RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.143e-7■□□□□ 9.3
CLSTN1-203ENST00000435891 CHD1O14646 1710 aa14.18□□□□□ -0.14
CLSTN1-203ENST00000435891 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
CLSTN1-203ENST00000435891 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
CLSTN1-203ENST00000435891 NBPF1Q3BBV0 1214 aa14.16□□□□□ -0.14
CLSTN1-203ENST00000435891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLSTN1-203ENST00000435891 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
CLSTN1-203ENST00000435891 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
CLSTN1-203ENST00000435891 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
CLSTN1-203ENST00000435891 PLA2R1Q13018 1463 aa14.15□□□□□ -0.14
CLSTN1-203ENST00000435891 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
CLSTN1-203ENST00000435891 CCDC144AA2RUR9 1427 aa14.13□□□□□ -0.15
CLSTN1-203ENST00000435891 PLEKHH2Q8IVE3 1493 aa14.13□□□□□ -0.15
CLSTN1-203ENST00000435891 RSPH4AQ5TD94 716 aa14.13□□□□□ -0.15
CLSTN1-203ENST00000435891 TMC1Q8TDI8 760 aa14.12□□□□□ -0.15
CLSTN1-203ENST00000435891 CCDC136Q96JN2 1154 aa14.12□□□□□ -0.15
CLSTN1-203ENST00000435891 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
CLSTN1-203ENST00000435891 ERICH6BQ5W0A0 696 aa14.12□□□□□ -0.15
CLSTN1-203ENST00000435891 MSH5O43196 834 aa14.11□□□□□ -0.15
CLSTN1-203ENST00000435891 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
CLSTN1-203ENST00000435891 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
CLSTN1-203ENST00000435891 A2MP01023 1474 aa14.1□□□□□ -0.15
CLSTN1-203ENST00000435891 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
CLSTN1-203ENST00000435891 TRPM1Q7Z4N2 1603 aa14.09□□□□□ -0.15
CLSTN1-203ENST00000435891 ABCC2Q92887 1545 aa14.09□□□□□ -0.15
CLSTN1-203ENST00000435891 DEKP35659 375 aaKnown RBP14.09□□□□□ -0.15
CLSTN1-203ENST00000435891 UNC13BO14795 1591 aa14.08□□□□□ -0.15
CLSTN1-203ENST00000435891 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
CLSTN1-203ENST00000435891 E9PCH4 1651 aa14.07□□□□□ -0.16
CLSTN1-203ENST00000435891 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
CLSTN1-203ENST00000435891 MYO5CQ9NQX4 1742 aa14.06□□□□□ -0.16
CLSTN1-203ENST00000435891 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
CLSTN1-203ENST00000435891 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
CLSTN1-203ENST00000435891 TESK2Q96S53 571 aa14.05□□□□□ -0.16
CLSTN1-203ENST00000435891 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
CLSTN1-203ENST00000435891 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 IQGAP3Q86VI3 1631 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 PLXNC1O60486 1568 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 RALBP1Q15311 655 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 GPRASP1Q5JY77 1395 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 TRAPPC8Q9Y2L5 1435 aa14.04□□□□□ -0.16
CLSTN1-203ENST00000435891 NBR1Q14596 966 aa14.03□□□□□ -0.16
CLSTN1-203ENST00000435891 PLCH2O75038 1416 aa14.02□□□□□ -0.16
CLSTN1-203ENST00000435891 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
CLSTN1-203ENST00000435891 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.17
CLSTN1-203ENST00000435891 PARD3Q8TEW0 1356 aa14.01□□□□□ -0.17
CLSTN1-203ENST00000435891 CC2D1BQ5T0F9 858 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-203ENST00000435891 AFAP1Q8N556 730 aa14.01□□□□□ -0.17
CLSTN1-203ENST00000435891 ZCCHC11Q5TAX3 1644 aaKnown RBP14.01□□□□□ -0.17
CLSTN1-203ENST00000435891 EFCAB2Q5VUJ9 269 aa14□□□□□ -0.17
CLSTN1-203ENST00000435891 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
CLSTN1-203ENST00000435891 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
CLSTN1-203ENST00000435891 COL17A1Q9UMD9 1497 aaPredicted RBP14□□□□□ -0.17
CLSTN1-203ENST00000435891 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
CLSTN1-203ENST00000435891 ZBTB4Q9P1Z0 1013 aaPredicted RBP14□□□□□ -0.17
CLSTN1-203ENST00000435891 KTN1Q86UP2 1357 aaKnown RBP13.99□□□□□ -0.17
CLSTN1-203ENST00000435891 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
CLSTN1-203ENST00000435891 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
CLSTN1-203ENST00000435891 PANK3Q9H999 370 aa13.99□□□□□ -0.17
CLSTN1-203ENST00000435891 ATP10AO60312 1499 aa13.98□□□□□ -0.17
CLSTN1-203ENST00000435891 ABCC1P33527 1531 aa13.98□□□□□ -0.17
CLSTN1-203ENST00000435891 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
CLSTN1-203ENST00000435891 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
CLSTN1-203ENST00000435891 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
CLSTN1-203ENST00000435891 LAMC1P11047 1609 aa13.94□□□□□ -0.18
CLSTN1-203ENST00000435891 TMF1P82094 1093 aa13.93□□□□□ -0.18
CLSTN1-203ENST00000435891 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
CLSTN1-203ENST00000435891 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
CLSTN1-203ENST00000435891 EIF2AK4Q9P2K8 1649 aaKnown RBP13.92□□□□□ -0.18
CLSTN1-203ENST00000435891 RRP1P56182 461 aaKnown RBP13.91□□□□□ -0.18
CLSTN1-203ENST00000435891 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
CLSTN1-203ENST00000435891 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
CLSTN1-203ENST00000435891 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
CLSTN1-203ENST00000435891 EXOC6Q8TAG9 804 aa13.9□□□□□ -0.18
CLSTN1-203ENST00000435891 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
CLSTN1-203ENST00000435891 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
CLSTN1-203ENST00000435891 WDR7Q9Y4E6 1490 aa13.89□□□□□ -0.19
CLSTN1-203ENST00000435891 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
CLSTN1-203ENST00000435891 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
CLSTN1-203ENST00000435891 CLTCL1P53675 1640 aa13.87□□□□□ -0.19
CLSTN1-203ENST00000435891 TRPM2O94759 1503 aa13.87□□□□□ -0.19
CLSTN1-203ENST00000435891 KIF3BO15066 747 aa13.87□□□□□ -0.19
CLSTN1-203ENST00000435891 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
CLSTN1-203ENST00000435891 PTPRTO14522 1441 aa13.86□□□□□ -0.19
CLSTN1-203ENST00000435891 PLIN1O60240 522 aa13.86□□□□□ -0.19
CLSTN1-203ENST00000435891 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
CLSTN1-203ENST00000435891 BLMP54132 1417 aaPredicted RBP13.85□□□□□ -0.19
CLSTN1-203ENST00000435891 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
CLSTN1-203ENST00000435891 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
CLSTN1-203ENST00000435891 FANCAO15360 1455 aa13.85□□□□□ -0.19
CLSTN1-203ENST00000435891 SPHKAPQ2M3C7 1700 aa13.85□□□□□ -0.19
CLSTN1-203ENST00000435891 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
CLSTN1-203ENST00000435891 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-203ENST00000435891 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
CLSTN1-203ENST00000435891 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
CLSTN1-203ENST00000435891 CEP152O94986 1710 aa13.83□□□□□ -0.2
CLSTN1-203ENST00000435891 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
CLSTN1-203ENST00000435891 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms