RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KIDINS220Q9ULH0 1771 aa15.12■□□□□ 0.01
MDC1-205ENST00000425072 KIF3BO15066 747 aa15.12■□□□□ 0.01
MDC1-205ENST00000425072 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
MDC1-205ENST00000425072 ZFYVE16Q7Z3T8 1539 aa15.12■□□□□ 0.01
MDC1-205ENST00000425072 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
MDC1-205ENST00000425072 NUP155O75694 1391 aa15.11■□□□□ 0.01
MDC1-205ENST00000425072 A2MP01023 1474 aa15.1■□□□□ 0.01
MDC1-205ENST00000425072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.012e-7■■□□□ 13.4
MDC1-205ENST00000425072 ATP10AO60312 1499 aa15.08■□□□□ 0.01
MDC1-205ENST00000425072 COL17A1Q9UMD9 1497 aaPredicted RBP15.08■□□□□ 0.01
MDC1-205ENST00000425072 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0.01
MDC1-205ENST00000425072 KANK1Q14678 1352 aa15.08■□□□□ 0
MDC1-205ENST00000425072 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
MDC1-205ENST00000425072 GGT6Q6P531 493 aa15.04■□□□□ -0
MDC1-205ENST00000425072 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
MDC1-205ENST00000425072 PKD2Q13563 968 aa15.03■□□□□ -0
MDC1-205ENST00000425072 EIF2AK4Q9P2K8 1649 aaKnown RBP15.03■□□□□ -0
MDC1-205ENST00000425072 YEATS2Q9ULM3 1422 aa15.02■□□□□ -0
MDC1-205ENST00000425072 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
MDC1-205ENST00000425072 DIP2CQ9Y2E4 1556 aa15.01□□□□□ -0.01
MDC1-205ENST00000425072 ABCA6Q8N139 1617 aa15□□□□□ -0.01
MDC1-205ENST00000425072 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
MDC1-205ENST00000425072 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
MDC1-205ENST00000425072 UNC13BO14795 1591 aa14.98□□□□□ -0.01
MDC1-205ENST00000425072 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
MDC1-205ENST00000425072 PZPP20742 1482 aa14.98□□□□□ -0.01
MDC1-205ENST00000425072 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
MDC1-205ENST00000425072 ARID4BQ4LE39 1312 aaPredicted RBP14.97□□□□□ -0.01
MDC1-205ENST00000425072 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
MDC1-205ENST00000425072 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
MDC1-205ENST00000425072 AGLP35573 1532 aa14.97□□□□□ -0.01
MDC1-205ENST00000425072 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
MDC1-205ENST00000425072 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
MDC1-205ENST00000425072 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
MDC1-205ENST00000425072 ANKRD30BQ9BXX2 1392 aa14.95□□□□□ -0.02
MDC1-205ENST00000425072 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
MDC1-205ENST00000425072 IQGAP3Q86VI3 1631 aa14.95□□□□□ -0.02
MDC1-205ENST00000425072 ARHGEF40Q8TER5 1519 aa14.92□□□□□ -0.02
MDC1-205ENST00000425072 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
MDC1-205ENST00000425072 MLECQ14165 292 aa14.91□□□□□ -0.02
MDC1-205ENST00000425072 PRDM15P57071 1507 aaPredicted RBP14.91□□□□□ -0.02
MDC1-205ENST00000425072 VWDEQ8N2E2 1590 aa14.9□□□□□ -0.02
MDC1-205ENST00000425072 LMTK2Q8IWU2 1503 aa14.89□□□□□ -0.03
MDC1-205ENST00000425072 TET3O43151 1660 aa14.88□□□□□ -0.03
MDC1-205ENST00000425072 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
MDC1-205ENST00000425072 RPRD2Q5VT52 1461 aaKnown RBP14.87□□□□□ -0.03
MDC1-205ENST00000425072 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
MDC1-205ENST00000425072 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
MDC1-205ENST00000425072 ABCC3O15438 1527 aa14.84□□□□□ -0.03
MDC1-205ENST00000425072 ZC3H13Q5T200 1668 aaKnown RBP14.84□□□□□ -0.03
MDC1-205ENST00000425072 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.03
MDC1-205ENST00000425072 PTPRTO14522 1441 aa14.83□□□□□ -0.03
MDC1-205ENST00000425072 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
MDC1-205ENST00000425072 STAC3Q96MF2 364 aa14.83□□□□□ -0.04
MDC1-205ENST00000425072 SLC52A1Q9NWF4 448 aa14.83□□□□□ -0.04
MDC1-205ENST00000425072 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
MDC1-205ENST00000425072 CNTLNQ9NXG0 1405 aa14.83□□□□□ -0.04
MDC1-205ENST00000425072 E9PCH4 1651 aa14.82□□□□□ -0.04
MDC1-205ENST00000425072 CEP152O94986 1710 aa14.81□□□□□ -0.04
MDC1-205ENST00000425072 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
MDC1-205ENST00000425072 EFCAB6Q5THR3 1501 aa14.81□□□□□ -0.04
MDC1-205ENST00000425072 L3MBTL2Q969R5 705 aa14.8□□□□□ -0.04
MDC1-205ENST00000425072 PLA2R1Q13018 1463 aa14.79□□□□□ -0.04
MDC1-205ENST00000425072 NPATQ14207 1427 aa14.79□□□□□ -0.04
MDC1-205ENST00000425072 CAMSAP1Q5T5Y3 1602 aa14.78□□□□□ -0.04
MDC1-205ENST00000425072 RGL3Q3MIN7 710 aa14.77□□□□□ -0.05
MDC1-205ENST00000425072 SPHKAPQ2M3C7 1700 aa14.77□□□□□ -0.05
MDC1-205ENST00000425072 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.05
MDC1-205ENST00000425072 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
MDC1-205ENST00000425072 NOS1P29475 1434 aa14.75□□□□□ -0.05
MDC1-205ENST00000425072 FBXO31Q5XUX0 539 aaPredicted RBP14.75□□□□□ -0.05
MDC1-205ENST00000425072 DCAF11Q8TEB1 546 aa14.75□□□□□ -0.05
MDC1-205ENST00000425072 TRPM2O94759 1503 aa14.75□□□□□ -0.05
MDC1-205ENST00000425072 CHGAP10645 457 aaKnown RBP14.74□□□□□ -0.05
MDC1-205ENST00000425072 IDI1Q13907 227 aa14.74□□□□□ -0.05
MDC1-205ENST00000425072 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
MDC1-205ENST00000425072 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
MDC1-205ENST00000425072 KDM2AQ9Y2K7 1162 aa14.72□□□□□ -0.05
MDC1-205ENST00000425072 SPATA31D1Q6ZQQ2 1576 aa14.72□□□□□ -0.05
MDC1-205ENST00000425072 KIF1BO60333 1816 aa14.71□□□□□ -0.05
MDC1-205ENST00000425072 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
MDC1-205ENST00000425072 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.05
MDC1-205ENST00000425072 MROH2AA6NES4 1674 aa14.71□□□□□ -0.06
MDC1-205ENST00000425072 NEURL4Q96JN8 1562 aa14.69□□□□□ -0.06
MDC1-205ENST00000425072 PREX1Q8TCU6 1659 aa14.69□□□□□ -0.06
MDC1-205ENST00000425072 ERVK-7P63135 1459 aa14.69□□□□□ -0.06
MDC1-205ENST00000425072 SPATA31E1Q6ZUB1 1445 aa14.68□□□□□ -0.06
MDC1-205ENST00000425072 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
MDC1-205ENST00000425072 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
MDC1-205ENST00000425072 FER1L4A9Z1Z3 1794 aa14.68□□□□□ -0.06
MDC1-205ENST00000425072 SETD1BQ9UPS6 1966 aaKnown RBP14.67□□□□□ -0.06
MDC1-205ENST00000425072 CLTCL1P53675 1640 aa14.67□□□□□ -0.06
MDC1-205ENST00000425072 TNRQ92752 1358 aa14.66□□□□□ -0.06
MDC1-205ENST00000425072 CERKQ8TCT0 537 aa14.66□□□□□ -0.06
MDC1-205ENST00000425072 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
MDC1-205ENST00000425072 NBPF8Q3BBV2 869 aa14.64□□□□□ -0.07
MDC1-205ENST00000425072 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
MDC1-205ENST00000425072 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
MDC1-205ENST00000425072 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
MDC1-205ENST00000425072 UHRF1BP1Q6BDS2 1440 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms