RNA–Protein interactions for RNA: ENST00000439161.5

GGA1-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-212ENST00000439161 DEPDC5O75140 1603 aa35.54■■■■□ 3.28
GGA1-212ENST00000439161 RAB3GAP2Q9H2M9 1393 aa35.54■■■■□ 3.28
GGA1-212ENST00000439161 UNC13BO14795 1591 aa35.51■■■■□ 3.27
GGA1-212ENST00000439161 MROH1Q8NDA8 1641 aa35.5■■■■□ 3.27
GGA1-212ENST00000439161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.49■■■■□ 3.272e-8■■□□□ 11.8
GGA1-212ENST00000439161 PRDM15P57071 1507 aaPredicted RBP35.48■■■■□ 3.27
GGA1-212ENST00000439161 HRCP23327 699 aa35.46■■■■□ 3.27
GGA1-212ENST00000439161 ACIN1Q9UKV3 1341 aaKnown RBP35.46■■■■□ 3.27
GGA1-212ENST00000439161 PPP6R1Q9UPN7 881 aa35.45■■■■□ 3.27
GGA1-212ENST00000439161 KANK1Q14678 1352 aa35.45■■■■□ 3.27
GGA1-212ENST00000439161 TRIM52Q96A61 297 aa35.43■■■■□ 3.26
GGA1-212ENST00000439161 NUP155O75694 1391 aa35.41■■■■□ 3.26
GGA1-212ENST00000439161 FAM135AQ9P2D6 1515 aa35.4■■■■□ 3.26
GGA1-212ENST00000439161 ADAMTSL3P82987 1691 aa35.4■■■■□ 3.26
GGA1-212ENST00000439161 VWDEQ8N2E2 1590 aa35.39■■■■□ 3.26
GGA1-212ENST00000439161 ESF1Q9H501 851 aaKnown RBP35.39■■■■□ 3.26
GGA1-212ENST00000439161 FER1L4A9Z1Z3 1794 aa35.38■■■■□ 3.25
GGA1-212ENST00000439161 WASHC2CQ9Y4E1 1318 aa35.38■■■■□ 3.25
GGA1-212ENST00000439161 KDM5DQ9BY66 1539 aa35.38■■■■□ 3.25
GGA1-212ENST00000439161 ZC3H13Q5T200 1668 aaKnown RBP35.37■■■■□ 3.25
GGA1-212ENST00000439161 IQGAP3Q86VI3 1631 aa35.36■■■■□ 3.25
GGA1-212ENST00000439161 CEP152O94986 1710 aa35.36■■■■□ 3.25
GGA1-212ENST00000439161 ABCC3O15438 1527 aa35.35■■■■□ 3.25
GGA1-212ENST00000439161 CLTCQ00610 1675 aaKnown RBP35.34■■■■□ 3.25
GGA1-212ENST00000439161 MADDQ8WXG6 1647 aa35.34■■■■□ 3.25
GGA1-212ENST00000439161 CNTLNQ9NXG0 1405 aa35.32■■■■□ 3.25
GGA1-212ENST00000439161 LMTK2Q8IWU2 1503 aa35.31■■■■□ 3.24
GGA1-212ENST00000439161 RIMS1Q86UR5 1692 aaKnown RBP35.27■■■■□ 3.24
GGA1-212ENST00000439161 PZPP20742 1482 aa35.27■■■■□ 3.24
GGA1-212ENST00000439161 MROH2AA6NES4 1674 aa35.27■■■■□ 3.24
GGA1-212ENST00000439161 CAMSAP1Q5T5Y3 1602 aa35.26■■■■□ 3.24
GGA1-212ENST00000439161 TET3O43151 1660 aa35.26■■■■□ 3.23
GGA1-212ENST00000439161 SLC4A1APQ9BWU0 796 aaKnown RBP35.23■■■■□ 3.23
GGA1-212ENST00000439161 MPHOSPH9Q99550 1183 aa35.21■■■■□ 3.23
GGA1-212ENST00000439161 EFCAB6Q5THR3 1501 aa35.21■■■■□ 3.23
GGA1-212ENST00000439161 KDM4FA0A1W2PPD8 638 aa35.2■■■■□ 3.23
GGA1-212ENST00000439161 ZMYM3Q14202 1370 aa35.2■■■■□ 3.23
GGA1-212ENST00000439161 ARHGAP31Q2M1Z3 1444 aa35.17■■■■□ 3.22
GGA1-212ENST00000439161 C3P01024 1663 aa35.14■■■■□ 3.22
GGA1-212ENST00000439161 E9PCH4 1651 aa35.14■■■■□ 3.22
GGA1-212ENST00000439161 PKD2Q13563 968 aa35.13■■■■□ 3.21
GGA1-212ENST00000439161 NPATQ14207 1427 aa35.13■■■■□ 3.21
GGA1-212ENST00000439161 PTPRMP28827 1452 aa35.11■■■■□ 3.21
GGA1-212ENST00000439161 RPRD2Q5VT52 1461 aaKnown RBP35.11■■■■□ 3.21
GGA1-212ENST00000439161 CFAP65Q6ZU64 1925 aaKnown RBP35.1■■■■□ 3.21
GGA1-212ENST00000439161 CEBPAP49715 358 aaPredicted RBP35.09■■■■□ 3.21
GGA1-212ENST00000439161 PLPPR3Q6T4P5 718 aa35.07■■■■□ 3.2
GGA1-212ENST00000439161 PREX1Q8TCU6 1659 aa35.04■■■■□ 3.2
GGA1-212ENST00000439161 DHX57Q6P158 1386 aaKnown RBP35.03■■■■□ 3.2
GGA1-212ENST00000439161 FBXO31Q5XUX0 539 aaPredicted RBP35.03■■■■□ 3.2
GGA1-212ENST00000439161 FOXD1Q16676 465 aa35.02■■■■□ 3.2
GGA1-212ENST00000439161 ERVK-7P63135 1459 aa35.02■■■■□ 3.2
GGA1-212ENST00000439161 SPATA31D1Q6ZQQ2 1576 aa35■■■■□ 3.19
GGA1-212ENST00000439161 SPHKAPQ2M3C7 1700 aa34.98■■■■□ 3.19
GGA1-212ENST00000439161 NOS1P29475 1434 aa34.98■■■■□ 3.19
GGA1-212ENST00000439161 PTPRTO14522 1441 aa34.95■■■■□ 3.19
GGA1-212ENST00000439161 TNRQ92752 1358 aa34.93■■■■□ 3.18
GGA1-212ENST00000439161 SYNMO15061 1565 aa34.91■■■■□ 3.18
GGA1-212ENST00000439161 TRPM2O94759 1503 aa34.9■■■■□ 3.18
GGA1-212ENST00000439161 PLA2R1Q13018 1463 aa34.9■■■■□ 3.18
GGA1-212ENST00000439161 SETD1BQ9UPS6 1966 aaKnown RBP34.89■■■■□ 3.18
GGA1-212ENST00000439161 ANKRD30BQ9BXX2 1392 aa34.87■■■■□ 3.17
GGA1-212ENST00000439161 SLC52A1Q9NWF4 448 aa34.83■■■■□ 3.17
GGA1-212ENST00000439161 UGGT1Q9NYU2 1555 aa34.81■■■■□ 3.16
GGA1-212ENST00000439161 PIK3C2BO00750 1634 aa34.81■■■■□ 3.16
GGA1-212ENST00000439161 MYO3AQ8NEV4 1616 aa34.81■■■■□ 3.16
GGA1-212ENST00000439161 CLTCL1P53675 1640 aa34.8■■■■□ 3.16
GGA1-212ENST00000439161 CCDC144AA2RUR9 1427 aa34.8■■■■□ 3.16
GGA1-212ENST00000439161 NLRP1Q9C000 1473 aa34.79■■■■□ 3.16
GGA1-212ENST00000439161 CCER1Q8TC90 406 aaPredicted RBP34.79■■■■□ 3.16
GGA1-212ENST00000439161 IDI1Q13907 227 aa34.78■■■■□ 3.16
GGA1-212ENST00000439161 UHRF1BP1Q6BDS2 1440 aa34.73■■■■□ 3.15
GGA1-212ENST00000439161 KIF1BO60333 1816 aa34.71■■■■□ 3.15
GGA1-212ENST00000439161 A2ML1A8K2U0 1454 aa34.71■■■■□ 3.15
GGA1-212ENST00000439161 CLSPNQ9HAW4 1339 aa34.7■■■■□ 3.15
GGA1-212ENST00000439161 CEP170BQ9Y4F5 1589 aaPredicted RBP34.7■■■■□ 3.14
GGA1-212ENST00000439161 ZNF142P52746 1687 aaPredicted RBP34.7■■■■□ 3.14
GGA1-212ENST00000439161 CHGAP10645 457 aaKnown RBP34.67■■■■□ 3.14
GGA1-212ENST00000439161 STAG3Q9UJ98 1225 aa34.67■■■■□ 3.14
GGA1-212ENST00000439161 ADGRB3O60242 1522 aa34.66■■■■□ 3.14
GGA1-212ENST00000439161 SIN3AQ96ST3 1273 aa34.65■■■■□ 3.14
GGA1-212ENST00000439161 KDM5AP29375 1690 aaKnown RBP34.65■■■■□ 3.14
GGA1-212ENST00000439161 UBR1Q8IWV7 1749 aa34.64■■■■□ 3.14
GGA1-212ENST00000439161 TMEM131LA2VDJ0 1609 aa34.64■■■■□ 3.14
GGA1-212ENST00000439161 MYO5BQ9ULV0 1848 aa34.62■■■■□ 3.13
GGA1-212ENST00000439161 NEUROD1Q13562 356 aa34.6■■■■□ 3.13
GGA1-212ENST00000439161 AEBP2Q6ZN18 517 aaPredicted RBP34.6■■■■□ 3.13
GGA1-212ENST00000439161 SPATA31E1Q6ZUB1 1445 aa34.57■■■■□ 3.13
GGA1-212ENST00000439161 THEMISQ8N1K5 641 aaPredicted RBP34.57■■■■□ 3.12
GGA1-212ENST00000439161 NEURL4Q96JN8 1562 aa34.57■■■■□ 3.12
GGA1-212ENST00000439161 LMTK3Q96Q04 1460 aa34.56■■■■□ 3.12
GGA1-212ENST00000439161 ZNF326Q5BKZ1 582 aaKnown RBP34.53■■■■□ 3.12
GGA1-212ENST00000439161 RGL3Q3MIN7 710 aa34.52■■■■□ 3.12
GGA1-212ENST00000439161 TMEM2Q9UHN6 1383 aa34.47■■■■□ 3.11
GGA1-212ENST00000439161 SLIT1O75093 1534 aa34.45■■■■□ 3.11
GGA1-212ENST00000439161 RPGRIP1LQ68CZ1 1315 aa34.45■■■■□ 3.11
GGA1-212ENST00000439161 RIMS2Q9UQ26 1411 aa34.44■■■■□ 3.1
GGA1-212ENST00000439161 ARHGAP23Q9P227 1491 aa34.44■■■■□ 3.1
GGA1-212ENST00000439161 HSPA2P54652 639 aa34.43■■■■□ 3.1
GGA1-212ENST00000439161 NEXMIFQ5QGS0 1516 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms