RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
CSTF3-202ENST00000431742 FAM135AQ9P2D6 1515 aa21.87■■□□□ 1.09
CSTF3-202ENST00000431742 MROH2AA6NES4 1674 aa21.87■■□□□ 1.09
CSTF3-202ENST00000431742 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
CSTF3-202ENST00000431742 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
CSTF3-202ENST00000431742 ANKRD50Q9ULJ7 1429 aa21.85■■□□□ 1.09
CSTF3-202ENST00000431742 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
CSTF3-202ENST00000431742 UNC13BO14795 1591 aa21.84■■□□□ 1.09
CSTF3-202ENST00000431742 HFM1A2PYH4 1435 aa21.82■■□□□ 1.08
CSTF3-202ENST00000431742 NAIPQ13075 1403 aa21.82■■□□□ 1.08
CSTF3-202ENST00000431742 KIF3BO15066 747 aa21.82■■□□□ 1.08
CSTF3-202ENST00000431742 MLECQ14165 292 aa21.82■■□□□ 1.08
CSTF3-202ENST00000431742 CEP152O94986 1710 aa21.82■■□□□ 1.08
CSTF3-202ENST00000431742 KDM5DQ9BY66 1539 aa21.8■■□□□ 1.08
CSTF3-202ENST00000431742 C3P01024 1663 aa21.8■■□□□ 1.08
CSTF3-202ENST00000431742 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
CSTF3-202ENST00000431742 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
CSTF3-202ENST00000431742 PTPRMP28827 1452 aa21.78■■□□□ 1.08
CSTF3-202ENST00000431742 ABCC3O15438 1527 aa21.77■■□□□ 1.08
CSTF3-202ENST00000431742 GGT6Q6P531 493 aa21.76■■□□□ 1.07
CSTF3-202ENST00000431742 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
CSTF3-202ENST00000431742 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
CSTF3-202ENST00000431742 IQGAP3Q86VI3 1631 aa21.74■■□□□ 1.07
CSTF3-202ENST00000431742 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
CSTF3-202ENST00000431742 TET3O43151 1660 aa21.69■■□□□ 1.06
CSTF3-202ENST00000431742 FOXD1Q16676 465 aa21.68■■□□□ 1.06
CSTF3-202ENST00000431742 EFCAB6Q5THR3 1501 aa21.67■■□□□ 1.06
CSTF3-202ENST00000431742 KANK1Q14678 1352 aa21.66■■□□□ 1.06
CSTF3-202ENST00000431742 ESF1Q9H501 851 aaKnown RBP21.66■■□□□ 1.06
CSTF3-202ENST00000431742 PZPP20742 1482 aa21.65■■□□□ 1.06
CSTF3-202ENST00000431742 ZMYM3Q14202 1370 aa21.65■■□□□ 1.06
CSTF3-202ENST00000431742 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
CSTF3-202ENST00000431742 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.06
CSTF3-202ENST00000431742 PREX1Q8TCU6 1659 aa21.63■■□□□ 1.05
CSTF3-202ENST00000431742 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
CSTF3-202ENST00000431742 ARHGAP31Q2M1Z3 1444 aa21.63■■□□□ 1.05
CSTF3-202ENST00000431742 E9PCH4 1651 aa21.63■■□□□ 1.05
CSTF3-202ENST00000431742 CFAP65Q6ZU64 1925 aaKnown RBP21.63■■□□□ 1.05
CSTF3-202ENST00000431742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.058e-9■■■□□ 14.6
CSTF3-202ENST00000431742 NPATQ14207 1427 aa21.62■■□□□ 1.05
CSTF3-202ENST00000431742 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
CSTF3-202ENST00000431742 CEBPAP49715 358 aaPredicted RBP21.59■■□□□ 1.05
CSTF3-202ENST00000431742 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
CSTF3-202ENST00000431742 NUP155O75694 1391 aa21.59■■□□□ 1.05
CSTF3-202ENST00000431742 MYO3AQ8NEV4 1616 aa21.58■■□□□ 1.05
CSTF3-202ENST00000431742 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.04
CSTF3-202ENST00000431742 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
CSTF3-202ENST00000431742 RPRD2Q5VT52 1461 aaKnown RBP21.57■■□□□ 1.04
CSTF3-202ENST00000431742 ZNF142P52746 1687 aaPredicted RBP21.56■■□□□ 1.04
CSTF3-202ENST00000431742 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.04
CSTF3-202ENST00000431742 SYNMO15061 1565 aa21.52■■□□□ 1.04
CSTF3-202ENST00000431742 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
CSTF3-202ENST00000431742 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
CSTF3-202ENST00000431742 NOS1P29475 1434 aa21.5■■□□□ 1.03
CSTF3-202ENST00000431742 LMTK3Q96Q04 1460 aa21.5■■□□□ 1.03
CSTF3-202ENST00000431742 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
CSTF3-202ENST00000431742 TNRQ92752 1358 aa21.48■■□□□ 1.03
CSTF3-202ENST00000431742 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
CSTF3-202ENST00000431742 HRCP23327 699 aa21.48■■□□□ 1.03
CSTF3-202ENST00000431742 PIK3C2BO00750 1634 aa21.47■■□□□ 1.03
CSTF3-202ENST00000431742 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
CSTF3-202ENST00000431742 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
CSTF3-202ENST00000431742 NLRP1Q9C000 1473 aa21.45■■□□□ 1.03
CSTF3-202ENST00000431742 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
CSTF3-202ENST00000431742 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
CSTF3-202ENST00000431742 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
CSTF3-202ENST00000431742 PTPRTO14522 1441 aa21.42■■□□□ 1.02
CSTF3-202ENST00000431742 TRPM2O94759 1503 aa21.42■■□□□ 1.02
CSTF3-202ENST00000431742 SLC4A1APQ9BWU0 796 aaKnown RBP21.4■■□□□ 1.02
CSTF3-202ENST00000431742 UGGT1Q9NYU2 1555 aa21.4■■□□□ 1.02
CSTF3-202ENST00000431742 MYO5BQ9ULV0 1848 aa21.39■■□□□ 1.02
CSTF3-202ENST00000431742 MPHOSPH9Q99550 1183 aa21.38■■□□□ 1.01
CSTF3-202ENST00000431742 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
CSTF3-202ENST00000431742 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
CSTF3-202ENST00000431742 PKD2Q13563 968 aa21.37■■□□□ 1.01
CSTF3-202ENST00000431742 ADGRB3O60242 1522 aa21.36■■□□□ 1.01
CSTF3-202ENST00000431742 TMEM131LA2VDJ0 1609 aa21.35■■□□□ 1.01
CSTF3-202ENST00000431742 KIF1BO60333 1816 aa21.34■■□□□ 1.01
CSTF3-202ENST00000431742 STRCQ7RTU9 1775 aa21.33■■□□□ 1
CSTF3-202ENST00000431742 POLR1AO95602 1720 aaPredicted RBP21.32■■□□□ 1
CSTF3-202ENST00000431742 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
CSTF3-202ENST00000431742 IDI1Q13907 227 aa21.3■■□□□ 1
CSTF3-202ENST00000431742 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
CSTF3-202ENST00000431742 SLIT1O75093 1534 aa21.28■■□□□ 1
CSTF3-202ENST00000431742 HSPA2P54652 639 aa21.27■■□□□ 1
CSTF3-202ENST00000431742 ARHGAP23Q9P227 1491 aa21.26■□□□□ 0.99
CSTF3-202ENST00000431742 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
CSTF3-202ENST00000431742 NEURL4Q96JN8 1562 aa21.23■□□□□ 0.99
CSTF3-202ENST00000431742 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
CSTF3-202ENST00000431742 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
CSTF3-202ENST00000431742 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
CSTF3-202ENST00000431742 IFT172Q9UG01 1749 aa21.21■□□□□ 0.99
CSTF3-202ENST00000431742 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
CSTF3-202ENST00000431742 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
CSTF3-202ENST00000431742 PPLO60437 1756 aa21.18■□□□□ 0.98
CSTF3-202ENST00000431742 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
CSTF3-202ENST00000431742 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
CSTF3-202ENST00000431742 IQGAP1P46940 1657 aa21.17■□□□□ 0.98
CSTF3-202ENST00000431742 MED14O60244 1454 aa21.16■□□□□ 0.98
CSTF3-202ENST00000431742 SCAF11Q99590 1463 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms