RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
HOXD3-203ENST00000432796 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
HOXD3-203ENST00000432796 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
HOXD3-203ENST00000432796 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
HOXD3-203ENST00000432796 PZPP20742 1482 aa16.86■□□□□ 0.29
HOXD3-203ENST00000432796 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
HOXD3-203ENST00000432796 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
HOXD3-203ENST00000432796 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
HOXD3-203ENST00000432796 NLRP1Q9C000 1473 aa16.85■□□□□ 0.29
HOXD3-203ENST00000432796 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
HOXD3-203ENST00000432796 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
HOXD3-203ENST00000432796 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
HOXD3-203ENST00000432796 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.28
HOXD3-203ENST00000432796 IQGAP1P46940 1657 aa16.82■□□□□ 0.28
HOXD3-203ENST00000432796 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
HOXD3-203ENST00000432796 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
HOXD3-203ENST00000432796 FAM135BQ49AJ0 1406 aa16.81■□□□□ 0.28
HOXD3-203ENST00000432796 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
HOXD3-203ENST00000432796 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
HOXD3-203ENST00000432796 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
HOXD3-203ENST00000432796 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
HOXD3-203ENST00000432796 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
HOXD3-203ENST00000432796 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
HOXD3-203ENST00000432796 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.28
HOXD3-203ENST00000432796 UPF1Q92900 1129 aaKnown RBP eCLIP16.77■□□□□ 0.28
HOXD3-203ENST00000432796 CFDP1Q9UEE9 299 aaPredicted RBP16.77■□□□□ 0.28
HOXD3-203ENST00000432796 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
HOXD3-203ENST00000432796 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
HOXD3-203ENST00000432796 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
HOXD3-203ENST00000432796 KIF3BO15066 747 aa16.73■□□□□ 0.27
HOXD3-203ENST00000432796 ZC3H13Q5T200 1668 aaKnown RBP16.7■□□□□ 0.26
HOXD3-203ENST00000432796 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
HOXD3-203ENST00000432796 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
HOXD3-203ENST00000432796 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
HOXD3-203ENST00000432796 SCAF11Q99590 1463 aaKnown RBP16.68■□□□□ 0.26
HOXD3-203ENST00000432796 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
HOXD3-203ENST00000432796 JCADQ9P266 1359 aa16.65■□□□□ 0.26
HOXD3-203ENST00000432796 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
HOXD3-203ENST00000432796 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
HOXD3-203ENST00000432796 TMEM94Q12767 1356 aa16.64■□□□□ 0.26
HOXD3-203ENST00000432796 XIRP1Q702N8 1843 aaKnown RBP16.64■□□□□ 0.25
HOXD3-203ENST00000432796 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
HOXD3-203ENST00000432796 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
HOXD3-203ENST00000432796 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
HOXD3-203ENST00000432796 LTKP29376 864 aa16.62■□□□□ 0.25
HOXD3-203ENST00000432796 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
HOXD3-203ENST00000432796 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
HOXD3-203ENST00000432796 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
HOXD3-203ENST00000432796 SLIT1O75093 1534 aa16.6■□□□□ 0.25
HOXD3-203ENST00000432796 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
HOXD3-203ENST00000432796 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
HOXD3-203ENST00000432796 ABCC3O15438 1527 aa16.58■□□□□ 0.24
HOXD3-203ENST00000432796 UBR1Q8IWV7 1749 aa16.57■□□□□ 0.24
HOXD3-203ENST00000432796 LRP6O75581 1613 aa16.57■□□□□ 0.24
HOXD3-203ENST00000432796 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
HOXD3-203ENST00000432796 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
HOXD3-203ENST00000432796 EID1Q9Y6B2 187 aa16.57■□□□□ 0.24
HOXD3-203ENST00000432796 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
HOXD3-203ENST00000432796 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
HOXD3-203ENST00000432796 KCNA6P17658 529 aa16.56■□□□□ 0.24
HOXD3-203ENST00000432796 RXRBP28702 533 aa16.55■□□□□ 0.24
HOXD3-203ENST00000432796 MEX3CQ5U5Q3 659 aaKnown RBP16.55■□□□□ 0.24
HOXD3-203ENST00000432796 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
HOXD3-203ENST00000432796 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
HOXD3-203ENST00000432796 PROSER2Q86WR7 435 aaPredicted RBP16.54■□□□□ 0.24
HOXD3-203ENST00000432796 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
HOXD3-203ENST00000432796 RSPH4AQ5TD94 716 aa16.53■□□□□ 0.24
HOXD3-203ENST00000432796 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
HOXD3-203ENST00000432796 SLAIN2Q9P270 581 aa16.53■□□□□ 0.24
HOXD3-203ENST00000432796 PRDM15P57071 1507 aaPredicted RBP16.53■□□□□ 0.24
HOXD3-203ENST00000432796 MSH6P52701 1360 aa16.52■□□□□ 0.24
HOXD3-203ENST00000432796 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
HOXD3-203ENST00000432796 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
HOXD3-203ENST00000432796 TMEM2Q9UHN6 1383 aa16.51■□□□□ 0.23
HOXD3-203ENST00000432796 CAMSAP2Q08AD1 1489 aa16.49■□□□□ 0.23
HOXD3-203ENST00000432796 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
HOXD3-203ENST00000432796 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
HOXD3-203ENST00000432796 NWD1Q149M9 1564 aa16.46■□□□□ 0.23
HOXD3-203ENST00000432796 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
HOXD3-203ENST00000432796 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
HOXD3-203ENST00000432796 EHBP1L1Q8N3D4 1523 aa16.45■□□□□ 0.22
HOXD3-203ENST00000432796 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
HOXD3-203ENST00000432796 ARHGAP31Q2M1Z3 1444 aa16.44■□□□□ 0.22
HOXD3-203ENST00000432796 TET3O43151 1660 aa16.43■□□□□ 0.22
HOXD3-203ENST00000432796 RGS12O14924 1447 aa16.43■□□□□ 0.22
HOXD3-203ENST00000432796 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
HOXD3-203ENST00000432796 ARHGEF5Q12774 1597 aa16.42■□□□□ 0.22
HOXD3-203ENST00000432796 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
HOXD3-203ENST00000432796 FOXD1Q16676 465 aa16.41■□□□□ 0.22
HOXD3-203ENST00000432796 AFF2P51816 1311 aa16.41■□□□□ 0.22
HOXD3-203ENST00000432796 AHDC1Q5TGY3 1603 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-203ENST00000432796 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
HOXD3-203ENST00000432796 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
HOXD3-203ENST00000432796 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
HOXD3-203ENST00000432796 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
HOXD3-203ENST00000432796 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
HOXD3-203ENST00000432796 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
HOXD3-203ENST00000432796 CEP152O94986 1710 aa16.37■□□□□ 0.21
HOXD3-203ENST00000432796 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
HOXD3-203ENST00000432796 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms