RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
SRPK1-205ENST00000423325 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
SRPK1-205ENST00000423325 UHRF1BP1Q6BDS2 1440 aa13.44□□□□□ -0.26
SRPK1-205ENST00000423325 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
SRPK1-205ENST00000423325 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
SRPK1-205ENST00000423325 A2MP01023 1474 aa13.43□□□□□ -0.26
SRPK1-205ENST00000423325 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
SRPK1-205ENST00000423325 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
SRPK1-205ENST00000423325 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
SRPK1-205ENST00000423325 CCER2I3L3R5 266 aa13.42□□□□□ -0.26
SRPK1-205ENST00000423325 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
SRPK1-205ENST00000423325 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
SRPK1-205ENST00000423325 ADGRL1O94910 1474 aa13.41□□□□□ -0.26
SRPK1-205ENST00000423325 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
SRPK1-205ENST00000423325 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
SRPK1-205ENST00000423325 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
SRPK1-205ENST00000423325 E9PCH4 1651 aa13.41□□□□□ -0.26
SRPK1-205ENST00000423325 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
SRPK1-205ENST00000423325 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
SRPK1-205ENST00000423325 ST20-MTHFSA0A0A6YYL1 179 aa13.4□□□□□ -0.26
SRPK1-205ENST00000423325 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
SRPK1-205ENST00000423325 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
SRPK1-205ENST00000423325 TRPM1Q7Z4N2 1603 aa13.37□□□□□ -0.27
SRPK1-205ENST00000423325 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
SRPK1-205ENST00000423325 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
SRPK1-205ENST00000423325 MROH1Q8NDA8 1641 aa13.37□□□□□ -0.27
SRPK1-205ENST00000423325 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
SRPK1-205ENST00000423325 ATP10AO60312 1499 aa13.36□□□□□ -0.27
SRPK1-205ENST00000423325 KIF3BO15066 747 aa13.36□□□□□ -0.27
SRPK1-205ENST00000423325 UGGT1Q9NYU2 1555 aa13.36□□□□□ -0.27
SRPK1-205ENST00000423325 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
SRPK1-205ENST00000423325 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
SRPK1-205ENST00000423325 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
SRPK1-205ENST00000423325 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
SRPK1-205ENST00000423325 CLTCL1P53675 1640 aa13.33□□□□□ -0.28
SRPK1-205ENST00000423325 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
SRPK1-205ENST00000423325 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
SRPK1-205ENST00000423325 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
SRPK1-205ENST00000423325 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
SRPK1-205ENST00000423325 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
SRPK1-205ENST00000423325 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRPK1-205ENST00000423325 FRMPD1Q5SYB0 1578 aa13.31□□□□□ -0.28
SRPK1-205ENST00000423325 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
SRPK1-205ENST00000423325 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRPK1-205ENST00000423325 CFAP65Q6ZU64 1925 aaKnown RBP13.29□□□□□ -0.28
SRPK1-205ENST00000423325 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
SRPK1-205ENST00000423325 TRPM2O94759 1503 aa13.29□□□□□ -0.28
SRPK1-205ENST00000423325 PTPRTO14522 1441 aa13.29□□□□□ -0.28
SRPK1-205ENST00000423325 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
SRPK1-205ENST00000423325 PRDM15P57071 1507 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-205ENST00000423325 TET3O43151 1660 aa13.28□□□□□ -0.28
SRPK1-205ENST00000423325 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
SRPK1-205ENST00000423325 TESK2Q96S53 571 aa13.28□□□□□ -0.28
SRPK1-205ENST00000423325 CEP152O94986 1710 aa13.28□□□□□ -0.28
SRPK1-205ENST00000423325 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.28
SRPK1-205ENST00000423325 MRS2Q9HD23 443 aa13.27□□□□□ -0.28
SRPK1-205ENST00000423325 GPRASP1Q5JY77 1395 aa13.27□□□□□ -0.28
SRPK1-205ENST00000423325 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.29
SRPK1-205ENST00000423325 BCANQ96GW7 911 aa13.27□□□□□ -0.29
SRPK1-205ENST00000423325 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
SRPK1-205ENST00000423325 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
SRPK1-205ENST00000423325 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
SRPK1-205ENST00000423325 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
SRPK1-205ENST00000423325 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
SRPK1-205ENST00000423325 GGT6Q6P531 493 aa13.23□□□□□ -0.29
SRPK1-205ENST00000423325 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
SRPK1-205ENST00000423325 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
SRPK1-205ENST00000423325 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
SRPK1-205ENST00000423325 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
SRPK1-205ENST00000423325 FKBP8Q14318 412 aa13.22□□□□□ -0.29
SRPK1-205ENST00000423325 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
SRPK1-205ENST00000423325 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.29
SRPK1-205ENST00000423325 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.29
SRPK1-205ENST00000423325 MLH3Q9UHC1 1453 aa13.2□□□□□ -0.3
SRPK1-205ENST00000423325 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
SRPK1-205ENST00000423325 NPATQ14207 1427 aa13.2□□□□□ -0.3
SRPK1-205ENST00000423325 LAMC1P11047 1609 aa13.2□□□□□ -0.3
SRPK1-205ENST00000423325 KANK1Q14678 1352 aa13.2□□□□□ -0.3
SRPK1-205ENST00000423325 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
SRPK1-205ENST00000423325 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
SRPK1-205ENST00000423325 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
SRPK1-205ENST00000423325 ARID4BQ4LE39 1312 aaPredicted RBP13.19□□□□□ -0.3
SRPK1-205ENST00000423325 RICTORQ6R327 1708 aa13.18□□□□□ -0.3
SRPK1-205ENST00000423325 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
SRPK1-205ENST00000423325 CFAP70Q5T0N1 1121 aa13.18□□□□□ -0.3
SRPK1-205ENST00000423325 IQGAP1P46940 1657 aa13.18□□□□□ -0.3
SRPK1-205ENST00000423325 DIP2CQ9Y2E4 1556 aa13.18□□□□□ -0.3
SRPK1-205ENST00000423325 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
SRPK1-205ENST00000423325 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
SRPK1-205ENST00000423325 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
SRPK1-205ENST00000423325 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
SRPK1-205ENST00000423325 LMTK2Q8IWU2 1503 aa13.15□□□□□ -0.3
SRPK1-205ENST00000423325 ABCC3O15438 1527 aa13.15□□□□□ -0.3
SRPK1-205ENST00000423325 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
SRPK1-205ENST00000423325 NEO1Q92859 1461 aa13.15□□□□□ -0.3
SRPK1-205ENST00000423325 PANK3Q9H999 370 aa13.14□□□□□ -0.31
SRPK1-205ENST00000423325 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
SRPK1-205ENST00000423325 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
SRPK1-205ENST00000423325 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
SRPK1-205ENST00000423325 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms