RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 MYBBP1AQ9BQG0 1328 aaKnown RBP19.3■□□□□ 0.68
ERCC3-202ENST00000426778 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
ERCC3-202ENST00000426778 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
ERCC3-202ENST00000426778 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
ERCC3-202ENST00000426778 PLIN1O60240 522 aa19.28■□□□□ 0.68
ERCC3-202ENST00000426778 UHRF1BP1Q6BDS2 1440 aa19.28■□□□□ 0.68
ERCC3-202ENST00000426778 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
ERCC3-202ENST00000426778 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
ERCC3-202ENST00000426778 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
ERCC3-202ENST00000426778 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
ERCC3-202ENST00000426778 RCAN3Q9UKA8 241 aa19.24■□□□□ 0.67
ERCC3-202ENST00000426778 RALBP1Q15311 655 aa19.23■□□□□ 0.67
ERCC3-202ENST00000426778 NUP160Q12769 1436 aa19.23■□□□□ 0.67
ERCC3-202ENST00000426778 ABCA8O94911 1581 aa19.23■□□□□ 0.67
ERCC3-202ENST00000426778 CCDC144AA2RUR9 1427 aa19.23■□□□□ 0.67
ERCC3-202ENST00000426778 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
ERCC3-202ENST00000426778 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-202ENST00000426778 DISP3Q9P2K9 1392 aa19.21■□□□□ 0.67
ERCC3-202ENST00000426778 PANK3Q9H999 370 aa19.21■□□□□ 0.67
ERCC3-202ENST00000426778 PTPRGP23470 1445 aa19.21■□□□□ 0.67
ERCC3-202ENST00000426778 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
ERCC3-202ENST00000426778 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
ERCC3-202ENST00000426778 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
ERCC3-202ENST00000426778 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
ERCC3-202ENST00000426778 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
ERCC3-202ENST00000426778 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
ERCC3-202ENST00000426778 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
ERCC3-202ENST00000426778 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
ERCC3-202ENST00000426778 PRAG1Q86YV5 1406 aa19.17■□□□□ 0.66
ERCC3-202ENST00000426778 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
ERCC3-202ENST00000426778 KDM5DQ9BY66 1539 aa19.16■□□□□ 0.66
ERCC3-202ENST00000426778 CCDC141Q6ZP82 1450 aa19.16■□□□□ 0.66
ERCC3-202ENST00000426778 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
ERCC3-202ENST00000426778 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
ERCC3-202ENST00000426778 IPO9Q96P70 1041 aaKnown RBP19.14■□□□□ 0.66
ERCC3-202ENST00000426778 TESK2Q96S53 571 aa19.14■□□□□ 0.66
ERCC3-202ENST00000426778 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
ERCC3-202ENST00000426778 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.65
ERCC3-202ENST00000426778 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
ERCC3-202ENST00000426778 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-202ENST00000426778 A2MP01023 1474 aa19.13■□□□□ 0.65
ERCC3-202ENST00000426778 ARHGAP5Q13017 1502 aa19.12■□□□□ 0.65
ERCC3-202ENST00000426778 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
ERCC3-202ENST00000426778 E9PCH4 1651 aa19.1■□□□□ 0.65
ERCC3-202ENST00000426778 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
ERCC3-202ENST00000426778 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
ERCC3-202ENST00000426778 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
ERCC3-202ENST00000426778 ADAMTS8Q9UP79 889 aa19.09■□□□□ 0.65
ERCC3-202ENST00000426778 TTC37Q6PGP7 1564 aa19.08■□□□□ 0.64
ERCC3-202ENST00000426778 PDE4AP27815 886 aa19.07■□□□□ 0.64
ERCC3-202ENST00000426778 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
ERCC3-202ENST00000426778 TMF1P82094 1093 aa19.06■□□□□ 0.64
ERCC3-202ENST00000426778 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
ERCC3-202ENST00000426778 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
ERCC3-202ENST00000426778 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
ERCC3-202ENST00000426778 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.64
ERCC3-202ENST00000426778 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
ERCC3-202ENST00000426778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
ERCC3-202ENST00000426778 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
ERCC3-202ENST00000426778 PDE3BQ13370 1112 aa19■□□□□ 0.63
ERCC3-202ENST00000426778 AFAP1Q8N556 730 aa19■□□□□ 0.63
ERCC3-202ENST00000426778 MYT1LQ9UL68 1186 aa19■□□□□ 0.63
ERCC3-202ENST00000426778 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
ERCC3-202ENST00000426778 MYO5CQ9NQX4 1742 aa19■□□□□ 0.63
ERCC3-202ENST00000426778 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-202ENST00000426778 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
ERCC3-202ENST00000426778 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
ERCC3-202ENST00000426778 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
ERCC3-202ENST00000426778 PPP2R1AP30153 589 aa18.97■□□□□ 0.63
ERCC3-202ENST00000426778 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
ERCC3-202ENST00000426778 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
ERCC3-202ENST00000426778 PLEKHH1Q9ULM0 1364 aa18.96■□□□□ 0.63
ERCC3-202ENST00000426778 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
ERCC3-202ENST00000426778 PRDM15P57071 1507 aaPredicted RBP18.96■□□□□ 0.63
ERCC3-202ENST00000426778 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
ERCC3-202ENST00000426778 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
ERCC3-202ENST00000426778 UNC13BO14795 1591 aa18.92■□□□□ 0.62
ERCC3-202ENST00000426778 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-202ENST00000426778 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
ERCC3-202ENST00000426778 CHD1O14646 1710 aa18.91■□□□□ 0.62
ERCC3-202ENST00000426778 NEFMP07197 916 aa18.9■□□□□ 0.62
ERCC3-202ENST00000426778 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
ERCC3-202ENST00000426778 RGS3P49796 1198 aa18.9■□□□□ 0.62
ERCC3-202ENST00000426778 EFCAB2Q5VUJ9 269 aa18.9■□□□□ 0.62
ERCC3-202ENST00000426778 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
ERCC3-202ENST00000426778 IQGAP3Q86VI3 1631 aa18.89■□□□□ 0.61
ERCC3-202ENST00000426778 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
ERCC3-202ENST00000426778 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
ERCC3-202ENST00000426778 APAF1O14727 1248 aa18.88■□□□□ 0.61
ERCC3-202ENST00000426778 SPAG9O60271 1321 aaKnown RBP18.88■□□□□ 0.61
ERCC3-202ENST00000426778 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
ERCC3-202ENST00000426778 CFAP70Q5T0N1 1121 aa18.87■□□□□ 0.61
ERCC3-202ENST00000426778 DMRT2Q9Y5R5 561 aa18.86■□□□□ 0.61
ERCC3-202ENST00000426778 GOLGA2Q08379 1002 aa18.86■□□□□ 0.61
ERCC3-202ENST00000426778 ZMYM4Q5VZL5 1548 aa18.86■□□□□ 0.61
ERCC3-202ENST00000426778 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
ERCC3-202ENST00000426778 BCAR3O75815 825 aa18.85■□□□□ 0.61
ERCC3-202ENST00000426778 KIF3BO15066 747 aa18.84■□□□□ 0.61
ERCC3-202ENST00000426778 MAST1Q9Y2H9 1570 aa18.84■□□□□ 0.61
ERCC3-202ENST00000426778 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms