RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
RBM39-208ENST00000416108 IQGAP3Q86VI3 1631 aa12.39□□□□□ -0.43
RBM39-208ENST00000416108 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
RBM39-208ENST00000416108 CEP152O94986 1710 aa12.38□□□□□ -0.43
RBM39-208ENST00000416108 KIF3BO15066 747 aa12.37□□□□□ -0.43
RBM39-208ENST00000416108 KANK1Q14678 1352 aa12.37□□□□□ -0.43
RBM39-208ENST00000416108 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
RBM39-208ENST00000416108 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
RBM39-208ENST00000416108 NUP155O75694 1391 aa12.36□□□□□ -0.43
RBM39-208ENST00000416108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.434e-22■■□□□ 11.6
RBM39-208ENST00000416108 AGLP35573 1532 aa12.36□□□□□ -0.43
RBM39-208ENST00000416108 DHX57Q6P158 1386 aaKnown RBP12.35□□□□□ -0.43
RBM39-208ENST00000416108 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
RBM39-208ENST00000416108 TET3O43151 1660 aa12.35□□□□□ -0.43
RBM39-208ENST00000416108 MROH1Q8NDA8 1641 aa12.34□□□□□ -0.43
RBM39-208ENST00000416108 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
RBM39-208ENST00000416108 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
RBM39-208ENST00000416108 PZPP20742 1482 aa12.33□□□□□ -0.44
RBM39-208ENST00000416108 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
RBM39-208ENST00000416108 CAMSAP1Q5T5Y3 1602 aa12.32□□□□□ -0.44
RBM39-208ENST00000416108 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
RBM39-208ENST00000416108 GGT6Q6P531 493 aa12.31□□□□□ -0.44
RBM39-208ENST00000416108 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
RBM39-208ENST00000416108 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
RBM39-208ENST00000416108 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
RBM39-208ENST00000416108 E9PCH4 1651 aa12.3□□□□□ -0.44
RBM39-208ENST00000416108 SPHKAPQ2M3C7 1700 aa12.3□□□□□ -0.44
RBM39-208ENST00000416108 FER1L4A9Z1Z3 1794 aa12.3□□□□□ -0.44
RBM39-208ENST00000416108 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
RBM39-208ENST00000416108 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
RBM39-208ENST00000416108 ABCC3O15438 1527 aa12.27□□□□□ -0.44
RBM39-208ENST00000416108 EFCAB6Q5THR3 1501 aa12.27□□□□□ -0.44
RBM39-208ENST00000416108 LMTK2Q8IWU2 1503 aa12.27□□□□□ -0.44
RBM39-208ENST00000416108 MLECQ14165 292 aa12.27□□□□□ -0.45
RBM39-208ENST00000416108 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.45
RBM39-208ENST00000416108 PKD2Q13563 968 aa12.26□□□□□ -0.45
RBM39-208ENST00000416108 MROH2AA6NES4 1674 aa12.26□□□□□ -0.45
RBM39-208ENST00000416108 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
RBM39-208ENST00000416108 KIF1BO60333 1816 aa12.24□□□□□ -0.45
RBM39-208ENST00000416108 ZEB1P37275 1124 aaPredicted RBP12.24□□□□□ -0.45
RBM39-208ENST00000416108 PREX1Q8TCU6 1659 aa12.23□□□□□ -0.45
RBM39-208ENST00000416108 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
RBM39-208ENST00000416108 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
RBM39-208ENST00000416108 FOXD1Q16676 465 aa12.22□□□□□ -0.45
RBM39-208ENST00000416108 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
RBM39-208ENST00000416108 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
RBM39-208ENST00000416108 TRPM2O94759 1503 aa12.2□□□□□ -0.46
RBM39-208ENST00000416108 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
RBM39-208ENST00000416108 C3P01024 1663 aa12.19□□□□□ -0.46
RBM39-208ENST00000416108 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
RBM39-208ENST00000416108 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
RBM39-208ENST00000416108 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
RBM39-208ENST00000416108 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
RBM39-208ENST00000416108 NPATQ14207 1427 aa12.18□□□□□ -0.46
RBM39-208ENST00000416108 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
RBM39-208ENST00000416108 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
RBM39-208ENST00000416108 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
RBM39-208ENST00000416108 PTPRTO14522 1441 aa12.15□□□□□ -0.46
RBM39-208ENST00000416108 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
RBM39-208ENST00000416108 SPATA31D1Q6ZQQ2 1576 aa12.14□□□□□ -0.47
RBM39-208ENST00000416108 MYO5BQ9ULV0 1848 aa12.14□□□□□ -0.47
RBM39-208ENST00000416108 PIK3C2BO00750 1634 aa12.14□□□□□ -0.47
RBM39-208ENST00000416108 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
RBM39-208ENST00000416108 SYNMO15061 1565 aa12.13□□□□□ -0.47
RBM39-208ENST00000416108 NOS1P29475 1434 aa12.12□□□□□ -0.47
RBM39-208ENST00000416108 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
RBM39-208ENST00000416108 PLA2R1Q13018 1463 aa12.12□□□□□ -0.47
RBM39-208ENST00000416108 SETD1BQ9UPS6 1966 aaKnown RBP12.11□□□□□ -0.47
RBM39-208ENST00000416108 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
RBM39-208ENST00000416108 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
RBM39-208ENST00000416108 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
RBM39-208ENST00000416108 IFT172Q9UG01 1749 aa12.08□□□□□ -0.47
RBM39-208ENST00000416108 TNRQ92752 1358 aa12.08□□□□□ -0.48
RBM39-208ENST00000416108 PPLO60437 1756 aa12.08□□□□□ -0.48
RBM39-208ENST00000416108 KDM5AP29375 1690 aaKnown RBP12.08□□□□□ -0.48
RBM39-208ENST00000416108 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
RBM39-208ENST00000416108 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
RBM39-208ENST00000416108 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
RBM39-208ENST00000416108 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
RBM39-208ENST00000416108 ADGRB3O60242 1522 aa12.07□□□□□ -0.48
RBM39-208ENST00000416108 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
RBM39-208ENST00000416108 TMEM131LA2VDJ0 1609 aa12.06□□□□□ -0.48
RBM39-208ENST00000416108 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
RBM39-208ENST00000416108 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
RBM39-208ENST00000416108 RGL3Q3MIN7 710 aa12.05□□□□□ -0.48
RBM39-208ENST00000416108 ZNF326Q5BKZ1 582 aaKnown RBP12.05□□□□□ -0.48
RBM39-208ENST00000416108 NLRP1Q9C000 1473 aa12.05□□□□□ -0.48
RBM39-208ENST00000416108 SPATA31E1Q6ZUB1 1445 aa12.04□□□□□ -0.48
RBM39-208ENST00000416108 PTPRMP28827 1452 aa12.04□□□□□ -0.48
RBM39-208ENST00000416108 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
RBM39-208ENST00000416108 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
RBM39-208ENST00000416108 IDI1Q13907 227 aa12.03□□□□□ -0.48
RBM39-208ENST00000416108 CEP170BQ9Y4F5 1589 aaPredicted RBP12.01□□□□□ -0.49
RBM39-208ENST00000416108 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
RBM39-208ENST00000416108 PPP1R15AO75807 674 aaPredicted RBP12□□□□□ -0.49
RBM39-208ENST00000416108 STAC3Q96MF2 364 aa12□□□□□ -0.49
RBM39-208ENST00000416108 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
RBM39-208ENST00000416108 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
RBM39-208ENST00000416108 A2ML1A8K2U0 1454 aa12□□□□□ -0.49
RBM39-208ENST00000416108 MYOM2P54296 1465 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms