RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
ABCA1-203ENST00000423487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.362e-8■■□□□ 12.7
ABCA1-203ENST00000423487 KANK1Q14678 1352 aa23.53■■□□□ 1.36
ABCA1-203ENST00000423487 KDM5DQ9BY66 1539 aa23.53■■□□□ 1.36
ABCA1-203ENST00000423487 DEPDC5O75140 1603 aa23.52■■□□□ 1.36
ABCA1-203ENST00000423487 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
ABCA1-203ENST00000423487 GGT6Q6P531 493 aa23.52■■□□□ 1.36
ABCA1-203ENST00000423487 RNF17Q9BXT8 1623 aaKnown RBP23.52■■□□□ 1.36
ABCA1-203ENST00000423487 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
ABCA1-203ENST00000423487 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
ABCA1-203ENST00000423487 ARID4BQ4LE39 1312 aaPredicted RBP23.5■■□□□ 1.35
ABCA1-203ENST00000423487 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
ABCA1-203ENST00000423487 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
ABCA1-203ENST00000423487 PZPP20742 1482 aa23.48■■□□□ 1.35
ABCA1-203ENST00000423487 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
ABCA1-203ENST00000423487 FAM135AQ9P2D6 1515 aa23.47■■□□□ 1.35
ABCA1-203ENST00000423487 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
ABCA1-203ENST00000423487 IQGAP3Q86VI3 1631 aa23.46■■□□□ 1.35
ABCA1-203ENST00000423487 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
ABCA1-203ENST00000423487 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
ABCA1-203ENST00000423487 WASHC2CQ9Y4E1 1318 aa23.43■■□□□ 1.34
ABCA1-203ENST00000423487 MLECQ14165 292 aa23.43■■□□□ 1.34
ABCA1-203ENST00000423487 PKD2Q13563 968 aa23.41■■□□□ 1.34
ABCA1-203ENST00000423487 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
ABCA1-203ENST00000423487 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.33
ABCA1-203ENST00000423487 ABCC3O15438 1527 aa23.37■■□□□ 1.33
ABCA1-203ENST00000423487 ESF1Q9H501 851 aaKnown RBP23.36■■□□□ 1.33
ABCA1-203ENST00000423487 TET3O43151 1660 aa23.36■■□□□ 1.33
ABCA1-203ENST00000423487 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
ABCA1-203ENST00000423487 FOXD1Q16676 465 aa23.33■■□□□ 1.33
ABCA1-203ENST00000423487 CEP152O94986 1710 aa23.33■■□□□ 1.32
ABCA1-203ENST00000423487 EFCAB6Q5THR3 1501 aa23.32■■□□□ 1.32
ABCA1-203ENST00000423487 CNTLNQ9NXG0 1405 aa23.3■■□□□ 1.32
ABCA1-203ENST00000423487 ARHGAP31Q2M1Z3 1444 aa23.29■■□□□ 1.32
ABCA1-203ENST00000423487 CAMSAP1Q5T5Y3 1602 aa23.29■■□□□ 1.32
ABCA1-203ENST00000423487 RPRD2Q5VT52 1461 aaKnown RBP23.29■■□□□ 1.32
ABCA1-203ENST00000423487 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
ABCA1-203ENST00000423487 NPATQ14207 1427 aa23.27■■□□□ 1.32
ABCA1-203ENST00000423487 E9PCH4 1651 aa23.27■■□□□ 1.32
ABCA1-203ENST00000423487 CLTCQ00610 1675 aaKnown RBP23.25■■□□□ 1.31
ABCA1-203ENST00000423487 ZMYM3Q14202 1370 aa23.23■■□□□ 1.31
ABCA1-203ENST00000423487 PTPRTO14522 1441 aa23.22■■□□□ 1.31
ABCA1-203ENST00000423487 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 FER1L4A9Z1Z3 1794 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
ABCA1-203ENST00000423487 MROH2AA6NES4 1674 aa23.19■■□□□ 1.3
ABCA1-203ENST00000423487 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 CCDC144AA2RUR9 1427 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
ABCA1-203ENST00000423487 NOS1P29475 1434 aa23.17■■□□□ 1.3
ABCA1-203ENST00000423487 TRPM2O94759 1503 aa23.17■■□□□ 1.3
ABCA1-203ENST00000423487 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
ABCA1-203ENST00000423487 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
ABCA1-203ENST00000423487 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.3
ABCA1-203ENST00000423487 ERVK-7P63135 1459 aa23.14■■□□□ 1.3
ABCA1-203ENST00000423487 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
ABCA1-203ENST00000423487 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
ABCA1-203ENST00000423487 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
ABCA1-203ENST00000423487 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
ABCA1-203ENST00000423487 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
ABCA1-203ENST00000423487 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
ABCA1-203ENST00000423487 TIMELESSQ9UNS1 1208 aa23.09■■□□□ 1.29
ABCA1-203ENST00000423487 CFAP65Q6ZU64 1925 aaKnown RBP23.09■■□□□ 1.29
ABCA1-203ENST00000423487 SYNMO15061 1565 aa23.08■■□□□ 1.29
ABCA1-203ENST00000423487 C3P01024 1663 aa23.08■■□□□ 1.28
ABCA1-203ENST00000423487 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
ABCA1-203ENST00000423487 CLTCL1P53675 1640 aa23.06■■□□□ 1.28
ABCA1-203ENST00000423487 TNRQ92752 1358 aa23.06■■□□□ 1.28
ABCA1-203ENST00000423487 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
ABCA1-203ENST00000423487 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
ABCA1-203ENST00000423487 IDI1Q13907 227 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 PIK3C2BO00750 1634 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 PTPRMP28827 1452 aa23.03■■□□□ 1.28
ABCA1-203ENST00000423487 SPATA31E1Q6ZUB1 1445 aa23■■□□□ 1.27
ABCA1-203ENST00000423487 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
ABCA1-203ENST00000423487 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 L3MBTL2Q969R5 705 aa22.98■■□□□ 1.27
ABCA1-203ENST00000423487 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
ABCA1-203ENST00000423487 KIF1BO60333 1816 aa22.96■■□□□ 1.27
ABCA1-203ENST00000423487 STAG3Q9UJ98 1225 aa22.96■■□□□ 1.27
ABCA1-203ENST00000423487 ADGRB3O60242 1522 aa22.95■■□□□ 1.26
ABCA1-203ENST00000423487 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
ABCA1-203ENST00000423487 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
ABCA1-203ENST00000423487 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
ABCA1-203ENST00000423487 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
ABCA1-203ENST00000423487 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
ABCA1-203ENST00000423487 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
ABCA1-203ENST00000423487 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
ABCA1-203ENST00000423487 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
ABCA1-203ENST00000423487 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
ABCA1-203ENST00000423487 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
ABCA1-203ENST00000423487 KDM5AP29375 1690 aaKnown RBP22.86■■□□□ 1.25
ABCA1-203ENST00000423487 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
ABCA1-203ENST00000423487 THEMISQ8N1K5 641 aaPredicted RBP22.83■■□□□ 1.25
ABCA1-203ENST00000423487 CEP170BQ9Y4F5 1589 aaPredicted RBP22.83■■□□□ 1.25
ABCA1-203ENST00000423487 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
ABCA1-203ENST00000423487 MYOM2P54296 1465 aa22.81■■□□□ 1.24
ABCA1-203ENST00000423487 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms