RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
PCNX3-202ENST00000439247 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
PCNX3-202ENST00000439247 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
PCNX3-202ENST00000439247 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
PCNX3-202ENST00000439247 SAMD9LQ8IVG5 1584 aa18.23■□□□□ 0.51
PCNX3-202ENST00000439247 DNMT1P26358 1616 aaKnown RBP18.22■□□□□ 0.51
PCNX3-202ENST00000439247 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
PCNX3-202ENST00000439247 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
PCNX3-202ENST00000439247 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.51
PCNX3-202ENST00000439247 SKAP1Q86WV1 359 aa18.21■□□□□ 0.5
PCNX3-202ENST00000439247 PLCH2O75038 1416 aa18.19■□□□□ 0.5
PCNX3-202ENST00000439247 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
PCNX3-202ENST00000439247 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
PCNX3-202ENST00000439247 MBD5Q9P267 1494 aa18.17■□□□□ 0.5
PCNX3-202ENST00000439247 BCORL1Q5H9F3 1711 aa18.17■□□□□ 0.5
PCNX3-202ENST00000439247 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
PCNX3-202ENST00000439247 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
PCNX3-202ENST00000439247 NEFMP07197 916 aa18.16■□□□□ 0.5
PCNX3-202ENST00000439247 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
PCNX3-202ENST00000439247 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
PCNX3-202ENST00000439247 USP47Q96K76 1375 aa18.15■□□□□ 0.5
PCNX3-202ENST00000439247 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
PCNX3-202ENST00000439247 PDE4AP27815 886 aa18.13■□□□□ 0.49
PCNX3-202ENST00000439247 POLR1AO95602 1720 aaPredicted RBP18.13■□□□□ 0.49
PCNX3-202ENST00000439247 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
PCNX3-202ENST00000439247 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
PCNX3-202ENST00000439247 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
PCNX3-202ENST00000439247 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
PCNX3-202ENST00000439247 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
PCNX3-202ENST00000439247 FANCAO15360 1455 aa18.1■□□□□ 0.49
PCNX3-202ENST00000439247 TRAPPC8Q9Y2L5 1435 aa18.09■□□□□ 0.49
PCNX3-202ENST00000439247 ROCK1Q13464 1354 aa18.09■□□□□ 0.49
PCNX3-202ENST00000439247 CCDC141Q6ZP82 1450 aa18.09■□□□□ 0.49
PCNX3-202ENST00000439247 CD109Q6YHK3 1445 aa18.08■□□□□ 0.49
PCNX3-202ENST00000439247 PLIN1O60240 522 aa18.08■□□□□ 0.49
PCNX3-202ENST00000439247 TSPY4P0CV99 314 aa18.08■□□□□ 0.49
PCNX3-202ENST00000439247 TSPY10P0CW01 314 aa18.08■□□□□ 0.49
PCNX3-202ENST00000439247 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
PCNX3-202ENST00000439247 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
PCNX3-202ENST00000439247 ABCC1P33527 1531 aa18.07■□□□□ 0.48
PCNX3-202ENST00000439247 RCAN3Q9UKA8 241 aa18.06■□□□□ 0.48
PCNX3-202ENST00000439247 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
PCNX3-202ENST00000439247 BACH2Q9BYV9 841 aa18.06■□□□□ 0.48
PCNX3-202ENST00000439247 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
PCNX3-202ENST00000439247 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
PCNX3-202ENST00000439247 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
PCNX3-202ENST00000439247 SLC4A3P48751 1232 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 ADGBQ8N7X0 1667 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 ARAP3Q8WWN8 1544 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
PCNX3-202ENST00000439247 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
PCNX3-202ENST00000439247 PKD2Q13563 968 aa18.03■□□□□ 0.48
PCNX3-202ENST00000439247 PZPP20742 1482 aa18.03■□□□□ 0.48
PCNX3-202ENST00000439247 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
PCNX3-202ENST00000439247 ADGRL1O94910 1474 aa18.02■□□□□ 0.47
PCNX3-202ENST00000439247 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.47
PCNX3-202ENST00000439247 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
PCNX3-202ENST00000439247 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
PCNX3-202ENST00000439247 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
PCNX3-202ENST00000439247 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
PCNX3-202ENST00000439247 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
PCNX3-202ENST00000439247 RSPH4AQ5TD94 716 aa18■□□□□ 0.47
PCNX3-202ENST00000439247 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
PCNX3-202ENST00000439247 KDM5CP41229 1560 aa17.99■□□□□ 0.47
PCNX3-202ENST00000439247 ANKRD50Q9ULJ7 1429 aa17.99■□□□□ 0.47
PCNX3-202ENST00000439247 MYBBP1AQ9BQG0 1328 aaKnown RBP17.97■□□□□ 0.47
PCNX3-202ENST00000439247 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
PCNX3-202ENST00000439247 SPAG9O60271 1321 aaKnown RBP17.95■□□□□ 0.46
PCNX3-202ENST00000439247 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
PCNX3-202ENST00000439247 RAPGEF3O95398 923 aa17.94■□□□□ 0.46
PCNX3-202ENST00000439247 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
PCNX3-202ENST00000439247 MAST1Q9Y2H9 1570 aa17.94■□□□□ 0.46
PCNX3-202ENST00000439247 GLI2P10070 1586 aa17.93■□□□□ 0.46
PCNX3-202ENST00000439247 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
PCNX3-202ENST00000439247 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
PCNX3-202ENST00000439247 WASHC2CQ9Y4E1 1318 aa17.93■□□□□ 0.46
PCNX3-202ENST00000439247 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
PCNX3-202ENST00000439247 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
PCNX3-202ENST00000439247 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
PCNX3-202ENST00000439247 MS4A1P11836 297 aa17.91■□□□□ 0.46
PCNX3-202ENST00000439247 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
PCNX3-202ENST00000439247 RALBP1Q15311 655 aa17.89■□□□□ 0.46
PCNX3-202ENST00000439247 NFKBIBQ15653 356 aa17.89■□□□□ 0.46
PCNX3-202ENST00000439247 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.46
PCNX3-202ENST00000439247 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.46
PCNX3-202ENST00000439247 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
PCNX3-202ENST00000439247 PLXNC1O60486 1568 aa17.89■□□□□ 0.45
PCNX3-202ENST00000439247 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
PCNX3-202ENST00000439247 KIF13AQ9H1H9 1805 aa17.89■□□□□ 0.45
PCNX3-202ENST00000439247 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
PCNX3-202ENST00000439247 PPRC1Q5VV67 1664 aaKnown RBP17.88■□□□□ 0.45
PCNX3-202ENST00000439247 ATP7AQ04656 1500 aa17.87■□□□□ 0.45
PCNX3-202ENST00000439247 GSE1Q14687 1217 aa17.87■□□□□ 0.45
PCNX3-202ENST00000439247 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
PCNX3-202ENST00000439247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.455e-6■■■■□ 19.5
PCNX3-202ENST00000439247 NEO1Q92859 1461 aa17.87■□□□□ 0.45
PCNX3-202ENST00000439247 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
PCNX3-202ENST00000439247 NUP155O75694 1391 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms