RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
ATG4B-212ENST00000430617 MED14O60244 1454 aa16.62■□□□□ 0.25
ATG4B-212ENST00000430617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.255e-9■■■■□ 24.7
ATG4B-212ENST00000430617 EEA1Q15075 1411 aa16.62■□□□□ 0.25
ATG4B-212ENST00000430617 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■■■□ 21.8
ATG4B-212ENST00000430617 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-212ENST00000430617 ZC3H13Q5T200 1668 aaKnown RBP16.61■□□□□ 0.25
ATG4B-212ENST00000430617 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-212ENST00000430617 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-212ENST00000430617 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
ATG4B-212ENST00000430617 TNRQ92752 1358 aa16.58■□□□□ 0.24
ATG4B-212ENST00000430617 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
ATG4B-212ENST00000430617 CFAP65Q6ZU64 1925 aaKnown RBP16.57■□□□□ 0.24
ATG4B-212ENST00000430617 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
ATG4B-212ENST00000430617 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
ATG4B-212ENST00000430617 PZPP20742 1482 aa16.54■□□□□ 0.24
ATG4B-212ENST00000430617 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
ATG4B-212ENST00000430617 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.23
ATG4B-212ENST00000430617 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
ATG4B-212ENST00000430617 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
ATG4B-212ENST00000430617 THEMISQ8N1K5 641 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-212ENST00000430617 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
ATG4B-212ENST00000430617 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
ATG4B-212ENST00000430617 UBR1Q8IWV7 1749 aa16.49■□□□□ 0.23
ATG4B-212ENST00000430617 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
ATG4B-212ENST00000430617 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
ATG4B-212ENST00000430617 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
ATG4B-212ENST00000430617 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
ATG4B-212ENST00000430617 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
ATG4B-212ENST00000430617 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
ATG4B-212ENST00000430617 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATG4B-212ENST00000430617 PHLPP1O60346 1717 aa16.44■□□□□ 0.22
ATG4B-212ENST00000430617 DHX29Q7Z478 1369 aaKnown RBP16.43■□□□□ 0.22
ATG4B-212ENST00000430617 KIF3BO15066 747 aa16.42■□□□□ 0.22
ATG4B-212ENST00000430617 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-212ENST00000430617 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-212ENST00000430617 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
ATG4B-212ENST00000430617 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
ATG4B-212ENST00000430617 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
ATG4B-212ENST00000430617 CEP152O94986 1710 aa16.39■□□□□ 0.21
ATG4B-212ENST00000430617 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
ATG4B-212ENST00000430617 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
ATG4B-212ENST00000430617 SCAF11Q99590 1463 aaKnown RBP16.37■□□□□ 0.21
ATG4B-212ENST00000430617 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
ATG4B-212ENST00000430617 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
ATG4B-212ENST00000430617 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
ATG4B-212ENST00000430617 LTKP29376 864 aa16.34■□□□□ 0.21
ATG4B-212ENST00000430617 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
ATG4B-212ENST00000430617 ABCC3O15438 1527 aa16.34■□□□□ 0.21
ATG4B-212ENST00000430617 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.2
ATG4B-212ENST00000430617 SLIT1O75093 1534 aa16.33■□□□□ 0.2
ATG4B-212ENST00000430617 LRP6O75581 1613 aa16.33■□□□□ 0.2
ATG4B-212ENST00000430617 COL16A1Q07092 1604 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-212ENST00000430617 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
ATG4B-212ENST00000430617 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
ATG4B-212ENST00000430617 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
ATG4B-212ENST00000430617 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
ATG4B-212ENST00000430617 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
ATG4B-212ENST00000430617 JCADQ9P266 1359 aa16.28■□□□□ 0.2
ATG4B-212ENST00000430617 TXNDC2Q86VQ3 553 aa16.28■□□□□ 0.2
ATG4B-212ENST00000430617 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
ATG4B-212ENST00000430617 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
ATG4B-212ENST00000430617 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
ATG4B-212ENST00000430617 EIF2AK4Q9P2K8 1649 aaKnown RBP16.24■□□□□ 0.19
ATG4B-212ENST00000430617 PRDM15P57071 1507 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-212ENST00000430617 TET3O43151 1660 aa16.24■□□□□ 0.19
ATG4B-212ENST00000430617 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
ATG4B-212ENST00000430617 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
ATG4B-212ENST00000430617 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
ATG4B-212ENST00000430617 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
ATG4B-212ENST00000430617 KDM5AP29375 1690 aaKnown RBP16.22■□□□□ 0.19
ATG4B-212ENST00000430617 ZNF772Q68DY9 489 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-212ENST00000430617 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-212ENST00000430617 KCNA6P17658 529 aa16.2■□□□□ 0.18
ATG4B-212ENST00000430617 SLAIN2Q9P270 581 aa16.2■□□□□ 0.18
ATG4B-212ENST00000430617 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
ATG4B-212ENST00000430617 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
ATG4B-212ENST00000430617 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-212ENST00000430617 RXRBP28702 533 aa16.19■□□□□ 0.18
ATG4B-212ENST00000430617 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
ATG4B-212ENST00000430617 MYO5BQ9ULV0 1848 aa16.18■□□□□ 0.18
ATG4B-212ENST00000430617 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
ATG4B-212ENST00000430617 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
ATG4B-212ENST00000430617 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
ATG4B-212ENST00000430617 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
ATG4B-212ENST00000430617 SPATA31A6Q5VVP1 1343 aa16.17■□□□□ 0.18
ATG4B-212ENST00000430617 MSH6P52701 1360 aa16.16■□□□□ 0.18
ATG4B-212ENST00000430617 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
ATG4B-212ENST00000430617 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-212ENST00000430617 DIP2AQ14689 1571 aa16.15■□□□□ 0.18
ATG4B-212ENST00000430617 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
ATG4B-212ENST00000430617 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-212ENST00000430617 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
ATG4B-212ENST00000430617 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
ATG4B-212ENST00000430617 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
ATG4B-212ENST00000430617 RGS12O14924 1447 aa16.13■□□□□ 0.17
ATG4B-212ENST00000430617 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
ATG4B-212ENST00000430617 EP400Q96L91 3159 aa16.12■□□□□ 0.17
ATG4B-212ENST00000430617 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
ATG4B-212ENST00000430617 AFF2P51816 1311 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms