RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 HECW2Q9P2P5 1572 aa37.89■■■■□ 3.66
SH3GL3-202ENST00000427482 DHX29Q7Z478 1369 aaKnown RBP37.88■■■■□ 3.65
SH3GL3-202ENST00000427482 MLH3Q9UHC1 1453 aa37.87■■■■□ 3.65
SH3GL3-202ENST00000427482 MYT1LQ9UL68 1186 aa37.86■■■■□ 3.65
SH3GL3-202ENST00000427482 VWDEQ8N2E2 1590 aa37.82■■■■□ 3.65
SH3GL3-202ENST00000427482 PLA2R1Q13018 1463 aa37.82■■■■□ 3.64
SH3GL3-202ENST00000427482 RICTORQ6R327 1708 aa37.81■■■■□ 3.64
SH3GL3-202ENST00000427482 PRDM15P57071 1507 aaPredicted RBP37.8■■■■□ 3.64
SH3GL3-202ENST00000427482 MROH1Q8NDA8 1641 aa37.8■■■■□ 3.64
SH3GL3-202ENST00000427482 E9PCH4 1651 aa37.8■■■■□ 3.64
SH3GL3-202ENST00000427482 ATP10AO60312 1499 aa37.8■■■■□ 3.64
SH3GL3-202ENST00000427482 TET3O43151 1660 aa37.79■■■■□ 3.64
SH3GL3-202ENST00000427482 NBPF8Q3BBV2 869 aa37.79■■■■□ 3.64
SH3GL3-202ENST00000427482 CCDC144AA2RUR9 1427 aa37.77■■■■□ 3.64
SH3GL3-202ENST00000427482 A2MP01023 1474 aa37.77■■■■□ 3.64
SH3GL3-202ENST00000427482 ABCA6Q8N139 1617 aa37.76■■■■□ 3.64
SH3GL3-202ENST00000427482 MIER1Q8N108 512 aa37.75■■■■□ 3.63
SH3GL3-202ENST00000427482 RNF17Q9BXT8 1623 aaKnown RBP37.74■■■■□ 3.63
SH3GL3-202ENST00000427482 FRMPD1Q5SYB0 1578 aa37.73■■■■□ 3.63
SH3GL3-202ENST00000427482 HIRIP3Q9BW71 556 aaPredicted RBP37.73■■■■□ 3.63
SH3GL3-202ENST00000427482 PPRC1Q5VV67 1664 aaKnown RBP37.72■■■■□ 3.63
SH3GL3-202ENST00000427482 KIF3BO15066 747 aa37.72■■■■□ 3.63
SH3GL3-202ENST00000427482 KANK1Q14678 1352 aa37.72■■■■□ 3.63
SH3GL3-202ENST00000427482 FAM69CQ0P6D2 419 aa37.71■■■■□ 3.63
SH3GL3-202ENST00000427482 BCORL1Q5H9F3 1711 aa37.71■■■■□ 3.63
SH3GL3-202ENST00000427482 UHRF1BP1Q6BDS2 1440 aa37.69■■■■□ 3.62
SH3GL3-202ENST00000427482 TSPOAP1O95153 1857 aa37.68■■■■□ 3.62
SH3GL3-202ENST00000427482 SPHKAPQ2M3C7 1700 aa37.68■■■■□ 3.62
SH3GL3-202ENST00000427482 RAPGEF3O95398 923 aa37.65■■■■□ 3.62
SH3GL3-202ENST00000427482 DIP2CQ9Y2E4 1556 aa37.64■■■■□ 3.62
SH3GL3-202ENST00000427482 HSPA5P11021 654 aaKnown RBP37.63■■■■□ 3.61
SH3GL3-202ENST00000427482 EIF4G2P78344 907 aaKnown RBP eCLIP37.63■■■■□ 3.614e-7■□□□□ 9.9
SH3GL3-202ENST00000427482 KIF13AQ9H1H9 1805 aa37.63■■■■□ 3.61
SH3GL3-202ENST00000427482 TRPM2O94759 1503 aa37.62■■■■□ 3.61
SH3GL3-202ENST00000427482 CEP152O94986 1710 aa37.59■■■■□ 3.61
SH3GL3-202ENST00000427482 LMTK2Q8IWU2 1503 aa37.59■■■■□ 3.61
SH3GL3-202ENST00000427482 PTPRTO14522 1441 aa37.59■■■■□ 3.61
SH3GL3-202ENST00000427482 RALGAPBQ86X10 1494 aa37.57■■■■□ 3.6
SH3GL3-202ENST00000427482 EFCAB6Q5THR3 1501 aa37.56■■■■□ 3.6
SH3GL3-202ENST00000427482 ZMYM4Q5VZL5 1548 aa37.56■■■■□ 3.6
SH3GL3-202ENST00000427482 DDX10Q13206 875 aaKnown RBP37.53■■■■□ 3.6
SH3GL3-202ENST00000427482 SPATA31E1Q6ZUB1 1445 aa37.52■■■■□ 3.6
SH3GL3-202ENST00000427482 ZNF326Q5BKZ1 582 aaKnown RBP37.51■■■■□ 3.6
SH3GL3-202ENST00000427482 DCAF11Q8TEB1 546 aa37.51■■■■□ 3.6
SH3GL3-202ENST00000427482 CLTCL1P53675 1640 aa37.5■■■■□ 3.59
SH3GL3-202ENST00000427482 POLR1AO95602 1720 aaPredicted RBP37.47■■■■□ 3.59
SH3GL3-202ENST00000427482 YEATS2Q9ULM3 1422 aa37.46■■■■□ 3.59
SH3GL3-202ENST00000427482 KDM2AQ9Y2K7 1162 aa37.45■■■■□ 3.59
SH3GL3-202ENST00000427482 TRPM1Q7Z4N2 1603 aa37.44■■■■□ 3.58
SH3GL3-202ENST00000427482 PRAG1Q86YV5 1406 aa37.44■■■■□ 3.58
SH3GL3-202ENST00000427482 RGL3Q3MIN7 710 aa37.41■■■■□ 3.58
SH3GL3-202ENST00000427482 ABCC3O15438 1527 aa37.39■■■■□ 3.58
SH3GL3-202ENST00000427482 NEURL4Q96JN8 1562 aa37.38■■■■□ 3.58
SH3GL3-202ENST00000427482 WASHC2AQ641Q2 1341 aa37.38■■■■□ 3.57
SH3GL3-202ENST00000427482 USP47Q96K76 1375 aa37.37■■■■□ 3.57
SH3GL3-202ENST00000427482 CAMSAP1Q5T5Y3 1602 aa37.35■■■■□ 3.57
SH3GL3-202ENST00000427482 GGT6Q6P531 493 aa37.35■■■■□ 3.57
SH3GL3-202ENST00000427482 ZC3H13Q5T200 1668 aaKnown RBP37.34■■■■□ 3.57
SH3GL3-202ENST00000427482 KIF1BO60333 1816 aa37.33■■■■□ 3.57
SH3GL3-202ENST00000427482 LAMC1P11047 1609 aa37.3■■■■□ 3.56
SH3GL3-202ENST00000427482 REREQ9P2R6 1566 aa37.3■■■■□ 3.56
SH3GL3-202ENST00000427482 NPATQ14207 1427 aa37.29■■■■□ 3.56
SH3GL3-202ENST00000427482 CCDC7Q96M83 1385 aa37.29■■■■□ 3.56
SH3GL3-202ENST00000427482 UGGT1Q9NYU2 1555 aa37.28■■■■□ 3.56
SH3GL3-202ENST00000427482 CARD11Q9BXL7 1154 aa37.28■■■■□ 3.56
SH3GL3-202ENST00000427482 ROCK2O75116 1388 aaKnown RBP37.26■■■■□ 3.56
SH3GL3-202ENST00000427482 MADDQ8WXG6 1647 aa37.26■■■■□ 3.55
SH3GL3-202ENST00000427482 C11orf95C9JLR9 678 aaPredicted RBP37.26■■■■□ 3.55
SH3GL3-202ENST00000427482 WASHC2CQ9Y4E1 1318 aa37.25■■■■□ 3.55
SH3GL3-202ENST00000427482 CFAP65Q6ZU64 1925 aaKnown RBP37.25■■■■□ 3.55
SH3GL3-202ENST00000427482 GPRASP1Q5JY77 1395 aa37.23■■■■□ 3.55
SH3GL3-202ENST00000427482 SIGLEC1Q9BZZ2 1709 aa37.21■■■■□ 3.55
SH3GL3-202ENST00000427482 MROH2AA6NES4 1674 aa37.2■■■■□ 3.55
SH3GL3-202ENST00000427482 CNTLNQ9NXG0 1405 aa37.2■■■■□ 3.55
SH3GL3-202ENST00000427482 COL17A1Q9UMD9 1497 aaPredicted RBP37.19■■■■□ 3.54
SH3GL3-202ENST00000427482 IFT172Q9UG01 1749 aa37.18■■■■□ 3.54
SH3GL3-202ENST00000427482 STAC3Q96MF2 364 aa37.18■■■■□ 3.54
SH3GL3-202ENST00000427482 AGLP35573 1532 aa37.18■■■■□ 3.54
SH3GL3-202ENST00000427482 KIF7Q2M1P5 1343 aa37.17■■■■□ 3.54
SH3GL3-202ENST00000427482 ARHGAP31Q2M1Z3 1444 aa37.16■■■■□ 3.54
SH3GL3-202ENST00000427482 ARHGEF40Q8TER5 1519 aa37.15■■■■□ 3.54
SH3GL3-202ENST00000427482 ADGRB3O60242 1522 aa37.14■■■■□ 3.54
SH3GL3-202ENST00000427482 NOS1P29475 1434 aa37.12■■■■□ 3.53
SH3GL3-202ENST00000427482 ANP32CO43423 234 aa37.11■■■■□ 3.53
SH3GL3-202ENST00000427482 NBPF1Q3BBV0 1214 aa37.11■■■■□ 3.53
SH3GL3-202ENST00000427482 PIK3C2BO00750 1634 aa37.1■■■■□ 3.53
SH3GL3-202ENST00000427482 YTHDC1Q96MU7 727 aaKnown RBP37.1■■■■□ 3.53
SH3GL3-202ENST00000427482 MYOM2P54296 1465 aa37.09■■■■□ 3.53
SH3GL3-202ENST00000427482 KIAA1210Q9ULL0 1709 aa37.09■■■■□ 3.53
SH3GL3-202ENST00000427482 SYNMO15061 1565 aa37.08■■■■□ 3.53
SH3GL3-202ENST00000427482 CENPBP07199 599 aaPredicted RBP37.08■■■■□ 3.53
SH3GL3-202ENST00000427482 ARID4BQ4LE39 1312 aaPredicted RBP37.08■■■■□ 3.53
SH3GL3-202ENST00000427482 ST20-MTHFSA0A0A6YYL1 179 aa37.05■■■■□ 3.52
SH3GL3-202ENST00000427482 PREX1Q8TCU6 1659 aa37.03■■■■□ 3.52
SH3GL3-202ENST00000427482 IQGAP1P46940 1657 aa37.02■■■■□ 3.52
SH3GL3-202ENST00000427482 PPLO60437 1756 aa37.01■■■■□ 3.52
SH3GL3-202ENST00000427482 CCER2I3L3R5 266 aa36.98■■■■□ 3.51
SH3GL3-202ENST00000427482 NRXN1Q9ULB1 1477 aa36.96■■■■□ 3.51
SH3GL3-202ENST00000427482 PPP6R1Q9UPN7 881 aa36.96■■■■□ 3.51
SH3GL3-202ENST00000427482 CLTCQ00610 1675 aaKnown RBP36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms