RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 EIF4G2P78344 907 aaKnown RBP eCLIP27.64■■■□□ 2.01
VRK2-205ENST00000432057 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
VRK2-205ENST00000432057 E9PCH4 1651 aa27.62■■■□□ 2.01
VRK2-205ENST00000432057 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
VRK2-205ENST00000432057 ZNF518AQ6AHZ1 1483 aa27.6■■■□□ 2.01
VRK2-205ENST00000432057 CCDC144AA2RUR9 1427 aa27.59■■■□□ 2.01
VRK2-205ENST00000432057 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2.01
VRK2-205ENST00000432057 KDM5CP41229 1560 aa27.58■■■□□ 2.01
VRK2-205ENST00000432057 TET3O43151 1660 aa27.56■■■□□ 2
VRK2-205ENST00000432057 MAP3K4Q9Y6R4 1608 aa27.56■■■□□ 2
VRK2-205ENST00000432057 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
VRK2-205ENST00000432057 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
VRK2-205ENST00000432057 POGZQ7Z3K3 1410 aa27.55■■■□□ 2
VRK2-205ENST00000432057 MROH1Q8NDA8 1641 aa27.55■■■□□ 2
VRK2-205ENST00000432057 RALGAPBQ86X10 1494 aa27.54■■■□□ 2
VRK2-205ENST00000432057 SPHKAPQ2M3C7 1700 aa27.54■■■□□ 2
VRK2-205ENST00000432057 ATP10AO60312 1499 aa27.54■■■□□ 2
VRK2-205ENST00000432057 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
VRK2-205ENST00000432057 VWDEQ8N2E2 1590 aa27.53■■■□□ 2
VRK2-205ENST00000432057 HECW2Q9P2P5 1572 aa27.53■■■□□ 2
VRK2-205ENST00000432057 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
VRK2-205ENST00000432057 WASHC2AQ641Q2 1341 aa27.52■■■□□ 2
VRK2-205ENST00000432057 DHX29Q7Z478 1369 aaKnown RBP27.5■■□□□ 1.99
VRK2-205ENST00000432057 NEO1Q92859 1461 aa27.49■■□□□ 1.99
VRK2-205ENST00000432057 CEP152O94986 1710 aa27.48■■□□□ 1.99
VRK2-205ENST00000432057 TRPM1Q7Z4N2 1603 aa27.48■■□□□ 1.99
VRK2-205ENST00000432057 ABCA6Q8N139 1617 aa27.47■■□□□ 1.99
VRK2-205ENST00000432057 TRPM2O94759 1503 aa27.46■■□□□ 1.99
VRK2-205ENST00000432057 DCAF11Q8TEB1 546 aa27.46■■□□□ 1.99
VRK2-205ENST00000432057 GLI2P10070 1586 aa27.46■■□□□ 1.99
VRK2-205ENST00000432057 BCORL1Q5H9F3 1711 aa27.46■■□□□ 1.99
VRK2-205ENST00000432057 A2MP01023 1474 aa27.46■■□□□ 1.99
VRK2-205ENST00000432057 RNF17Q9BXT8 1623 aaKnown RBP27.46■■□□□ 1.99
VRK2-205ENST00000432057 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.99
VRK2-205ENST00000432057 MLH3Q9UHC1 1453 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 RICTORQ6R327 1708 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 KIF3BO15066 747 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 FRMPD1Q5SYB0 1578 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 KANK1Q14678 1352 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 USP47Q96K76 1375 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 CCDC7Q96M83 1385 aa27.44■■□□□ 1.98
VRK2-205ENST00000432057 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
VRK2-205ENST00000432057 C11orf95C9JLR9 678 aaPredicted RBP27.42■■□□□ 1.98
VRK2-205ENST00000432057 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
VRK2-205ENST00000432057 PRAG1Q86YV5 1406 aa27.4■■□□□ 1.98
VRK2-205ENST00000432057 DIP2BQ9P265 1576 aa27.4■■□□□ 1.98
VRK2-205ENST00000432057 ANP32CO43423 234 aa27.4■■□□□ 1.98
VRK2-205ENST00000432057 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
VRK2-205ENST00000432057 CNTLNQ9NXG0 1405 aa27.39■■□□□ 1.97
VRK2-205ENST00000432057 RGL3Q3MIN7 710 aa27.38■■□□□ 1.97
VRK2-205ENST00000432057 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
VRK2-205ENST00000432057 PTPRTO14522 1441 aa27.37■■□□□ 1.97
VRK2-205ENST00000432057 TSPOAP1O95153 1857 aa27.35■■□□□ 1.97
VRK2-205ENST00000432057 DIP2CQ9Y2E4 1556 aa27.34■■□□□ 1.97
VRK2-205ENST00000432057 KIF7Q2M1P5 1343 aa27.34■■□□□ 1.97
VRK2-205ENST00000432057 CARD11Q9BXL7 1154 aa27.33■■□□□ 1.97
VRK2-205ENST00000432057 LAMC1P11047 1609 aa27.32■■□□□ 1.96
VRK2-205ENST00000432057 LMTK2Q8IWU2 1503 aa27.31■■□□□ 1.96
VRK2-205ENST00000432057 ROCK2O75116 1388 aaKnown RBP27.3■■□□□ 1.96
VRK2-205ENST00000432057 RAPGEF3O95398 923 aa27.3■■□□□ 1.96
VRK2-205ENST00000432057 CCER2I3L3R5 266 aa27.29■■□□□ 1.96
VRK2-205ENST00000432057 KIF1BO60333 1816 aa27.29■■□□□ 1.96
VRK2-205ENST00000432057 MADDQ8WXG6 1647 aa27.28■■□□□ 1.96
VRK2-205ENST00000432057 UGGT1Q9NYU2 1555 aa27.26■■□□□ 1.95
VRK2-205ENST00000432057 FAM69CQ0P6D2 419 aa27.25■■□□□ 1.95
VRK2-205ENST00000432057 CFAP65Q6ZU64 1925 aaKnown RBP27.25■■□□□ 1.95
VRK2-205ENST00000432057 MROH2AA6NES4 1674 aa27.23■■□□□ 1.95
VRK2-205ENST00000432057 GPRASP1Q5JY77 1395 aa27.22■■□□□ 1.95
VRK2-205ENST00000432057 CAMSAP1Q5T5Y3 1602 aa27.22■■□□□ 1.95
VRK2-205ENST00000432057 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
VRK2-205ENST00000432057 KIF13AQ9H1H9 1805 aa27.21■■□□□ 1.95
VRK2-205ENST00000432057 ABCC3O15438 1527 aa27.2■■□□□ 1.94
VRK2-205ENST00000432057 IFT172Q9UG01 1749 aa27.2■■□□□ 1.94
VRK2-205ENST00000432057 ZMYM4Q5VZL5 1548 aa27.19■■□□□ 1.94
VRK2-205ENST00000432057 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
VRK2-205ENST00000432057 GTF3C3Q9Y5Q9 886 aa27.19■■□□□ 1.94
VRK2-205ENST00000432057 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
VRK2-205ENST00000432057 ST20-MTHFSA0A0A6YYL1 179 aa27.17■■□□□ 1.94
VRK2-205ENST00000432057 GGT6Q6P531 493 aa27.15■■□□□ 1.94
VRK2-205ENST00000432057 ARID4BQ4LE39 1312 aaPredicted RBP27.15■■□□□ 1.94
VRK2-205ENST00000432057 IQGAP1P46940 1657 aa27.14■■□□□ 1.94
VRK2-205ENST00000432057 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.94
VRK2-205ENST00000432057 SIGLEC1Q9BZZ2 1709 aa27.14■■□□□ 1.94
VRK2-205ENST00000432057 NPATQ14207 1427 aa27.14■■□□□ 1.93
VRK2-205ENST00000432057 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
VRK2-205ENST00000432057 KIAA1210Q9ULL0 1709 aa27.11■■□□□ 1.93
VRK2-205ENST00000432057 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
VRK2-205ENST00000432057 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
VRK2-205ENST00000432057 PRKRIP1Q9H875 184 aaPredicted RBP27.06■■□□□ 1.92
VRK2-205ENST00000432057 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
VRK2-205ENST00000432057 MYOM2P54296 1465 aa27.06■■□□□ 1.92
VRK2-205ENST00000432057 PPLO60437 1756 aa27.05■■□□□ 1.92
VRK2-205ENST00000432057 COL17A1Q9UMD9 1497 aaPredicted RBP27.03■■□□□ 1.92
VRK2-205ENST00000432057 PIK3C2BO00750 1634 aa27.02■■□□□ 1.92
VRK2-205ENST00000432057 STAC3Q96MF2 364 aa27.02■■□□□ 1.92
VRK2-205ENST00000432057 SYNMO15061 1565 aa27.02■■□□□ 1.92
VRK2-205ENST00000432057 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
VRK2-205ENST00000432057 NOS1P29475 1434 aa26.98■■□□□ 1.91
VRK2-205ENST00000432057 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
VRK2-205ENST00000432057 DISP3Q9P2K9 1392 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms