RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 CCDC144AA2RUR9 1427 aa36.4■■■■□ 3.42
FOXA2-202ENST00000419308 ZCCHC11Q5TAX3 1644 aaKnown RBP36.39■■■■□ 3.42
FOXA2-202ENST00000419308 ROCK2O75116 1388 aaKnown RBP36.38■■■■□ 3.42
FOXA2-202ENST00000419308 ZBED9Q6R2W3 1325 aa36.38■■■■□ 3.41
FOXA2-202ENST00000419308 PLCH2O75038 1416 aa36.36■■■■□ 3.41
FOXA2-202ENST00000419308 PLA2R1Q13018 1463 aa36.36■■■■□ 3.41
FOXA2-202ENST00000419308 ST20-MTHFSA0A0A6YYL1 179 aa36.36■■■■□ 3.41
FOXA2-202ENST00000419308 UHRF1BP1LA0JNW5 1464 aa36.35■■■■□ 3.41
FOXA2-202ENST00000419308 IQGAP3Q86VI3 1631 aa36.35■■■■□ 3.41
FOXA2-202ENST00000419308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.35■■■■□ 3.415e-8■□□□□ 8.5
FOXA2-202ENST00000419308 DUOX2Q9NRD8 1548 aa36.33■■■■□ 3.41
FOXA2-202ENST00000419308 PRAG1Q86YV5 1406 aa36.31■■■■□ 3.4
FOXA2-202ENST00000419308 TRPM1Q7Z4N2 1603 aa36.29■■■■□ 3.4
FOXA2-202ENST00000419308 EFCAB2Q5VUJ9 269 aa36.28■■■■□ 3.4
FOXA2-202ENST00000419308 CNGB1Q14028 1251 aaPredicted RBP36.27■■■■□ 3.4
FOXA2-202ENST00000419308 MAGI2Q86UL8 1455 aa36.27■■■■□ 3.4
FOXA2-202ENST00000419308 ERBINQ96RT1 1412 aa36.27■■■■□ 3.4
FOXA2-202ENST00000419308 ABCC1P33527 1531 aa36.25■■■■□ 3.39
FOXA2-202ENST00000419308 IRX6P78412 446 aaPredicted RBP36.25■■■■□ 3.39
FOXA2-202ENST00000419308 RGL3Q3MIN7 710 aa36.24■■■■□ 3.39
FOXA2-202ENST00000419308 A2MP01023 1474 aa36.23■■■■□ 3.39
FOXA2-202ENST00000419308 ATP10AO60312 1499 aa36.2■■■■□ 3.39
FOXA2-202ENST00000419308 TRAPPC8Q9Y2L5 1435 aa36.19■■■■□ 3.38
FOXA2-202ENST00000419308 E9PCH4 1651 aa36.17■■■■□ 3.38
FOXA2-202ENST00000419308 GPRASP1Q5JY77 1395 aa36.17■■■■□ 3.38
FOXA2-202ENST00000419308 NBPF1Q3BBV0 1214 aa36.15■■■■□ 3.38
FOXA2-202ENST00000419308 ERICH6BQ5W0A0 696 aa36.15■■■■□ 3.38
FOXA2-202ENST00000419308 LAMC1P11047 1609 aa36.1■■■■□ 3.37
FOXA2-202ENST00000419308 PNISRQ8TF01 805 aaKnown RBP36.09■■■■□ 3.37
FOXA2-202ENST00000419308 ARAP3Q8WWN8 1544 aa36.09■■■■□ 3.37
FOXA2-202ENST00000419308 KTN1Q86UP2 1357 aaKnown RBP36.07■■■■□ 3.37
FOXA2-202ENST00000419308 PRDM15P57071 1507 aaPredicted RBP36.07■■■■□ 3.36
FOXA2-202ENST00000419308 TMC1Q8TDI8 760 aa36.06■■■■□ 3.36
FOXA2-202ENST00000419308 EIF2AK4Q9P2K8 1649 aaKnown RBP36.06■■■■□ 3.36
FOXA2-202ENST00000419308 SPAG9O60271 1321 aaKnown RBP36.05■■■■□ 3.36
FOXA2-202ENST00000419308 RTEL1-TNFRSF6BF6WH68 1400 aa36.04■■■■□ 3.36
FOXA2-202ENST00000419308 RALBP1Q15311 655 aa36.03■■■■□ 3.36
FOXA2-202ENST00000419308 SMG6Q86US8 1419 aaKnown RBP36.02■■■■□ 3.36
FOXA2-202ENST00000419308 AFAP1Q8N556 730 aa36.02■■■■□ 3.36
FOXA2-202ENST00000419308 ZFYVE16Q7Z3T8 1539 aa36.02■■■■□ 3.36
FOXA2-202ENST00000419308 MYBBP1AQ9BQG0 1328 aaKnown RBP36.02■■■■□ 3.36
FOXA2-202ENST00000419308 PPP4R2Q9NY27 417 aa36■■■■□ 3.35
FOXA2-202ENST00000419308 BRD4O60885 1362 aaPredicted RBP35.99■■■■□ 3.35
FOXA2-202ENST00000419308 COL17A1Q9UMD9 1497 aaPredicted RBP35.98■■■■□ 3.35
FOXA2-202ENST00000419308 WDR7Q9Y4E6 1490 aa35.98■■■■□ 3.35
FOXA2-202ENST00000419308 RBM19Q9Y4C8 960 aaKnown RBP35.98■■■■□ 3.35
FOXA2-202ENST00000419308 TESK2Q96S53 571 aa35.97■■■■□ 3.35
FOXA2-202ENST00000419308 LRPPRCP42704 1394 aaKnown RBP35.96■■■■□ 3.35
FOXA2-202ENST00000419308 MYT1Q01538 1121 aa35.95■■■■□ 3.35
FOXA2-202ENST00000419308 NUDCQ9Y266 331 aa35.93■■■■□ 3.34
FOXA2-202ENST00000419308 DISP3Q9P2K9 1392 aa35.92■■■■□ 3.34
FOXA2-202ENST00000419308 ABCA9Q8IUA7 1624 aa35.91■■■■□ 3.34
FOXA2-202ENST00000419308 RNF17Q9BXT8 1623 aaKnown RBP35.91■■■■□ 3.34
FOXA2-202ENST00000419308 PER1O15534 1290 aaPredicted RBP35.91■■■■□ 3.34
FOXA2-202ENST00000419308 PARD3Q8TEW0 1356 aa35.9■■■■□ 3.34
FOXA2-202ENST00000419308 DEPDC5O75140 1603 aa35.9■■■■□ 3.34
FOXA2-202ENST00000419308 FANCAO15360 1455 aa35.89■■■■□ 3.34
FOXA2-202ENST00000419308 TRPM2O94759 1503 aa35.89■■■■□ 3.34
FOXA2-202ENST00000419308 ATP7AQ04656 1500 aa35.86■■■■□ 3.33
FOXA2-202ENST00000419308 INO80Q9ULG1 1556 aaPredicted RBP35.85■■■■□ 3.33
FOXA2-202ENST00000419308 PTPRTO14522 1441 aa35.84■■■■□ 3.33
FOXA2-202ENST00000419308 SPHKAPQ2M3C7 1700 aa35.84■■■■□ 3.33
FOXA2-202ENST00000419308 NLRP13Q86W25 1043 aa35.83■■■■□ 3.33
FOXA2-202ENST00000419308 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
FOXA2-202ENST00000419308 SENP3-EIF4A1A0A087X0R7 540 aa35.83■■■■□ 3.33
FOXA2-202ENST00000419308 CEP152O94986 1710 aa35.81■■■■□ 3.32
FOXA2-202ENST00000419308 TMF1P82094 1093 aa35.81■■■■□ 3.32
FOXA2-202ENST00000419308 TET3O43151 1660 aa35.8■■■■□ 3.32
FOXA2-202ENST00000419308 RNF123Q5XPI4 1314 aa35.79■■■■□ 3.32
FOXA2-202ENST00000419308 WASHC2CQ9Y4E1 1318 aa35.79■■■■□ 3.32
FOXA2-202ENST00000419308 CLTCL1P53675 1640 aa35.78■■■■□ 3.32
FOXA2-202ENST00000419308 ADGRL1O94910 1474 aa35.77■■■■□ 3.32
FOXA2-202ENST00000419308 VWDEQ8N2E2 1590 aa35.77■■■■□ 3.32
FOXA2-202ENST00000419308 B4GALNT3Q6L9W6 998 aa35.77■■■■□ 3.32
FOXA2-202ENST00000419308 SCAPERQ9BY12 1400 aa35.75■■■■□ 3.31
FOXA2-202ENST00000419308 PANK3Q9H999 370 aa35.75■■■■□ 3.31
FOXA2-202ENST00000419308 KANK1Q14678 1352 aa35.74■■■■□ 3.31
FOXA2-202ENST00000419308 IQGAP1P46940 1657 aa35.73■■■■□ 3.31
FOXA2-202ENST00000419308 ASXL2Q76L83 1435 aa35.72■■■■□ 3.31
FOXA2-202ENST00000419308 STAC3Q96MF2 364 aa35.72■■■■□ 3.31
FOXA2-202ENST00000419308 KIF3BO15066 747 aa35.71■■■■□ 3.31
FOXA2-202ENST00000419308 CC2D1BQ5T0F9 858 aaKnown RBP35.69■■■■□ 3.3
FOXA2-202ENST00000419308 MYT1LQ9UL68 1186 aa35.68■■■■□ 3.3
FOXA2-202ENST00000419308 MROH1Q8NDA8 1641 aa35.66■■■■□ 3.3
FOXA2-202ENST00000419308 SCAF11Q99590 1463 aaKnown RBP35.63■■■■□ 3.29
FOXA2-202ENST00000419308 NEURL4Q96JN8 1562 aa35.6■■■■□ 3.29
FOXA2-202ENST00000419308 KIDINS220Q9ULH0 1771 aa35.58■■■■□ 3.29
FOXA2-202ENST00000419308 ANP32EQ9BTT0 268 aa35.58■■■■□ 3.29
FOXA2-202ENST00000419308 KIAA1210Q9ULL0 1709 aa35.54■■■■□ 3.28
FOXA2-202ENST00000419308 INSRP06213 1382 aa35.54■■■■□ 3.28
FOXA2-202ENST00000419308 ZMYM4Q5VZL5 1548 aa35.53■■■■□ 3.28
FOXA2-202ENST00000419308 UGGT1Q9NYU2 1555 aa35.53■■■■□ 3.28
FOXA2-202ENST00000419308 EFCAB6Q5THR3 1501 aa35.52■■■■□ 3.28
FOXA2-202ENST00000419308 SALL2Q9Y467 1007 aaPredicted RBP35.52■■■■□ 3.28
FOXA2-202ENST00000419308 ZNF518AQ6AHZ1 1483 aa35.51■■■■□ 3.28
FOXA2-202ENST00000419308 PDE3BQ13370 1112 aa35.51■■■■□ 3.28
FOXA2-202ENST00000419308 CDCA8Q53HL2 280 aa35.51■■■■□ 3.28
FOXA2-202ENST00000419308 BLMP54132 1417 aaPredicted RBP35.5■■■■□ 3.27
FOXA2-202ENST00000419308 SYNMO15061 1565 aa35.49■■■■□ 3.27
FOXA2-202ENST00000419308 FANCIQ9NVI1 1328 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms