-202ENST00000439724 CCDC7Q96M83 1385 aa16.52■□□□□ 0.24
SMAD3-202ENST00000439724 BCORL1Q5H9F3 1711 aa16.52■□□□□ 0.23
SMAD3-202ENST00000439724 A2MP01023 1474 aa16.51■□□□□ 0.23
SMAD3-202ENST00000439724 PTPRTO14522 1441 aa16.51■□□□□ 0.23
SMAD3-202ENST00000439724 USP47Q96K76 1375 aa16.51■□□□□ 0.23
SMAD3-202ENST00000439724 TRPM1Q7Z4N2 1603 aa16.5■□□□□ 0.23
SMAD3-202ENST00000439724 ANP32CO43423 234 aa16.5■□□□□ 0.23
SMAD3-202ENST00000439724 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 CEP152O94986 1710 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 CCER2I3L3R5 266 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
SMAD3-202ENST00000439724 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
SMAD3-202ENST00000439724 KIF3BO15066 747 aa16.48■□□□□ 0.23
SMAD3-202ENST00000439724 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
SMAD3-202ENST00000439724 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
SMAD3-202ENST00000439724 LAMC1P11047 1609 aa16.48■□□□□ 0.23
SMAD3-202ENST00000439724 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
SMAD3-202ENST00000439724 RICTORQ6R327 1708 aa16.47■□□□□ 0.23
SMAD3-202ENST00000439724 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
SMAD3-202ENST00000439724 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
SMAD3-202ENST00000439724 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
SMAD3-202ENST00000439724 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
SMAD3-202ENST00000439724 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
SMAD3-202ENST00000439724 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
SMAD3-202ENST00000439724 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
SMAD3-202ENST00000439724 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
SMAD3-202ENST00000439724 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
SMAD3-202ENST00000439724 ARID4BQ4LE39 1312 aaPredicted RBP16.44■□□□□ 0.22
SMAD3-202ENST00000439724 GPRASP1Q5JY77 1395 aa16.44■□□□□ 0.22
SMAD3-202ENST00000439724 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
SMAD3-202ENST00000439724 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
SMAD3-202ENST00000439724 ROCK2O75116 1388 aaKnown RBP16.42■□□□□ 0.22
SMAD3-202ENST00000439724 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
SMAD3-202ENST00000439724 MADDQ8WXG6 1647 aa16.39■□□□□ 0.21
SMAD3-202ENST00000439724 ZMYM4Q5VZL5 1548 aa16.39■□□□□ 0.21
SMAD3-202ENST00000439724 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
SMAD3-202ENST00000439724 KIF1BO60333 1816 aa16.37■□□□□ 0.21
SMAD3-202ENST00000439724 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
SMAD3-202ENST00000439724 ABCC3O15438 1527 aa16.36■□□□□ 0.21
SMAD3-202ENST00000439724 ZC3H13Q5T200 1668 aaKnown RBP16.34■□□□□ 0.21
SMAD3-202ENST00000439724 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
SMAD3-202ENST00000439724 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
SMAD3-202ENST00000439724 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
SMAD3-202ENST00000439724 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.21
SMAD3-202ENST00000439724 NPATQ14207 1427 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 MYOM2P54296 1465 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 UGGT1Q9NYU2 1555 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
SMAD3-202ENST00000439724 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
SMAD3-202ENST00000439724 MROH2AA6NES4 1674 aa16.31■□□□□ 0.2
SMAD3-202ENST00000439724 IQGAP1P46940 1657 aa16.31■□□□□ 0.2
SMAD3-202ENST00000439724 ADGRB3O60242 1522 aa16.31■□□□□ 0.2
SMAD3-202ENST00000439724 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
SMAD3-202ENST00000439724 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
SMAD3-202ENST00000439724 PRKRIP1Q9H875 184 aaPredicted RBP16.29■□□□□ 0.2
SMAD3-202ENST00000439724 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
SMAD3-202ENST00000439724 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
SMAD3-202ENST00000439724 GGT6Q6P531 493 aa16.28■□□□□ 0.2
SMAD3-202ENST00000439724 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
SMAD3-202ENST00000439724 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
SMAD3-202ENST00000439724 NOS1P29475 1434 aa16.26■□□□□ 0.19
SMAD3-202ENST00000439724 PIK3C2BO00750 1634 aa16.26■□□□□ 0.19
SMAD3-202ENST00000439724 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
SMAD3-202ENST00000439724 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
SMAD3-202ENST00000439724 AGLP35573 1532 aa16.24■□□□□ 0.19
SMAD3-202ENST00000439724 PPLO60437 1756 aa16.23■□□□□ 0.19
SMAD3-202ENST00000439724 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
SMAD3-202ENST00000439724 TESK2Q96S53 571 aa16.23■□□□□ 0.19
SMAD3-202ENST00000439724 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms