RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 NISCHQ9Y2I1 1504 aa37.32■■■■□ 3.56
ABCA1-203ENST00000423487 CCDC180Q9P1Z9 1646 aa32.83■■■□□ 2.85
ABCA1-203ENST00000423487 ABCC9O60706 1549 aa31.5■■■□□ 2.63
ABCA1-203ENST00000423487 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
ABCA1-203ENST00000423487 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
ABCA1-203ENST00000423487 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
ABCA1-203ENST00000423487 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
ABCA1-203ENST00000423487 NACADO15069 1562 aa30.74■■■□□ 2.51
ABCA1-203ENST00000423487 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
ABCA1-203ENST00000423487 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
ABCA1-203ENST00000423487 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
ABCA1-203ENST00000423487 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
ABCA1-203ENST00000423487 BICRAQ9NZM4 1560 aa29.61■■■□□ 2.33
ABCA1-203ENST00000423487 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
ABCA1-203ENST00000423487 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
ABCA1-203ENST00000423487 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
ABCA1-203ENST00000423487 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
ABCA1-203ENST00000423487 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
ABCA1-203ENST00000423487 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.2
ABCA1-203ENST00000423487 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
ABCA1-203ENST00000423487 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
ABCA1-203ENST00000423487 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
ABCA1-203ENST00000423487 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
ABCA1-203ENST00000423487 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
ABCA1-203ENST00000423487 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
ABCA1-203ENST00000423487 WIZO95785 1651 aa28.47■■■□□ 2.15
ABCA1-203ENST00000423487 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
ABCA1-203ENST00000423487 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
ABCA1-203ENST00000423487 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
ABCA1-203ENST00000423487 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
ABCA1-203ENST00000423487 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
ABCA1-203ENST00000423487 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
ABCA1-203ENST00000423487 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
ABCA1-203ENST00000423487 CFTRP13569 1480 aa27.56■■■□□ 2
ABCA1-203ENST00000423487 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
ABCA1-203ENST00000423487 NESP48681 1621 aa27.45■■□□□ 1.98
ABCA1-203ENST00000423487 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
ABCA1-203ENST00000423487 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
ABCA1-203ENST00000423487 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
ABCA1-203ENST00000423487 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
ABCA1-203ENST00000423487 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
ABCA1-203ENST00000423487 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
ABCA1-203ENST00000423487 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
ABCA1-203ENST00000423487 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
ABCA1-203ENST00000423487 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
ABCA1-203ENST00000423487 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
ABCA1-203ENST00000423487 TRIM41Q8WV44 630 aa26.95■■□□□ 1.91
ABCA1-203ENST00000423487 CUX1P39880 1505 aa26.94■■□□□ 1.9
ABCA1-203ENST00000423487 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
ABCA1-203ENST00000423487 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
ABCA1-203ENST00000423487 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
ABCA1-203ENST00000423487 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
ABCA1-203ENST00000423487 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
ABCA1-203ENST00000423487 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
ABCA1-203ENST00000423487 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
ABCA1-203ENST00000423487 WDR62O43379 1518 aa26.84■■□□□ 1.89
ABCA1-203ENST00000423487 FGD5Q6ZNL6 1462 aa26.75■■□□□ 1.87
ABCA1-203ENST00000423487 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
ABCA1-203ENST00000423487 SOGA1O94964 1423 aa26.65■■□□□ 1.86
ABCA1-203ENST00000423487 CUX2O14529 1486 aa26.6■■□□□ 1.85
ABCA1-203ENST00000423487 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
ABCA1-203ENST00000423487 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
ABCA1-203ENST00000423487 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
ABCA1-203ENST00000423487 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
ABCA1-203ENST00000423487 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
ABCA1-203ENST00000423487 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
ABCA1-203ENST00000423487 EEA1Q15075 1411 aa26.43■■□□□ 1.82
ABCA1-203ENST00000423487 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
ABCA1-203ENST00000423487 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.82
ABCA1-203ENST00000423487 FAM9AQ8IZU1 332 aaPredicted RBP26.37■■□□□ 1.81
ABCA1-203ENST00000423487 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
ABCA1-203ENST00000423487 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
ABCA1-203ENST00000423487 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
ABCA1-203ENST00000423487 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.815e-6■□□□□ 10.9
ABCA1-203ENST00000423487 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
ABCA1-203ENST00000423487 EIF4G3O43432 1585 aaKnown RBP26.27■■□□□ 1.8
ABCA1-203ENST00000423487 IGF1RP08069 1367 aa26.26■■□□□ 1.79
ABCA1-203ENST00000423487 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
ABCA1-203ENST00000423487 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
ABCA1-203ENST00000423487 PBRM1Q86U86 1689 aa26.17■■□□□ 1.78
ABCA1-203ENST00000423487 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
ABCA1-203ENST00000423487 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
ABCA1-203ENST00000423487 CUL7Q14999 1698 aa26.11■■□□□ 1.77
ABCA1-203ENST00000423487 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
ABCA1-203ENST00000423487 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
ABCA1-203ENST00000423487 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
ABCA1-203ENST00000423487 KIF21BO75037 1637 aa26.05■■□□□ 1.76
ABCA1-203ENST00000423487 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
ABCA1-203ENST00000423487 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
ABCA1-203ENST00000423487 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
ABCA1-203ENST00000423487 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
ABCA1-203ENST00000423487 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
ABCA1-203ENST00000423487 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
ABCA1-203ENST00000423487 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
ABCA1-203ENST00000423487 FBLN2P98095 1184 aa25.93■■□□□ 1.74
ABCA1-203ENST00000423487 UBTFP17480 764 aaKnown RBP25.9■■□□□ 1.74
ABCA1-203ENST00000423487 GRIN2AQ12879 1464 aa25.89■■□□□ 1.74
ABCA1-203ENST00000423487 TNIKQ9UKE5 1360 aa25.81■■□□□ 1.72
ABCA1-203ENST00000423487 CHD1O14646 1710 aa25.78■■□□□ 1.72
ABCA1-203ENST00000423487 NUP160Q12769 1436 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms