RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 EVC2Q86UK5 1308 aa19.86■□□□□ 0.77
PTPN13-204ENST00000436978 CSPP1Q1MSJ5 1256 aa19.85■□□□□ 0.77
PTPN13-204ENST00000436978 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
PTPN13-204ENST00000436978 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
PTPN13-204ENST00000436978 VGFO15240 615 aaPredicted RBP19.84■□□□□ 0.77
PTPN13-204ENST00000436978 TPM4P67936 248 aa19.84■□□□□ 0.77
PTPN13-204ENST00000436978 CENPJQ9HC77 1338 aaPredicted RBP19.84■□□□□ 0.77
PTPN13-204ENST00000436978 G3V3G9 751 aa19.84■□□□□ 0.77
PTPN13-204ENST00000436978 DCAF8Q5TAQ9 597 aa19.84■□□□□ 0.77
PTPN13-204ENST00000436978 KIF21BO75037 1637 aa19.82■□□□□ 0.76
PTPN13-204ENST00000436978 L3MBTL2Q969R5 705 aa19.82■□□□□ 0.76
PTPN13-204ENST00000436978 TRIM6-TRIM34B2RNG4 842 aa19.82■□□□□ 0.76
PTPN13-204ENST00000436978 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
PTPN13-204ENST00000436978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTPN13-204ENST00000436978 MYOM3Q5VTT5 1437 aa19.8■□□□□ 0.76
PTPN13-204ENST00000436978 HSP90B1P14625 803 aaKnown RBP19.8■□□□□ 0.76
PTPN13-204ENST00000436978 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
PTPN13-204ENST00000436978 COG3Q96JB2 828 aa19.78■□□□□ 0.76
PTPN13-204ENST00000436978 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
PTPN13-204ENST00000436978 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.75
PTPN13-204ENST00000436978 OSCARQ8IYS5 282 aa19.77■□□□□ 0.75
PTPN13-204ENST00000436978 ARHGAP5Q13017 1502 aa19.75■□□□□ 0.75
PTPN13-204ENST00000436978 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
PTPN13-204ENST00000436978 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
PTPN13-204ENST00000436978 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
PTPN13-204ENST00000436978 SUPT6HQ7KZ85 1726 aaKnown RBP19.75■□□□□ 0.75
PTPN13-204ENST00000436978 CHMP4CQ96CF2 233 aa19.74■□□□□ 0.75
PTPN13-204ENST00000436978 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
PTPN13-204ENST00000436978 USP47Q96K76 1375 aa19.73■□□□□ 0.75
PTPN13-204ENST00000436978 HECW1Q76N89 1606 aa19.73■□□□□ 0.75
PTPN13-204ENST00000436978 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPN13-204ENST00000436978 FYCO1Q9BQS8 1478 aa19.72■□□□□ 0.75
PTPN13-204ENST00000436978 EVA1CP58658 441 aa19.72■□□□□ 0.75
PTPN13-204ENST00000436978 PHF14O94880 888 aa19.72■□□□□ 0.75
PTPN13-204ENST00000436978 ERICH3Q5RHP9 1530 aa19.72■□□□□ 0.75
PTPN13-204ENST00000436978 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
PTPN13-204ENST00000436978 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
PTPN13-204ENST00000436978 ST18O60284 1047 aa19.71■□□□□ 0.75
PTPN13-204ENST00000436978 LTV1Q96GA3 475 aaPredicted RBP19.7■□□□□ 0.74
PTPN13-204ENST00000436978 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
PTPN13-204ENST00000436978 ROCK1Q13464 1354 aa19.69■□□□□ 0.74
PTPN13-204ENST00000436978 KIF16BQ96L93 1317 aa19.69■□□□□ 0.74
PTPN13-204ENST00000436978 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
PTPN13-204ENST00000436978 EFCAB5A4FU69 1503 aa19.68■□□□□ 0.74
PTPN13-204ENST00000436978 MFAP1P55081 439 aaKnown RBP19.68■□□□□ 0.74
PTPN13-204ENST00000436978 PANK3Q9H999 370 aa19.67■□□□□ 0.74
PTPN13-204ENST00000436978 E9PSI1 815 aa19.66■□□□□ 0.74
PTPN13-204ENST00000436978 STAC3Q96MF2 364 aa19.66■□□□□ 0.74
PTPN13-204ENST00000436978 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
PTPN13-204ENST00000436978 NOC3LQ8WTT2 800 aaKnown RBP19.66■□□□□ 0.74
PTPN13-204ENST00000436978 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
PTPN13-204ENST00000436978 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
PTPN13-204ENST00000436978 ST20-MTHFSA0A0A6YYL1 179 aa19.64■□□□□ 0.74
PTPN13-204ENST00000436978 RASSF8Q8NHQ8 419 aa19.64■□□□□ 0.74
PTPN13-204ENST00000436978 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
PTPN13-204ENST00000436978 NEXNQ0ZGT2 675 aa19.64■□□□□ 0.73
PTPN13-204ENST00000436978 NGEFQ8N5V2 710 aa19.64■□□□□ 0.73
PTPN13-204ENST00000436978 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
PTPN13-204ENST00000436978 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
PTPN13-204ENST00000436978 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
PTPN13-204ENST00000436978 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
PTPN13-204ENST00000436978 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
PTPN13-204ENST00000436978 TEFQ10587 303 aa19.62■□□□□ 0.73
PTPN13-204ENST00000436978 AMOTL1Q8IY63 956 aa19.61■□□□□ 0.73
PTPN13-204ENST00000436978 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
PTPN13-204ENST00000436978 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
PTPN13-204ENST00000436978 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
PTPN13-204ENST00000436978 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
PTPN13-204ENST00000436978 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
PTPN13-204ENST00000436978 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
PTPN13-204ENST00000436978 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
PTPN13-204ENST00000436978 PSME1Q06323 249 aa19.6■□□□□ 0.73
PTPN13-204ENST00000436978 NOL10Q9BSC4 688 aaKnown RBP19.59■□□□□ 0.73
PTPN13-204ENST00000436978 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
PTPN13-204ENST00000436978 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
PTPN13-204ENST00000436978 ZKSCAN2Q63HK3 967 aa19.58■□□□□ 0.73
PTPN13-204ENST00000436978 USP35Q9P2H5 1018 aa19.58■□□□□ 0.73
PTPN13-204ENST00000436978 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
PTPN13-204ENST00000436978 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
PTPN13-204ENST00000436978 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
PTPN13-204ENST00000436978 MEX3CQ5U5Q3 659 aaKnown RBP19.57■□□□□ 0.72
PTPN13-204ENST00000436978 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
PTPN13-204ENST00000436978 PLEKHH2Q8IVE3 1493 aa19.56■□□□□ 0.72
PTPN13-204ENST00000436978 TOMM22Q9NS69 142 aa19.56■□□□□ 0.72
PTPN13-204ENST00000436978 ATP6V1DQ9Y5K8 247 aa19.56■□□□□ 0.72
PTPN13-204ENST00000436978 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
PTPN13-204ENST00000436978 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
PTPN13-204ENST00000436978 H3BQV1 296 aa19.55■□□□□ 0.72
PTPN13-204ENST00000436978 IFFO2Q5TF58 517 aa19.55■□□□□ 0.72
PTPN13-204ENST00000436978 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
PTPN13-204ENST00000436978 AKAP17AQ02040 695 aaKnown RBP19.55■□□□□ 0.72
PTPN13-204ENST00000436978 DDX11L8A8MPP1 907 aa19.55■□□□□ 0.72
PTPN13-204ENST00000436978 CUL7Q14999 1698 aa19.54■□□□□ 0.72
PTPN13-204ENST00000436978 MARCH6O60337 910 aa19.54■□□□□ 0.72
PTPN13-204ENST00000436978 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
PTPN13-204ENST00000436978 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
PTPN13-204ENST00000436978 TRIM34Q9BYJ4 488 aa19.54■□□□□ 0.72
PTPN13-204ENST00000436978 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
PTPN13-204ENST00000436978 C9orf78Q9NZ63 289 aaPredicted RBP19.54■□□□□ 0.72
PTPN13-204ENST00000436978 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms