RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NUP155O75694 1391 aa31.75■■■□□ 2.67
ABCF3-202ENST00000421340 UNC13BO14795 1591 aa31.74■■■□□ 2.67
ABCF3-202ENST00000421340 CLSPNQ9HAW4 1339 aa31.74■■■□□ 2.67
ABCF3-202ENST00000421340 BCORL1Q5H9F3 1711 aa31.73■■■□□ 2.67
ABCF3-202ENST00000421340 MPHOSPH9Q99550 1183 aa31.73■■■□□ 2.67
ABCF3-202ENST00000421340 AGLP35573 1532 aa31.71■■■□□ 2.67
ABCF3-202ENST00000421340 DEPDC5O75140 1603 aa31.68■■■□□ 2.66
ABCF3-202ENST00000421340 PZPP20742 1482 aa31.68■■■□□ 2.66
ABCF3-202ENST00000421340 SLC4A1APQ9BWU0 796 aaKnown RBP31.67■■■□□ 2.66
ABCF3-202ENST00000421340 KANK1Q14678 1352 aa31.66■■■□□ 2.66
ABCF3-202ENST00000421340 RNF17Q9BXT8 1623 aaKnown RBP31.65■■■□□ 2.66
ABCF3-202ENST00000421340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.65■■■□□ 2.66
ABCF3-202ENST00000421340 PPP6R1Q9UPN7 881 aa31.63■■■□□ 2.65
ABCF3-202ENST00000421340 PRDM15P57071 1507 aaPredicted RBP31.63■■■□□ 2.65
ABCF3-202ENST00000421340 VWDEQ8N2E2 1590 aa31.62■■■□□ 2.65
ABCF3-202ENST00000421340 FAM135AQ9P2D6 1515 aa31.61■■■□□ 2.65
ABCF3-202ENST00000421340 IQGAP3Q86VI3 1631 aa31.6■■■□□ 2.65
ABCF3-202ENST00000421340 MROH1Q8NDA8 1641 aa31.6■■■□□ 2.65
ABCF3-202ENST00000421340 GGT6Q6P531 493 aa31.58■■■□□ 2.65
ABCF3-202ENST00000421340 PKD2Q13563 968 aa31.56■■■□□ 2.64
ABCF3-202ENST00000421340 LMTK2Q8IWU2 1503 aa31.54■■■□□ 2.64
ABCF3-202ENST00000421340 WASHC2CQ9Y4E1 1318 aa31.49■■■□□ 2.63
ABCF3-202ENST00000421340 ANKRD30BQ9BXX2 1392 aa31.47■■■□□ 2.63
ABCF3-202ENST00000421340 ZEB1P37275 1124 aaPredicted RBP31.47■■■□□ 2.63
ABCF3-202ENST00000421340 SIGLEC1Q9BZZ2 1709 aa31.46■■■□□ 2.63
ABCF3-202ENST00000421340 ARID4BQ4LE39 1312 aaPredicted RBP31.46■■■□□ 2.63
ABCF3-202ENST00000421340 ABCC3O15438 1527 aa31.44■■■□□ 2.62
ABCF3-202ENST00000421340 TET3O43151 1660 aa31.44■■■□□ 2.62
ABCF3-202ENST00000421340 FOXD1Q16676 465 aa31.43■■■□□ 2.62
ABCF3-202ENST00000421340 ZC3H13Q5T200 1668 aaKnown RBP31.41■■■□□ 2.62
ABCF3-202ENST00000421340 ARHGAP31Q2M1Z3 1444 aa31.39■■■□□ 2.62
ABCF3-202ENST00000421340 RPRD2Q5VT52 1461 aaKnown RBP31.39■■■□□ 2.62
ABCF3-202ENST00000421340 EFCAB6Q5THR3 1501 aa31.38■■■□□ 2.61
ABCF3-202ENST00000421340 MLECQ14165 292 aa31.36■■■□□ 2.61
ABCF3-202ENST00000421340 PTPRTO14522 1441 aa31.34■■■□□ 2.61
ABCF3-202ENST00000421340 TIMELESSQ9UNS1 1208 aa31.34■■■□□ 2.61
ABCF3-202ENST00000421340 SIN3AQ96ST3 1273 aa31.33■■■□□ 2.61
ABCF3-202ENST00000421340 ESF1Q9H501 851 aaKnown RBP31.33■■■□□ 2.61
ABCF3-202ENST00000421340 CNTLNQ9NXG0 1405 aa31.32■■■□□ 2.61
ABCF3-202ENST00000421340 E9PCH4 1651 aa31.32■■■□□ 2.6
ABCF3-202ENST00000421340 CEP152O94986 1710 aa31.32■■■□□ 2.6
ABCF3-202ENST00000421340 PLA2R1Q13018 1463 aa31.31■■■□□ 2.6
ABCF3-202ENST00000421340 NPATQ14207 1427 aa31.31■■■□□ 2.6
ABCF3-202ENST00000421340 CAMSAP1Q5T5Y3 1602 aa31.29■■■□□ 2.6
ABCF3-202ENST00000421340 NEUROD1Q13562 356 aa31.26■■■□□ 2.59
ABCF3-202ENST00000421340 CCDC144AA2RUR9 1427 aa31.23■■■□□ 2.59
ABCF3-202ENST00000421340 ZMYM3Q14202 1370 aa31.22■■■□□ 2.59
ABCF3-202ENST00000421340 TRPM2O94759 1503 aa31.22■■■□□ 2.59
ABCF3-202ENST00000421340 NOS1P29475 1434 aa31.22■■■□□ 2.59
ABCF3-202ENST00000421340 CLTCQ00610 1675 aaKnown RBP31.2■■■□□ 2.59
ABCF3-202ENST00000421340 SPHKAPQ2M3C7 1700 aa31.16■■■□□ 2.58
ABCF3-202ENST00000421340 MROH2AA6NES4 1674 aa31.16■■■□□ 2.58
ABCF3-202ENST00000421340 TONSLQ96HA7 1378 aa31.14■■■□□ 2.58
ABCF3-202ENST00000421340 SLC52A1Q9NWF4 448 aa31.12■■■□□ 2.57
ABCF3-202ENST00000421340 ERVK-7P63135 1459 aa31.11■■■□□ 2.57
ABCF3-202ENST00000421340 FBXO31Q5XUX0 539 aaPredicted RBP31.1■■■□□ 2.57
ABCF3-202ENST00000421340 ADAMTSL3P82987 1691 aa31.09■■■□□ 2.57
ABCF3-202ENST00000421340 SPATA31D1Q6ZQQ2 1576 aa31.09■■■□□ 2.57
ABCF3-202ENST00000421340 FER1L4A9Z1Z3 1794 aa31.07■■■□□ 2.56
ABCF3-202ENST00000421340 PREX1Q8TCU6 1659 aa31.06■■■□□ 2.56
ABCF3-202ENST00000421340 NEURL4Q96JN8 1562 aa31.05■■■□□ 2.56
ABCF3-202ENST00000421340 L3MBTL2Q969R5 705 aa31.04■■■□□ 2.56
ABCF3-202ENST00000421340 CLTCL1P53675 1640 aa31.04■■■□□ 2.56
ABCF3-202ENST00000421340 SYNMO15061 1565 aa31.04■■■□□ 2.56
ABCF3-202ENST00000421340 SPATA31E1Q6ZUB1 1445 aa31.03■■■□□ 2.56
ABCF3-202ENST00000421340 PPP1R15AO75807 674 aaPredicted RBP31.02■■■□□ 2.56
ABCF3-202ENST00000421340 MADDQ8WXG6 1647 aa31.02■■■□□ 2.56
ABCF3-202ENST00000421340 IDI1Q13907 227 aa31.01■■■□□ 2.55
ABCF3-202ENST00000421340 PIK3C2BO00750 1634 aa31.01■■■□□ 2.55
ABCF3-202ENST00000421340 STAC3Q96MF2 364 aa30.99■■■□□ 2.55
ABCF3-202ENST00000421340 UGGT1Q9NYU2 1555 aa30.97■■■□□ 2.55
ABCF3-202ENST00000421340 TNRQ92752 1358 aa30.97■■■□□ 2.55
ABCF3-202ENST00000421340 CEBPAP49715 358 aaPredicted RBP30.96■■■□□ 2.55
ABCF3-202ENST00000421340 C3P01024 1663 aa30.95■■■□□ 2.55
ABCF3-202ENST00000421340 CFAP65Q6ZU64 1925 aaKnown RBP30.93■■■□□ 2.54
ABCF3-202ENST00000421340 RGL3Q3MIN7 710 aa30.92■■■□□ 2.54
ABCF3-202ENST00000421340 RIMS1Q86UR5 1692 aaKnown RBP30.92■■■□□ 2.54
ABCF3-202ENST00000421340 ADGRB3O60242 1522 aa30.91■■■□□ 2.54
ABCF3-202ENST00000421340 RPGRIP1LQ68CZ1 1315 aa30.91■■■□□ 2.54
ABCF3-202ENST00000421340 KIF1BO60333 1816 aa30.89■■■□□ 2.53
ABCF3-202ENST00000421340 NLRP1Q9C000 1473 aa30.89■■■□□ 2.53
ABCF3-202ENST00000421340 DCAF11Q8TEB1 546 aa30.88■■■□□ 2.53
ABCF3-202ENST00000421340 CHGAP10645 457 aaKnown RBP30.86■■■□□ 2.53
ABCF3-202ENST00000421340 PTPRMP28827 1452 aa30.85■■■□□ 2.53
ABCF3-202ENST00000421340 UHRF1BP1Q6BDS2 1440 aa30.84■■■□□ 2.53
ABCF3-202ENST00000421340 TMEM131LA2VDJ0 1609 aa30.82■■■□□ 2.52
ABCF3-202ENST00000421340 ZNF326Q5BKZ1 582 aaKnown RBP30.81■■■□□ 2.52
ABCF3-202ENST00000421340 STAG3Q9UJ98 1225 aa30.81■■■□□ 2.52
ABCF3-202ENST00000421340 KDM5AP29375 1690 aaKnown RBP30.78■■■□□ 2.52
ABCF3-202ENST00000421340 A2ML1A8K2U0 1454 aa30.78■■■□□ 2.52
ABCF3-202ENST00000421340 KDM4FA0A1W2PPD8 638 aa30.78■■■□□ 2.52
ABCF3-202ENST00000421340 KDM2AQ9Y2K7 1162 aa30.78■■■□□ 2.52
ABCF3-202ENST00000421340 NBPF8Q3BBV2 869 aa30.76■■■□□ 2.51
ABCF3-202ENST00000421340 PLPPR3Q6T4P5 718 aa30.76■■■□□ 2.51
ABCF3-202ENST00000421340 MYOM2P54296 1465 aa30.76■■■□□ 2.51
ABCF3-202ENST00000421340 VGFO15240 615 aaPredicted RBP30.74■■■□□ 2.51
ABCF3-202ENST00000421340 ZFYVE9O95405 1425 aa30.73■■■□□ 2.51
ABCF3-202ENST00000421340 PRAG1Q86YV5 1406 aa30.73■■■□□ 2.51
ABCF3-202ENST00000421340 HDGFP51858 240 aaKnown RBP30.71■■■□□ 2.51
ABCF3-202ENST00000421340 NRXN1Q9ULB1 1477 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms