RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 MLH3Q9UHC1 1453 aa21.88■■□□□ 1.09
SGCE-205ENST00000437425 DEPDC5O75140 1603 aa21.86■■□□□ 1.09
SGCE-205ENST00000437425 ATP10AO60312 1499 aa21.84■■□□□ 1.09
SGCE-205ENST00000437425 KANK1Q14678 1352 aa21.84■■□□□ 1.09
SGCE-205ENST00000437425 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
SGCE-205ENST00000437425 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
SGCE-205ENST00000437425 HECW2Q9P2P5 1572 aa21.82■■□□□ 1.08
SGCE-205ENST00000437425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
SGCE-205ENST00000437425 DIP2BQ9P265 1576 aa21.8■■□□□ 1.08
SGCE-205ENST00000437425 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
SGCE-205ENST00000437425 A2MP01023 1474 aa21.78■■□□□ 1.08
SGCE-205ENST00000437425 PRDM15P57071 1507 aaPredicted RBP21.77■■□□□ 1.08
SGCE-205ENST00000437425 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
SGCE-205ENST00000437425 TET3O43151 1660 aa21.75■■□□□ 1.07
SGCE-205ENST00000437425 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
SGCE-205ENST00000437425 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
SGCE-205ENST00000437425 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
SGCE-205ENST00000437425 KIF3BO15066 747 aa21.73■■□□□ 1.07
SGCE-205ENST00000437425 EIF4G2P78344 907 aaKnown RBP eCLIP21.72■■□□□ 1.07
SGCE-205ENST00000437425 RNF17Q9BXT8 1623 aaKnown RBP21.72■■□□□ 1.07
SGCE-205ENST00000437425 RICTORQ6R327 1708 aa21.71■■□□□ 1.07
SGCE-205ENST00000437425 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.07
SGCE-205ENST00000437425 PLA2R1Q13018 1463 aa21.7■■□□□ 1.06
SGCE-205ENST00000437425 PTPRTO14522 1441 aa21.68■■□□□ 1.06
SGCE-205ENST00000437425 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
SGCE-205ENST00000437425 E9PCH4 1651 aa21.67■■□□□ 1.06
SGCE-205ENST00000437425 TRPM2O94759 1503 aa21.67■■□□□ 1.06
SGCE-205ENST00000437425 ZMYM4Q5VZL5 1548 aa21.67■■□□□ 1.06
SGCE-205ENST00000437425 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
SGCE-205ENST00000437425 STAC3Q96MF2 364 aa21.66■■□□□ 1.06
SGCE-205ENST00000437425 ABCA6Q8N139 1617 aa21.66■■□□□ 1.06
SGCE-205ENST00000437425 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.06
SGCE-205ENST00000437425 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.05
SGCE-205ENST00000437425 NEURL4Q96JN8 1562 aa21.63■■□□□ 1.05
SGCE-205ENST00000437425 DIP2CQ9Y2E4 1556 aa21.63■■□□□ 1.05
SGCE-205ENST00000437425 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
SGCE-205ENST00000437425 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
SGCE-205ENST00000437425 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
SGCE-205ENST00000437425 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
SGCE-205ENST00000437425 MIER1Q8N108 512 aa21.61■■□□□ 1.05
SGCE-205ENST00000437425 PPRC1Q5VV67 1664 aaKnown RBP21.61■■□□□ 1.05
SGCE-205ENST00000437425 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
SGCE-205ENST00000437425 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
SGCE-205ENST00000437425 CEP152O94986 1710 aa21.56■■□□□ 1.04
SGCE-205ENST00000437425 REREQ9P2R6 1566 aa21.56■■□□□ 1.04
SGCE-205ENST00000437425 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
SGCE-205ENST00000437425 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
SGCE-205ENST00000437425 ZC3H13Q5T200 1668 aaKnown RBP21.54■■□□□ 1.04
SGCE-205ENST00000437425 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
SGCE-205ENST00000437425 TSPOAP1O95153 1857 aa21.53■■□□□ 1.04
SGCE-205ENST00000437425 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
SGCE-205ENST00000437425 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
SGCE-205ENST00000437425 ABCC3O15438 1527 aa21.52■■□□□ 1.03
SGCE-205ENST00000437425 USP47Q96K76 1375 aa21.51■■□□□ 1.03
SGCE-205ENST00000437425 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
SGCE-205ENST00000437425 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
SGCE-205ENST00000437425 WASHC2CQ9Y4E1 1318 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 GGT6Q6P531 493 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 CLTCL1P53675 1640 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 YEATS2Q9ULM3 1422 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 LAMC1P11047 1609 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 RGL3Q3MIN7 710 aa21.5■■□□□ 1.03
SGCE-205ENST00000437425 ARHGAP31Q2M1Z3 1444 aa21.49■■□□□ 1.03
SGCE-205ENST00000437425 AGLP35573 1532 aa21.49■■□□□ 1.03
SGCE-205ENST00000437425 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
SGCE-205ENST00000437425 POLR1AO95602 1720 aaPredicted RBP21.49■■□□□ 1.03
SGCE-205ENST00000437425 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
SGCE-205ENST00000437425 GPRASP1Q5JY77 1395 aa21.48■■□□□ 1.03
SGCE-205ENST00000437425 ROCK2O75116 1388 aaKnown RBP21.47■■□□□ 1.03
SGCE-205ENST00000437425 CAMSAP1Q5T5Y3 1602 aa21.46■■□□□ 1.03
SGCE-205ENST00000437425 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
SGCE-205ENST00000437425 NPATQ14207 1427 aa21.45■■□□□ 1.03
SGCE-205ENST00000437425 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
SGCE-205ENST00000437425 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
SGCE-205ENST00000437425 KIF1BO60333 1816 aa21.44■■□□□ 1.02
SGCE-205ENST00000437425 ANP32CO43423 234 aa21.43■■□□□ 1.02
SGCE-205ENST00000437425 MYOM2P54296 1465 aa21.41■■□□□ 1.02
SGCE-205ENST00000437425 NOS1P29475 1434 aa21.4■■□□□ 1.02
SGCE-205ENST00000437425 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
SGCE-205ENST00000437425 MADDQ8WXG6 1647 aa21.39■■□□□ 1.01
SGCE-205ENST00000437425 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
SGCE-205ENST00000437425 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
SGCE-205ENST00000437425 ADGRB3O60242 1522 aa21.37■■□□□ 1.01
SGCE-205ENST00000437425 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
SGCE-205ENST00000437425 KIF7Q2M1P5 1343 aa21.36■■□□□ 1.01
SGCE-205ENST00000437425 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
SGCE-205ENST00000437425 PIK3C2BO00750 1634 aa21.33■■□□□ 1
SGCE-205ENST00000437425 IFT172Q9UG01 1749 aa21.32■■□□□ 1
SGCE-205ENST00000437425 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
SGCE-205ENST00000437425 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
SGCE-205ENST00000437425 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
SGCE-205ENST00000437425 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
SGCE-205ENST00000437425 SLC24A1O60721 1099 aa21.3■■□□□ 1
SGCE-205ENST00000437425 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
SGCE-205ENST00000437425 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
SGCE-205ENST00000437425 SYNMO15061 1565 aa21.27■■□□□ 1
SGCE-205ENST00000437425 SIGLEC1Q9BZZ2 1709 aa21.27■■□□□ 1
SGCE-205ENST00000437425 EIF3AQ14152 1382 aaKnown RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms