RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC012494.1-201ENST00000439259 DIP2CQ9Y2E4 1556 aa13.03□□□□□ -0.32
AC012494.1-201ENST00000439259 PROM2Q8N271 834 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 ABCA6Q8N139 1617 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.33
AC012494.1-201ENST00000439259 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
AC012494.1-201ENST00000439259 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
AC012494.1-201ENST00000439259 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
AC012494.1-201ENST00000439259 SAMD9LQ8IVG5 1584 aa13.01□□□□□ -0.33
AC012494.1-201ENST00000439259 SYCP2Q9BX26 1530 aa13□□□□□ -0.33
AC012494.1-201ENST00000439259 CCNB3Q8WWL7 1395 aa13□□□□□ -0.33
AC012494.1-201ENST00000439259 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
AC012494.1-201ENST00000439259 CLCN6P51797 869 aa12.99□□□□□ -0.33
AC012494.1-201ENST00000439259 KIDINS220Q9ULH0 1771 aa12.98□□□□□ -0.33
AC012494.1-201ENST00000439259 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
AC012494.1-201ENST00000439259 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
AC012494.1-201ENST00000439259 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
AC012494.1-201ENST00000439259 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
AC012494.1-201ENST00000439259 GABBR2O75899 941 aa12.94□□□□□ -0.34
AC012494.1-201ENST00000439259 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
AC012494.1-201ENST00000439259 AGLP35573 1532 aa12.93□□□□□ -0.34
AC012494.1-201ENST00000439259 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
AC012494.1-201ENST00000439259 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
AC012494.1-201ENST00000439259 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
AC012494.1-201ENST00000439259 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
AC012494.1-201ENST00000439259 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
AC012494.1-201ENST00000439259 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
AC012494.1-201ENST00000439259 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
AC012494.1-201ENST00000439259 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
AC012494.1-201ENST00000439259 C3P01024 1663 aa12.89□□□□□ -0.35
AC012494.1-201ENST00000439259 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
AC012494.1-201ENST00000439259 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
AC012494.1-201ENST00000439259 KANK4Q5T7N3 995 aaPredicted RBP12.88□□□□□ -0.35
AC012494.1-201ENST00000439259 GGT6Q6P531 493 aa12.88□□□□□ -0.35
AC012494.1-201ENST00000439259 A2MP01023 1474 aa12.88□□□□□ -0.35
AC012494.1-201ENST00000439259 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
AC012494.1-201ENST00000439259 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
AC012494.1-201ENST00000439259 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
AC012494.1-201ENST00000439259 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
AC012494.1-201ENST00000439259 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
AC012494.1-201ENST00000439259 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
AC012494.1-201ENST00000439259 ZMYM3Q14202 1370 aa12.85□□□□□ -0.35
AC012494.1-201ENST00000439259 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
AC012494.1-201ENST00000439259 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
AC012494.1-201ENST00000439259 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
AC012494.1-201ENST00000439259 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
AC012494.1-201ENST00000439259 SETD1BQ9UPS6 1966 aaKnown RBP12.82□□□□□ -0.36
AC012494.1-201ENST00000439259 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
AC012494.1-201ENST00000439259 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
AC012494.1-201ENST00000439259 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
AC012494.1-201ENST00000439259 KIF3BO15066 747 aa12.81□□□□□ -0.36
AC012494.1-201ENST00000439259 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
AC012494.1-201ENST00000439259 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
AC012494.1-201ENST00000439259 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
AC012494.1-201ENST00000439259 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
AC012494.1-201ENST00000439259 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
AC012494.1-201ENST00000439259 NPATQ14207 1427 aa12.79□□□□□ -0.36
AC012494.1-201ENST00000439259 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
AC012494.1-201ENST00000439259 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
AC012494.1-201ENST00000439259 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
AC012494.1-201ENST00000439259 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
AC012494.1-201ENST00000439259 MAP3K1Q13233 1512 aa12.77□□□□□ -0.37
AC012494.1-201ENST00000439259 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
AC012494.1-201ENST00000439259 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
AC012494.1-201ENST00000439259 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
AC012494.1-201ENST00000439259 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
AC012494.1-201ENST00000439259 CAMSAP1Q5T5Y3 1602 aa12.75□□□□□ -0.37
AC012494.1-201ENST00000439259 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
AC012494.1-201ENST00000439259 PTPRTO14522 1441 aa12.74□□□□□ -0.37
AC012494.1-201ENST00000439259 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
AC012494.1-201ENST00000439259 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
AC012494.1-201ENST00000439259 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
AC012494.1-201ENST00000439259 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
AC012494.1-201ENST00000439259 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
AC012494.1-201ENST00000439259 TNRQ92752 1358 aa12.69□□□□□ -0.38
AC012494.1-201ENST00000439259 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
AC012494.1-201ENST00000439259 FKBP8Q14318 412 aa12.69□□□□□ -0.38
AC012494.1-201ENST00000439259 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
AC012494.1-201ENST00000439259 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 PZPP20742 1482 aa12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 LTBP4Q8N2S1 1624 aa12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 ABCC5O15440 1437 aa12.68□□□□□ -0.38
AC012494.1-201ENST00000439259 A2ML1A8K2U0 1454 aa12.67□□□□□ -0.38
AC012494.1-201ENST00000439259 PKD2Q13563 968 aa12.67□□□□□ -0.38
AC012494.1-201ENST00000439259 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 PTPN23Q9H3S7 1636 aa12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 CHIC2Q9UKJ5 165 aa12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 KIF15Q9NS87 1388 aa12.66□□□□□ -0.38
AC012494.1-201ENST00000439259 MIER1Q8N108 512 aa12.65□□□□□ -0.38
AC012494.1-201ENST00000439259 ABCC3O15438 1527 aa12.65□□□□□ -0.38
AC012494.1-201ENST00000439259 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
AC012494.1-201ENST00000439259 DAPK1P53355 1430 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms