RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 A2MP01023 1474 aa17.82■□□□□ 0.44
RFC4-206ENST00000427785 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
RFC4-206ENST00000427785 CEP152O94986 1710 aa17.81■□□□□ 0.44
RFC4-206ENST00000427785 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
RFC4-206ENST00000427785 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
RFC4-206ENST00000427785 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
RFC4-206ENST00000427785 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
RFC4-206ENST00000427785 NUP155O75694 1391 aa17.75■□□□□ 0.43
RFC4-206ENST00000427785 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
RFC4-206ENST00000427785 TET3O43151 1660 aa17.74■□□□□ 0.43
RFC4-206ENST00000427785 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
RFC4-206ENST00000427785 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
RFC4-206ENST00000427785 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
RFC4-206ENST00000427785 E9PCH4 1651 aa17.73■□□□□ 0.43
RFC4-206ENST00000427785 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
RFC4-206ENST00000427785 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
RFC4-206ENST00000427785 ATP10AO60312 1499 aa17.7■□□□□ 0.42
RFC4-206ENST00000427785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.425e-8■■□□□ 12.5
RFC4-206ENST00000427785 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
RFC4-206ENST00000427785 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
RFC4-206ENST00000427785 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
RFC4-206ENST00000427785 KIF3BO15066 747 aa17.68■□□□□ 0.42
RFC4-206ENST00000427785 FOXD1Q16676 465 aa17.68■□□□□ 0.42
RFC4-206ENST00000427785 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
RFC4-206ENST00000427785 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
RFC4-206ENST00000427785 EFCAB6Q5THR3 1501 aa17.66■□□□□ 0.42
RFC4-206ENST00000427785 AGLP35573 1532 aa17.65■□□□□ 0.42
RFC4-206ENST00000427785 ABCC3O15438 1527 aa17.64■□□□□ 0.41
RFC4-206ENST00000427785 PKD2Q13563 968 aa17.64■□□□□ 0.41
RFC4-206ENST00000427785 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.41
RFC4-206ENST00000427785 KANK1Q14678 1352 aa17.64■□□□□ 0.41
RFC4-206ENST00000427785 LMTK2Q8IWU2 1503 aa17.62■□□□□ 0.41
RFC4-206ENST00000427785 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
RFC4-206ENST00000427785 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
RFC4-206ENST00000427785 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
RFC4-206ENST00000427785 RPRD2Q5VT52 1461 aaKnown RBP17.57■□□□□ 0.4
RFC4-206ENST00000427785 GGT6Q6P531 493 aa17.57■□□□□ 0.4
RFC4-206ENST00000427785 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
RFC4-206ENST00000427785 TRPM2O94759 1503 aa17.57■□□□□ 0.4
RFC4-206ENST00000427785 PLA2R1Q13018 1463 aa17.55■□□□□ 0.4
RFC4-206ENST00000427785 PREX1Q8TCU6 1659 aa17.55■□□□□ 0.4
RFC4-206ENST00000427785 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
RFC4-206ENST00000427785 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
RFC4-206ENST00000427785 KIF1BO60333 1816 aa17.52■□□□□ 0.4
RFC4-206ENST00000427785 MROH2AA6NES4 1674 aa17.52■□□□□ 0.39
RFC4-206ENST00000427785 NPATQ14207 1427 aa17.51■□□□□ 0.39
RFC4-206ENST00000427785 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
RFC4-206ENST00000427785 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
RFC4-206ENST00000427785 SYNMO15061 1565 aa17.49■□□□□ 0.39
RFC4-206ENST00000427785 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
RFC4-206ENST00000427785 PTPRTO14522 1441 aa17.48■□□□□ 0.39
RFC4-206ENST00000427785 MLECQ14165 292 aa17.48■□□□□ 0.39
RFC4-206ENST00000427785 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
RFC4-206ENST00000427785 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
RFC4-206ENST00000427785 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
RFC4-206ENST00000427785 ARHGAP31Q2M1Z3 1444 aa17.45■□□□□ 0.38
RFC4-206ENST00000427785 IFT172Q9UG01 1749 aa17.43■□□□□ 0.38
RFC4-206ENST00000427785 C3P01024 1663 aa17.42■□□□□ 0.38
RFC4-206ENST00000427785 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
RFC4-206ENST00000427785 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
RFC4-206ENST00000427785 MADDQ8WXG6 1647 aa17.42■□□□□ 0.38
RFC4-206ENST00000427785 ERVK-7P63135 1459 aa17.42■□□□□ 0.38
RFC4-206ENST00000427785 NOS1P29475 1434 aa17.41■□□□□ 0.38
RFC4-206ENST00000427785 ADGRB3O60242 1522 aa17.41■□□□□ 0.38
RFC4-206ENST00000427785 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
RFC4-206ENST00000427785 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
RFC4-206ENST00000427785 L3MBTL2Q969R5 705 aa17.39■□□□□ 0.37
RFC4-206ENST00000427785 NEURL4Q96JN8 1562 aa17.38■□□□□ 0.37
RFC4-206ENST00000427785 ADAMTSL3P82987 1691 aa17.38■□□□□ 0.37
RFC4-206ENST00000427785 PPLO60437 1756 aa17.38■□□□□ 0.37
RFC4-206ENST00000427785 SPATA31E1Q6ZUB1 1445 aa17.38■□□□□ 0.37
RFC4-206ENST00000427785 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
RFC4-206ENST00000427785 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
RFC4-206ENST00000427785 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.37
RFC4-206ENST00000427785 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
RFC4-206ENST00000427785 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
RFC4-206ENST00000427785 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
RFC4-206ENST00000427785 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
RFC4-206ENST00000427785 RGL3Q3MIN7 710 aa17.3■□□□□ 0.36
RFC4-206ENST00000427785 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
RFC4-206ENST00000427785 MYO3AQ8NEV4 1616 aa17.29■□□□□ 0.36
RFC4-206ENST00000427785 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
RFC4-206ENST00000427785 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
RFC4-206ENST00000427785 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
RFC4-206ENST00000427785 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
RFC4-206ENST00000427785 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.35
RFC4-206ENST00000427785 UBR1Q8IWV7 1749 aa17.27■□□□□ 0.35
RFC4-206ENST00000427785 MYOM2P54296 1465 aa17.26■□□□□ 0.35
RFC4-206ENST00000427785 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
RFC4-206ENST00000427785 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
RFC4-206ENST00000427785 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
RFC4-206ENST00000427785 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
RFC4-206ENST00000427785 TNRQ92752 1358 aa17.25■□□□□ 0.35
RFC4-206ENST00000427785 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
RFC4-206ENST00000427785 LAMC1P11047 1609 aa17.23■□□□□ 0.35
RFC4-206ENST00000427785 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
RFC4-206ENST00000427785 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
RFC4-206ENST00000427785 IDI1Q13907 227 aa17.21■□□□□ 0.35
RFC4-206ENST00000427785 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
RFC4-206ENST00000427785 SLC52A1Q9NWF4 448 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms