RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
PKP4-204ENST00000421462 UBE2Q2Q8WVN8 375 aa21.69■■□□□ 1.06
PKP4-204ENST00000421462 PANK3Q9H999 370 aa21.69■■□□□ 1.06
PKP4-204ENST00000421462 ADAMTS8Q9UP79 889 aa21.69■■□□□ 1.06
PKP4-204ENST00000421462 MBD5Q9P267 1494 aa21.68■■□□□ 1.06
PKP4-204ENST00000421462 LAMC3Q9Y6N6 1575 aa21.67■■□□□ 1.06
PKP4-204ENST00000421462 CENPQQ7L2Z9 268 aaPredicted RBP21.66■■□□□ 1.06
PKP4-204ENST00000421462 POGKQ9P215 609 aa21.66■■□□□ 1.06
PKP4-204ENST00000421462 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.06
PKP4-204ENST00000421462 KIF14Q15058 1648 aa21.64■■□□□ 1.06
PKP4-204ENST00000421462 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.05
PKP4-204ENST00000421462 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
PKP4-204ENST00000421462 KDM2BQ8NHM5 1336 aa21.63■■□□□ 1.05
PKP4-204ENST00000421462 PER1O15534 1290 aaPredicted RBP21.62■■□□□ 1.05
PKP4-204ENST00000421462 WDR43Q15061 677 aaKnown RBP eCLIP21.62■■□□□ 1.05
PKP4-204ENST00000421462 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
PKP4-204ENST00000421462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.056e-10■■□□□ 11.5
PKP4-204ENST00000421462 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
PKP4-204ENST00000421462 RALGAPBQ86X10 1494 aa21.61■■□□□ 1.05
PKP4-204ENST00000421462 ANKRD50Q9ULJ7 1429 aa21.61■■□□□ 1.05
PKP4-204ENST00000421462 SPRYD3Q8NCJ5 442 aa21.6■■□□□ 1.05
PKP4-204ENST00000421462 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
PKP4-204ENST00000421462 WDR62O43379 1518 aa21.58■■□□□ 1.05
PKP4-204ENST00000421462 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.04
PKP4-204ENST00000421462 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
PKP4-204ENST00000421462 BCAR3O75815 825 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 TSPY4P0CV99 314 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 TSPY10P0CW01 314 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 SEC24BO95487 1268 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
PKP4-204ENST00000421462 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
PKP4-204ENST00000421462 GOLGA2Q08379 1002 aa21.54■■□□□ 1.04
PKP4-204ENST00000421462 FAM43AQ8N2R8 423 aa21.54■■□□□ 1.04
PKP4-204ENST00000421462 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
PKP4-204ENST00000421462 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
PKP4-204ENST00000421462 GZF1Q9H116 711 aaPredicted RBP21.54■■□□□ 1.04
PKP4-204ENST00000421462 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.043e-6■■■□□ 19.2
PKP4-204ENST00000421462 PLEKHH1Q9ULM0 1364 aa21.53■■□□□ 1.04
PKP4-204ENST00000421462 UHRF1BP1Q6BDS2 1440 aa21.52■■□□□ 1.04
PKP4-204ENST00000421462 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
PKP4-204ENST00000421462 IGHDP01880 384 aa21.5■■□□□ 1.03
PKP4-204ENST00000421462 RRAGDQ9NQL2 400 aaPredicted RBP21.5■■□□□ 1.03
PKP4-204ENST00000421462 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
PKP4-204ENST00000421462 FBLN2P98095 1184 aa21.49■■□□□ 1.03
PKP4-204ENST00000421462 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
PKP4-204ENST00000421462 KNSTRNQ9Y448 316 aa21.49■■□□□ 1.03
PKP4-204ENST00000421462 SPINK5Q9NQ38 1064 aaPredicted RBP21.48■■□□□ 1.03
PKP4-204ENST00000421462 TMF1P82094 1093 aa21.47■■□□□ 1.03
PKP4-204ENST00000421462 APAF1O14727 1248 aa21.46■■□□□ 1.03
PKP4-204ENST00000421462 NAP1L5Q96NT1 182 aaPredicted RBP21.46■■□□□ 1.03
PKP4-204ENST00000421462 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
PKP4-204ENST00000421462 BLMP54132 1417 aaPredicted RBP21.45■■□□□ 1.02
PKP4-204ENST00000421462 PPP2R1AP30153 589 aa21.44■■□□□ 1.02
PKP4-204ENST00000421462 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
PKP4-204ENST00000421462 NEUROD2Q15784 382 aa21.44■■□□□ 1.02
PKP4-204ENST00000421462 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
PKP4-204ENST00000421462 TESK2Q96S53 571 aa21.44■■□□□ 1.02
PKP4-204ENST00000421462 BECN1Q14457 450 aa21.43■■□□□ 1.02
PKP4-204ENST00000421462 ZMYM4Q5VZL5 1548 aa21.41■■□□□ 1.02
PKP4-204ENST00000421462 TROQ12816 1431 aaPredicted RBP21.41■■□□□ 1.02
PKP4-204ENST00000421462 USP19O94966 1318 aa21.4■■□□□ 1.02
PKP4-204ENST00000421462 SLFN5Q08AF3 891 aa21.4■■□□□ 1.02
PKP4-204ENST00000421462 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.02
PKP4-204ENST00000421462 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
PKP4-204ENST00000421462 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
PKP4-204ENST00000421462 PLB1Q6P1J6 1458 aa21.39■■□□□ 1.01
PKP4-204ENST00000421462 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
PKP4-204ENST00000421462 E9PCH4 1651 aa21.38■■□□□ 1.01
PKP4-204ENST00000421462 PANK2Q9BZ23 570 aa21.38■■□□□ 1.01
PKP4-204ENST00000421462 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
PKP4-204ENST00000421462 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
PKP4-204ENST00000421462 BCL2L13Q9BXK5 485 aa21.36■■□□□ 1.01
PKP4-204ENST00000421462 ARHGEF12Q9NZN5 1544 aa21.36■■□□□ 1.01
PKP4-204ENST00000421462 L1TD1Q5T7N2 865 aaKnown RBP21.34■■□□□ 1.01
PKP4-204ENST00000421462 CLUAP1Q96AJ1 413 aa21.34■■□□□ 1.01
PKP4-204ENST00000421462 ADGBQ8N7X0 1667 aa21.34■■□□□ 1.01
PKP4-204ENST00000421462 UPF2Q9HAU5 1272 aaKnown RBP21.34■■□□□ 1.01
PKP4-204ENST00000421462 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
PKP4-204ENST00000421462 DISP1Q96F81 1524 aa21.32■■□□□ 1
PKP4-204ENST00000421462 GOLGA6L3A6NEY3 463 aa21.32■■□□□ 1
PKP4-204ENST00000421462 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
PKP4-204ENST00000421462 ZNF608Q9ULD9 1512 aaPredicted RBP21.31■■□□□ 1
PKP4-204ENST00000421462 XRCC6P12956 609 aaKnown RBP eCLIP21.31■■□□□ 1
PKP4-204ENST00000421462 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
PKP4-204ENST00000421462 ADGRL2O95490 1459 aa21.31■■□□□ 1
PKP4-204ENST00000421462 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
PKP4-204ENST00000421462 COL17A1Q9UMD9 1497 aaPredicted RBP21.31■■□□□ 1
PKP4-204ENST00000421462 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
PKP4-204ENST00000421462 TNNQ9UQP3 1299 aa21.3■■□□□ 1
PKP4-204ENST00000421462 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
PKP4-204ENST00000421462 TBC1D2Q9BYX2 928 aa21.3■■□□□ 1
PKP4-204ENST00000421462 ZNF521Q96K83 1311 aa21.29■■□□□ 1
PKP4-204ENST00000421462 PBRM1Q86U86 1689 aa21.27■■□□□ 1
PKP4-204ENST00000421462 CENPJQ9HC77 1338 aaPredicted RBP21.27■■□□□ 1
PKP4-204ENST00000421462 KIAA0556O60303 1618 aa21.27■■□□□ 1
PKP4-204ENST00000421462 AMER1Q5JTC6 1135 aaPredicted RBP21.27■□□□□ 0.99
PKP4-204ENST00000421462 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
PKP4-204ENST00000421462 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
PKP4-204ENST00000421462 KDM5DQ9BY66 1539 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms